| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,104,210 | A→T | 7.0% | D232V (GAC→GTC) | PP_2714 → | sensor histidine kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,104,210 | 0 | A | T | 7.0% | 216.0 / 7.2 | 71 | D232V (GAC→GTC) | PP_2714 | sensor histidine kinase |
| Reads supporting (aligned to +/- strand): ref base A (38/28); new base T (3/2); total (41/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.01e-01 | |||||||||||
GATCGGCTGGGGGCTGCGGCCACTGCAGAACATGGCCAATGTCATCCGCAGGCGTCATGCAGATTCGCTGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGCGCTGGCCGCCAGCAATGATGCCGAGCGCCAGAAAGCCCTGGGCTTTCTTGTGGG > NC_002947/3104061‑3104357 | taTCGGCTGGGGGCTGCGGCAACTGCAGAACATCGCCAATGTCATCCGCCGGCGTCATGCAGATTCGCTGGCGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATcga < 2:1349381/149‑1 (MQ=255)gATCGGCTGGGGGCTGCGGCCACTGCAGAACATGGCCAATGTCATCCGCAGGCGTCATGCAGATTCGCTGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATcga < 2:713286/150‑1 (MQ=255) aTCGGCTGGGGGCTGCGGCCACTGCAGAACATGGCCAATGTCATCCGCAGGCGTCATGCAGATTCGCTGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATcgac < 2:580391/150‑1 (MQ=255) tCGGCTGGGGGCTGCGGCCACTGCGGAACATGGCCAATGTCATCCGCAGGCGTCATGCAGATTCGCTGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGTAAACCGCCATCAATCGCTTGCTGGCGCAGATcgacg > 2:1095813/1‑150 (MQ=255) gCTGGGGGCTGCGGCCACTGCAGAACATGGCCAATGTCATCCGCAGGCGTCATGCAGATTCGCTGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATc < 1:739671/150‑1 (MQ=255) ggCCACTGCAGAACATGGCCAATGTCATCCGCAGGCGTCATGCAGATTCGCTGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTg < 2:184104/150‑1 (MQ=255) ccACTGCAGAACATGGCCAATGTCATCCGCAGGCGTCATGCAGATTCGCTGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGaa > 2:209131/1‑150 (MQ=255) ccACTGCAGAACATGGCCAATGTCATCCGCAGGCGTCATGCAGATTCGCTGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGaa < 1:226383/150‑1 (MQ=255) cACTGCAGAACATGGCCAATGTCATCCGCAGGCGTCATGCAGATTCGCTGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAAc < 1:209131/150‑1 (MQ=255) aCTGCAGAACATGGCCAATGTCATCCGCAGGCGTCATGCAGATTCGCTGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTTCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACa > 1:577089/1‑150 (MQ=255) aCTGCAGAACATGGCCAATGTCATACGCAGGCGTCATGCAGATTCGCTGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACa > 1:1839360/1‑150 (MQ=255) tGGCCAATGTCATCCGCAGGCGTCATGCAGATTCGCTGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTg > 2:368477/1‑150 (MQ=255) ggCCAATGTCATCCGCAGGCGTCATGCAGATTCGCTGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGc > 2:422110/1‑150 (MQ=255) ccAATGTCATCCGCAGGCGTCATGCAGATTCGCTGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCg < 1:368477/150‑1 (MQ=255) aaTGTCATCCGCAGGCGTCATGCAGATTCGCTGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGAt > 2:1141301/1‑150 (MQ=255) tCATCCGCAGGCGTCATGCAGATTCGCTGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGAtgctg < 1:1289447/150‑1 (MQ=255) cATCCGCAGGCGTCATGCAGATTCGCTGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGAtgctgc < 1:422110/150‑1 (MQ=255) aTCCGCAGGCGTCATGCAGATTCGCTGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGcc < 2:577089/150‑1 (MQ=255) tCCGCAGGCGTCATGCAGATTCGCTGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGccc > 2:1084313/1‑150 (MQ=255) cGCAGGCGTCATGCAGATTCGCTGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCAc > 2:1069368/1‑150 (MQ=255) gCAGATTCGCTGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACg > 2:59656/1‑150 (MQ=255) gCAGATTCGCTGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCAGATCCTGCCAACGAAGTGCGtgcc > 2:870839/1‑147 (MQ=255) cGCTGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTgg > 2:1884302/1‑150 (MQ=255) tGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGc < 1:218994/115‑1 (MQ=255) tGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGc > 2:218994/1‑115 (MQ=255) tGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCg > 2:184217/1‑150 (MQ=255) ggAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGAtgctgc > 2:1206732/1‑123 (MQ=255) ggAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGAtgctgc < 1:1206732/123‑1 (MQ=255) gCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTgcg > 1:1831687/1‑150 (MQ=255) gCTGCAACTGGTACCGCTTCAAACTGAAATGGAGCCCATGCAGGAGGCCATCAATAGCTTGCTGGCGAAGATCGACGATATGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTgcg > 2:91674/1‑150 (MQ=255) aCTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGaa < 1:1288629/118‑1 (MQ=255) aCTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGaa > 2:1288629/1‑118 (MQ=255) aCTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCCGCa > 1:1283723/1‑150 (MQ=255) tGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGc < 2:1847069/126‑1 (MQ=255) tGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGc > 1:1847069/1‑126 (MQ=255) tACNGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACgcgc > 2:1188789/1‑150 (MQ=255) tACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACgcgc < 2:1429417/150‑1 (MQ=255) tCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAAcgc > 1:372413/1‑150 (MQ=255) cccACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCTTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAAcgcg > 2:1688909/1‑150 (MQ=255) aCTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGCGCTg < 2:1831687/150‑1 (MQ=255) cTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGCGCTgg < 1:184217/150‑1 (MQ=255) tGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGCGCTGgc > 1:1902067/1‑150 (MQ=255) tGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGCGCTGgc > 2:1538836/1‑150 (MQ=255) aaCTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGCAGTTCGTACGCCTCTGGCGGTCTTGCG‑CCTGCACGCGCAGAACGCGCTGgccg > 2:990378/1‑150 (MQ=255) gAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGCGCTGGccgcccgc > 1:1811002/1‑150 (MQ=255) ccATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGCGCTGGCCGCCAGCAatg > 1:29659/1‑150 (MQ=255) ccATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGCGCTGGCCGCCAGCAatg > 1:1693503/1‑150 (MQ=255) cATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATctgc < 2:1689729/47‑1 (MQ=255) cATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATctgc > 1:1689729/1‑47 (MQ=255) aTGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAAcgcg > 2:230948/1‑132 (MQ=255) aTGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAAcgcg < 1:230948/132‑1 (MQ=255) aTGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGCGCTGGCCGCCAGCAatgat > 1:1694434/1‑150 (MQ=255) aGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGAGCTGGCCGCCAGCAATGATGCCg > 2:488802/1‑150 (MQ=255) ggcggcCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGCGCTGGCCGCCAGCAATGATGCCGa < 1:1656714/150‑1 (MQ=255) ggcCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGCGCTGGCCGCCAGCAatgatg < 1:1084910/143‑1 (MQ=255) ggcCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGCGCTGGCCGCCAGCAatgatg > 2:1084910/1‑143 (MQ=255) cAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGCGCTGGCCGCCAGCAATGATGCCGAGCGCCAGaa < 1:248665/150‑1 (MQ=255) cAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGCGCTGGCCGCCAGCAATGATGCCGAGCGCCAGaa < 1:251199/150‑1 (MQ=255) gCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTCCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGCGCTGGCCGCCAGCACTGATGCCGCGCGCCAGAAAGccc > 1:1580944/1‑150 (MQ=255) tGCTGGCGCAGATCGACGATCTGCTGCGGCTTGAACATCGCTTCATTGCCGATGCTGCCCACGAGATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGCGCTGGCCGCCAGCAATGATGCCGAGCGCCAGAAAGCCCTgg < 1:1688909/150‑1 (MQ=255) cTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGCGCTGGCCGCCAGCAATGATGCCGAGCGCCAGAAAGCGCTGGGc > 1:1908712/1‑150 (MQ=255) tGGCGCAGATCGACGATCTGCTGCGGCGTGCCACTCAGGCCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGGATTGCG‑CCTGCACGCGCAGAACGCGCTGGCCGCCAGCAATGATGCCGAGCGCCAGAAAGCCCTGGGCt < 2:1096753/150‑1 (MQ=255) cgcagcAGATCGTCGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGCGCTGGCCGCCAGCAATGATGCCGAGCGCCAGAAAGCCCTgggtt < 2:1062258/146‑3 (MQ=255) cgcagcAGATCGTCGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGCGCTGGCCGCCAGCAATGATGCCGAGCGCCAGAAAGCCCTgggtt > 1:1062258/5‑148 (MQ=255) gcagcAGATCGTCGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGCGCTGGCCGCCAGCAATGATGCCGAGCGCCAGAAAGCCCTGGGCtt > 1:1092099/4‑150 (MQ=255) cagcAGATCGTCGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑cc > 1:1362925/3‑88 (MQ=255) cagcAGATCGTCGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑cc < 2:1362925/86‑1 (MQ=255) gcAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTAtt < 1:1104656/81‑1 (MQ=255) gcAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTAtt < 1:1104708/81‑1 (MQ=255) gcAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTAtt > 2:1104656/1‑81 (MQ=255) gcAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTAtt > 2:1104708/1‑81 (MQ=255) gcAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCGCTTCTCCAGGGCCGCCAGCAATGATGCCGAGCGCCAGAAAGCCCTGGGCTTTCt > 2:1484125/1‑150 (MQ=255) gcAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGCGCTGGCCGCCAGCAATGATGCCGAGCGCCAGAAAGCCCTGGGCTTTCt < 1:59656/150‑1 (MQ=255) aTCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGCGCTGGCCGCCAGCAATGATGCCGAGCGCCAGAAAGCCCTGGGCTTTCTtgtg < 2:148140/150‑1 (MQ=255) tCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGCGCTGGCCGCCAGCAATGATGCCGAGCGCCAGAAAGCCCTGGGCTTTCTTGTgg < 1:864300/150‑1 (MQ=255) cgacgaTCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTa > 1:1482281/1‑59 (MQ=255) cgacgaTCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTa < 2:1482281/59‑1 (MQ=255) cgacgaTCTGCTGCGGCGTGAACATCGCTTCATAGAAGATGCGGCCCACGAGATGCGTGCGACTCTGGCGTTATTGCGTCATTTAC‑TTTGTTATTCGCTTGCCGCCAGCAATGATGCCGAGCGCCAGAAAGACATGGGTTTTGTTGTggg > 1:432584/1‑150 (MQ=255) | GATCGGCTGGGGGCTGCGGCCACTGCAGAACATGGCCAATGTCATCCGCAGGCGTCATGCAGATTCGCTGGAGCCGCTGCAACTGGTACCGCTTCCCACTGAACTGGAGCCCATGCAGGCGGCCATCAATCGCTTGCTGGCGCAGATCGACGATCTGCTGCGGCGTGAACATCGCTTCATTGCCGATGCTGCCCACGAAATGCGTACGCCTCTGGCCGTATTGCG‑CCTGCACGCGCAGAACGCGCTGGCCGCCAGCAATGATGCCGAGCGCCAGAAAGCCCTGGGCTTTCTTGTGGG > NC_002947/3104061‑3104357 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |