| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,121,637 | C→G | 5.4% | G90A (GGC→GCC) | PP_2738 ← | putative Transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,121,637 | 0 | C | G | 5.4% | 255.5 / 4.6 | 87 | G90A (GGC→GCC) | PP_2738 | putative Transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (38/42); new base G (2/3); total (41/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
CAGCCTGCCTTTGAGCCAGCGGATTGCTGTGCCCATGACGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCGGTGGCGTTGGCGTACAACTGCTCGAAGTAGGCACGCAGGGCCTGCAGCCCCTGT > NC_002947/3121489‑3121786 | cAGCCTGCCTTTGAGCCAGCGGATTGCTGTGCCCATGACGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGgccgcc > 2:1392314/1‑150 (MQ=255)cAGCCTGCCTTTGAGCCAGCGGATTGCTATGCCGATGACGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGgccgcc > 1:347948/1‑150 (MQ=255) cctgcctTTGAGCCAGCGGATTGCTGTGCCCATGACGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGc < 2:128327/150‑1 (MQ=255) tgcctTTGAGCCAGCGGATTGCTGTGCCCATGCCGGGTAGGTGCTCATAAAACAGGGCGCCGGAGTCGAAAGAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCAGGCCGCCGGccc > 2:1056222/1‑149 (MQ=255) gcctTTGAGCCAGCGGATTGCTGTGCCCATGACGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAg > 2:105494/1‑150 (MQ=255) tttGAGCCAGCGGATTGCTGTGCCCATGACGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGgcg > 1:1334874/1‑150 (MQ=255) ttGAGCCAGCGGATTGCTGTGCCCATGACGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGCCTGGCCGGCGGCCAGccga < 2:573869/150‑2 (MQ=255) ccAGCGGATTGCTGTGCCCATGACGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCgg < 1:502632/147‑1 (MQ=255) ccAGCGGATTGCTGTGCCCATGACGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCgg > 2:502632/1‑147 (MQ=255) ccAGCGGATTGCTGTGCCCATGACGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTg < 2:1239164/150‑1 (MQ=255) ccAGCGGATTGCTGTGCCCATGACGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTg < 1:130235/150‑1 (MQ=255) aGCGGATTGCTGTGCCCATGACGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAACTGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGc > 1:1563726/1‑150 (MQ=255) cGGATTGCTGTGCCCATGACGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGTAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCaa < 1:1920629/150‑1 (MQ=255) cGGATTGCTGTGCCCATGACGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCaa > 2:1649772/1‑150 (MQ=255) aTTGCTGTGCCCATGACGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGTGGGTGGCAAAAc > 2:566274/1‑150 (MQ=255) aTTGCCGTGCCCATGACGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAAc < 1:1523992/150‑1 (MQ=255) cTGTGCCCATGACGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCa < 2:250341/150‑1 (MQ=255) gtgCCCATGACGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAgt < 1:321959/150‑1 (MQ=255) ccATGACGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAACTAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTcc < 1:208110/150‑1 (MQ=255) aTGACGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCaa < 1:1112991/150‑1 (MQ=255) aTGACGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCaa > 1:1130837/1‑150 (MQ=255) tGACGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAAc < 2:343211/150‑1 (MQ=255) tGACGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAAc > 1:1122648/1‑150 (MQ=255) cGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCa < 2:938366/150‑1 (MQ=255) gggAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAg < 2:1148822/150‑1 (MQ=255) gggAAGGTGCTCATAAAGCAGGGCCCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAg > 2:1286187/1‑150 (MQ=255) aGGNGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGAGCGGGTGTTAATACTGCAGTGTCCAACGCAGGTAg > 2:1185734/1‑150 (MQ=255) ggTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGTGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGc < 1:566274/150‑1 (MQ=255) ggTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGt > 1:749679/1‑120 (MQ=255) ggTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGt < 2:749679/120‑1 (MQ=255) tGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAg < 1:1712088/147‑1 (MQ=255) tGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAg > 2:1712088/1‑147 (MQ=255) tCATAAAGCAGGGCGCCGGTGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGc > 1:913383/1‑150 (MQ=255) tCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGTCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCa > 1:83991/1‑139 (MQ=255) tCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGTCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCa < 2:83991/139‑1 (MQ=255) tCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGc > 2:717230/1‑150 (MQ=255) tCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGCCTGGCCGGCGGCCAgccga > 2:553400/1‑107 (MQ=255) tCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGCCTGGCCGGCGGCCAGccga < 1:553400/111‑2 (MQ=255) cttAAAGCCGGGCGACGTAGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGATACAGCCTTGCAGCGTGATCGGCTGACCGCCGGCCCGGCGCGGGTGGCAAAACTGCAGTGTCCAACACAGGTAGCCCTGcc > 2:800209/3‑150 (MQ=255) cATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGcc > 2:1386680/1‑150 (MQ=255) cATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGcc > 1:1284431/1‑150 (MQ=255) aTAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCgg < 2:1731986/111‑1 (MQ=255) aTAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCgg > 1:1731986/1‑111 (MQ=255) aaGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCAGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCggg < 1:711954/150‑1 (MQ=255) aGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGc < 2:1279094/150‑1 (MQ=255) ggCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTAc < 1:1432401/150‑1 (MQ=255) gcgcCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTAcc > 2:1456296/1‑150 (MQ=255) cgcCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCt > 2:1108615/1‑150 (MQ=255) gTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAg > 1:1017067/1‑120 (MQ=255) gTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAg < 2:1017067/120‑1 (MQ=255) aaTAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAg < 1:1067860/82‑1 (MQ=255) aaTAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAg > 2:1067860/1‑82 (MQ=255) aTAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTCGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGt < 1:1056222/150‑1 (MQ=255) tCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAg > 1:1130736/1‑150 (MQ=255) ccTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAgg < 1:1610387/150‑1 (MQ=255) cTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGGGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGGCTGCGCGGGTGAAGGc > 2:895351/1‑150 (MQ=255) gtggAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTa > 2:391274/1‑150 (MQ=255) aaTGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGa > 1:81320/1‑150 (MQ=255) aaTGCACACGGTCACGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTCGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGa < 1:1832046/150‑1 (MQ=255) aTGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCAGAATGCAGAACTGCAGTGTCCAACGAAGGTAGCCCGGCCCGGGCGTGACCTCGTCGGCGCTGGTGAAGGCGTAGCGGat > 1:1868810/1‑150 (MQ=255) acacGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGGTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCg > 2:979917/1‑150 (MQ=255) acacGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCg > 2:1125542/1‑150 (MQ=255) acacGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCg < 1:1254726/150‑1 (MQ=255) acacGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCg > 2:1631803/1‑150 (MQ=255) cacGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGTCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCgg > 2:267070/1‑150 (MQ=255) acGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCGGt < 2:418445/150‑1 (MQ=255) cGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCGGtg < 2:81320/150‑1 (MQ=255) ccAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCGGtggcgttagc < 2:1122648/150‑1 (MQ=255) aTGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCGGTGGCGTTGGCGTa < 2:1130736/150‑1 (MQ=255) aTGCAGGCAGCTGCAGCCTTGCAGCGTGATCCGCTGGCGGGCGGCTTGGCGCGTGTGGCAAAGCGGCAGTGTCCAACGCAGGTAGCCCTGACCGGGCTTTACCTCGTCGGTGCTGGTGAAGGCGTAGCGGATATCGGTGGCGTTGCCGTa < 2:530469/150‑1 (MQ=255) gcagCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCGGt > 2:1185182/1‑132 (MQ=255) gcagCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCGGt < 1:1185182/132‑1 (MQ=255) cagCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCGGTGGCGTTGGCGTACAACTGc < 1:105494/150‑1 (MQ=255) agCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCGGTGGCGTTGGCGTACAACTGCt < 1:1631803/150‑1 (MQ=255) agCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCGGTGGCGTTGGCGTACAACTGCt > 1:1697058/1‑150 (MQ=255) gCTGCAGCCTTGCAGCGTGATCGGCTGGACGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGACATGCCCGGGCTTTAACTCGTCGGCGCGGGTGAGGTCTTACCGTATATCTTTTTCGGGGGCTTACAACTGCTc < 2:19769/150‑1 (MQ=255) gCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCGGTGGCGTTGGCGTACAACTGCTCGaa < 1:1456296/150‑1 (MQ=255) gCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCGGTGGCGTTGGCGTACAACTGCTCGAAGTa < 2:1563726/150‑1 (MQ=255) ccctGCAGCGTGAGCGGCGGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCGGTGGCGTTGGCGTACAACTGCTCGAAGTAg < 2:1084860/147‑1 (MQ=255) tGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCgg < 2:1001774/76‑1 (MQ=255) tGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCgg > 1:1001774/1‑76 (MQ=255) tGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCGGTGGCGTTGGCGTACAACTGCTCGAAGTAGGCa < 1:1649772/150‑1 (MQ=255) cAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCGGTGGCGTTGGCGTACAACTGCTCGAAGTAGGCACg > 2:1400727/1‑150 (MQ=255) gATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCGGTGGCGTTGGCGTACAACTGCTCGAAGTAGGCACGCAGGGc > 1:110573/1‑150 (MQ=255) gcgccTGGCCGGCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCGGTGGCGTTGGCGTACAACTGCTCGAAGTAGGCACGCAGGGCCt > 1:298599/5‑150 (MQ=255) gCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCGGTGGCGTTGGCGTACAACTGCTCGAAGTAGGCACGCAGGGCCTGCa < 2:1697058/150‑1 (MQ=255) gCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGGCGGCGCTGGTGAAGGCGTAGCGGATATCGGTGGCGTTGGCGTACAACTGCTCGAAGTAGGCACGCAGGGCCTGCa < 1:1286187/150‑1 (MQ=255) gCTGGCCGCCGGCCAGGCGCGGGTGGCAAAAATGAAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACGTCGTCGGCGCTGGTGAAGGCGTAGCGGATAGGGGGGGGGCTGACGTAGAACAACAAGAAGGAGACACGCAGGGCCTGCa > 2:475945/1‑150 (MQ=255) gggCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCGGTGGCGTTGGCGTACAACTGCTCGAAGTAGGCACGCAGGGCCTGCAgt < 1:1185734/149‑2 (MQ=255) cgccgGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCGGTGGCGTTGGCGTACAACTGCTCGAAGTAGGCACGCAGGGCCTGCAGCCCCt > 1:507782/1‑150 (MQ=255) ccgGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCGGCACGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCGGTGGCGTTGGCGTACAACTGCTCGAAGTAGGCACGCAGGGCCTGCAGCCCCTGt < 2:347948/150‑1 (MQ=255) | CAGCCTGCCTTTGAGCCAGCGGATTGCTGTGCCCATGACGGGAAGGTGCTCATAAAGCAGGGCGCCGGCGTCGAAATAGTCCTGGTGGAAATGCACACGGTCGCGCCAATGCAGGCAGCTGCAGCCTTGCAGCGTGATCGGCTGGCCGCCGGCCAGGCGCGGGTGGCAAAACTGCAGTGTCCAACGCAGGTAGCCCTGCCCGGGCTTTACCTCGTCGGCGCTGGTGAAGGCGTAGCGGATATCGGTGGCGTTGGCGTACAACTGCTCGAAGTAGGCACGCAGGGCCTGCAGCCCCTGT > NC_002947/3121489‑3121786 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |