| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,217,808 | G→T | 5.6% | E185D (GAG→GAT) | oprJ → | outer membrane protein OprJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,217,808 | 0 | G | T | 5.6% | 283.2 / 2.1 | 90 | E185D (GAG→GAT) | oprJ | outer membrane protein OprJ |
| Reads supporting (aligned to +/- strand): ref base G (38/46); new base T (3/3); total (41/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
GAATACGAAGTGGACCTGTTCGGCCGCGTCAAAAGCCTGAGCGATGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGGCGCTGGGGCTGGTCGAGCAGTCCCGTGCCGAGCTCGAA > NC_002947/3217659‑3217955 | gAATACGAAGTGGACCTGTTCGGCCGCGTCAAAAGCCTGAGCGATGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAg > 2:554695/1‑150 (MQ=255) cGAAGTGGACCTGTTCGGCCGCGTCAAAAGCCTGAGCGATGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAgcggcg > 1:202047/1‑150 (MQ=255) tGGACCTGTTCGGCCGCGTCAAAAGCCTGAGCGATGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAgg > 2:1421311/1‑150 (MQ=255) ggACCTGTTCGGCCGCGTCAAAAGCCTGAGCGATGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGgc < 2:1759065/150‑1 (MQ=255) aCCTGTTCGGCCGCGTCAAAAGCCTGAGCGATGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGCCGGCGCCGAGCGGCGCCAGgcgc > 1:1653859/1‑150 (MQ=255) cTGTTCGGCCGCGTCAAAAGCCTGAGCGATGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTg > 2:296982/1‑150 (MQ=255) ggCCGCGTCAAAAGCCTGAGCGATGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGt < 1:747177/150‑1 (MQ=255) ccGCGTCAAAAGCCTGAGCGATGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCa < 1:1614191/150‑1 (MQ=255) gcgTCAAAAGCCTGAGCGATGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGa > 2:226473/1‑150 (MQ=255) cgTCAAAAGCCTGAGCGATGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGAc < 1:554695/150‑1 (MQ=255) gTCAAAAGCCTGAGCGATGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTCATCGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGAcc > 1:1534198/1‑150 (MQ=255) cAANAGCCTGAGCGATGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCt > 2:1187592/1‑150 (MQ=255) cAAAAGCCTGAGCGATGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCt > 2:380915/1‑150 (MQ=255) cAAAAGCCTGAGCGATGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCt < 2:236299/150‑1 (MQ=255) aaaaGCCTGAGCGATGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTg > 2:1271959/1‑150 (MQ=255) aaaaGCCTGAGCGATGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTg > 1:1461518/1‑150 (MQ=255) ccTGAGCGATGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAg > 1:384692/1‑150 (MQ=255) cTGAGCGATGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGc < 1:820185/150‑1 (MQ=255) tGAGCGATGCGGCCCTGGAGCAGTACCTGGACAACGAGCAATTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGcc < 2:1399958/150‑1 (MQ=255) gAGCGATGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCGAGGCCTCCCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCcg > 1:699059/1‑150 (MQ=255) cGATGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGa < 2:244045/150‑1 (MQ=255) cGATGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGa < 1:406490/150‑1 (MQ=255) gATGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAg < 1:1014208/150‑1 (MQ=255) tGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGa > 2:1352075/1‑150 (MQ=255) tGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGa > 1:1303470/1‑150 (MQ=255) tGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGa > 2:806717/1‑150 (MQ=255) cccTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTccc < 1:806717/150‑1 (MQ=255) ccTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACAGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCt < 2:985373/150‑1 (MQ=255) cTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTg > 2:373131/1‑150 (MQ=255) cTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTg > 1:120949/1‑150 (MQ=255) cTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTg < 1:373131/150‑1 (MQ=255) ggAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGc < 1:1135243/150‑1 (MQ=255) ggAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGc < 1:1849637/150‑1 (MQ=255) cACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAgcg > 2:1576117/1‑150 (MQ=255) cACCGAGGAAGTCGGGCGTGCCGCACACATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAgcg > 1:1696955/1‑150 (MQ=255) aCCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAgcgg > 1:284228/1‑150 (MQ=255) aCCGAGGAAGTCGGGCGTGCCGCACGCATCGAATCGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGATCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAgcgg > 1:1590621/1‑150 (MQ=255) cGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAgcggcg > 2:828442/1‑150 (MQ=255) cGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAgcggcg > 2:357137/1‑150 (MQ=255) gAGGAAGTCGGGCGTGCCGCACGCATCGCCCGGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTAACCGCCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGgcgc < 1:595336/150‑1 (MQ=255) gCGTGACGCATGCATCTCCCTGATCCCCGAGGTGCGCCAGGCCTACCTGGCCTTGGACGCCGCCGAGCGGCGCCATATGATGACCGGTCTGACCGTTGTCAGCCGCGAGGATTCCCTGGCGTTGTTCGGGCAGCGGCGCGCTGCCGGcac < 2:583224/150‑1 (MQ=255) cGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGcacg < 1:781627/150‑1 (MQ=255) gTGCCGCACGCAACGCCCTGATCGCCGAGGCGCGAACGGCTTGCCGCGCCGTGGACGGAACCGAGCGGCGCCAGCCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGAGTTGGTCGGCCAGCGGCGCGCCGCCGGcacgg < 2:912760/150‑1 (MQ=255) cgcacgcaTCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGc < 2:1853032/97‑1 (MQ=255) cgcacgcaTCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGc > 1:1853032/1‑97 (MQ=255) aTCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTg > 1:1735922/1‑150 (MQ=255) cGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGTCGCGCCGCCGGCACGGCCACGGCGCTGGa < 1:815864/150‑1 (MQ=255) gCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGac < 2:1303470/150‑1 (MQ=255) ccTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGcacg > 1:1412157/1‑133 (MQ=255) ccTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGcacg < 2:1412157/133‑1 (MQ=255) ccTGATCGCCGAGGGGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGacca < 2:692144/150‑1 (MQ=255) cTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGaccac < 1:1528125/150‑1 (MQ=255) cTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGaccac < 1:1352075/150‑1 (MQ=255) tGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGaccacc < 2:384692/150‑1 (MQ=255) tGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGaccacc > 2:94538/1‑150 (MQ=255) aTCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGTCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCaa < 1:1187592/150‑1 (MQ=255) aTCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCaa < 1:380915/150‑1 (MQ=255) cGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAaga < 1:296982/150‑1 (MQ=255) gAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCCGACTCAAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGgcg > 1:1670087/1‑150 (MQ=255) aGGTGAGCCAGGCCTACCTGGCCTTGGACGAGCCTGGTTCGCTCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGgcgc < 2:1590621/150‑1 (MQ=255) tGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGGCGCTgg < 2:1217313/150‑1 (MQ=255) ggAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGTCCCTGGCCAGCCGCGGGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGGCGCTgg < 1:1670490/149‑1 (MQ=255) ccAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGGCGCTGGGGCt > 1:603464/1‑150 (MQ=255) cAGGCCTACCTGGCCTTGGACGGGGCCGAGCGGCGCCGGGCGCTGACCCGTCCGGCGCTGGCGAGCCGCGAGGGTTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGGCGCTGGGGCTg < 2:1653859/150‑1 (MQ=255) cAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGGCGCTGGGGCTg < 1:226473/150‑1 (MQ=255) aGGCCTACCTGGCCTTGGACGGCGCCGGGCCGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCTTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGGCGCTGGGGCTgg < 2:1534198/150‑1 (MQ=255) aGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGGCGCTGGGGCTgg < 1:482284/150‑1 (MQ=255) aGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGGCGCTGGGGCTgg < 1:1576117/150‑1 (MQ=255) ggCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCAGCCCGCACTGCCACGGCGCTGGACCACCAAGAGGCGCTGGGGCTGGt < 2:1809620/150‑1 (MQ=255) gCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTTGCCAGCCGCGAGGATTCCCTg < 2:1656496/78‑1 (MQ=255) gCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTg > 1:1656496/1‑78 (MQ=255) gCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGGCGCTGGGGCTGGTc > 2:164851/1‑150 (MQ=255) gCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGGCGCTGGGGCTGGTc > 1:972861/1‑150 (MQ=255) cTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGGCGCTGGGGCTGGTCGa > 1:270133/1‑150 (MQ=255) cTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGGCGCTGGGGCTGGTCGa < 2:603464/150‑1 (MQ=255) tACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGac < 2:213609/123‑1 (MQ=255) tACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGac > 1:213609/1‑123 (MQ=255) aCCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGGCGCTGGGGCTGGTCGAGc < 2:202047/150‑1 (MQ=255) ccTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGGCGCTGGGGCTGGTCGAGcc > 2:550848/1‑149 (MQ=255) ccTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGGCGCTGGGGCTGGTCGAGCa < 1:164851/150‑1 (MQ=255) ccTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGGCGCTGGGGCTGGTCGAGCa < 2:972861/150‑1 (MQ=255) cTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGGCGCTGGGGCTGGTCGAGCAGTCCCg > 1:1142437/1‑150 (MQ=255) ttGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGGCGCTGGGGCTGGTCGAGCAGTCCCGt > 1:1208103/1‑150 (MQ=255) ttGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGGCGCTGGGGCTGGTCGAGCAGTCCCGt > 1:1266123/1‑150 (MQ=255) ctggCGCCGCTCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGcacggccac < 2:674083/98‑1 (MQ=255) ctggCGCCGCTCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGcacggccac < 2:675494/98‑1 (MQ=255) ctggCGCCGCTCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGcacggccac > 1:675494/3‑100 (MQ=255) ctggCGCCGCTCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGcacggccac > 1:674083/3‑100 (MQ=255) gcCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGGCGCTGGGGCTGGTCGAGCAGTCCCGTGCCGAGCTc > 2:1279932/1‑150 (MQ=255) ccGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGGCGCTGGGGCTGGTCGAGCAGTCCCGTGCCGAGCTCg > 1:245485/1‑150 (MQ=255) gAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGGCGCTGGGGCTGGTCGAGCAGTCCCGTGCCGAGCTCGaa < 2:1142437/150‑1 (MQ=255) gAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCACGACGACCAAGAGGCGCTGGGGCTGGTCGAGCAGTCCCGTGCCGAGCTCGaa < 2:1706691/150‑1 (MQ=255) | GAATACGAAGTGGACCTGTTCGGCCGCGTCAAAAGCCTGAGCGATGCGGCCCTGGAGCAGTACCTGGCCACCGAGGAAGTCGGGCGTGCCGCACGCATCGCCCTGATCGCCGAGGTGAGCCAGGCCTACCTGGCCTTGGACGGCGCCGAGCGGCGCCAGGCGCTGACCCGTCAGACCCTGGCCAGCCGCGAGGATTCCCTGGCGTTGGTCGGCCAGCGGCGCGCCGCCGGCACGGCCACGGCGCTGGACCACCAAGAGGCGCTGGGGCTGGTCGAGCAGTCCCGTGCCGAGCTCGAA > NC_002947/3217659‑3217955 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |