| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,300,206 | T→A | 6.2% | intergenic (+61/+21) | pvdQ → / ← lpxH | acyl‑homoserine lactone acylase PvdQ/UDP‑2,3‑diacylglucosamine hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,300,206 | 0 | T | A | 6.2% | 270.8 / 6.9 | 94 | intergenic (+61/+21) | pvdQ/lpxH | acyl‑homoserine lactone acylase PvdQ/UDP‑2,3‑diacylglucosamine hydrolase |
| Reads supporting (aligned to +/- strand): ref base T (45/41); new base A (2/4); total (48/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.30e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.53e-01 | |||||||||||
TTACCGAGGCGCAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTTGTGAATCG > NC_002947/3300057‑3300354 | ttACCGAGGCGCAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCtt < 1:141119/150‑1 (MQ=255) gAGGCGCAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCcg > 1:1574996/1‑150 (MQ=255) gcgcAGATCAAGGCAGATCCGGAGTACCGGGAAGGGGTGATGAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTGAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGa < 2:717189/150‑1 (MQ=255) gcAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAgg > 2:675903/1‑150 (MQ=255) cAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCTCGCGGGCAAGCCcgcaggc < 2:341804/150‑5 (MQ=39) cAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑c < 1:658298/150‑1 (MQ=255) gATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑ccc > 2:596044/1‑150 (MQ=255) aTCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAgg < 1:1435204/146‑1 (MQ=255) aTCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAgg > 2:1435204/1‑146 (MQ=255) aaGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACA‑GGGCCTCGCGGGCAAGCCCGC‑AGG‑cccctgta < 1:456348/150‑6 (MQ=38) aGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAACAGGACAAGGGAGCGGTAGACAACCAGCCCTAAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTaa > 1:1181092/1‑150 (MQ=39) ggCAGATCCTGAGTACCGGGAAGTGGTGAGCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAAt < 1:295518/150‑1 (MQ=255) ccAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGATAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCAGCGAGG‑CCCTGTAATg > 2:1742214/2‑150 (MQ=255) gATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCa < 1:791056/150‑1 (MQ=255) gATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCa > 1:744306/1‑150 (MQ=255) gATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCa < 2:608523/150‑1 (MQ=255) tGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGaaa > 2:249960/1‑150 (MQ=255) gAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTACTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGaaaa > 2:1040590/1‑150 (MQ=255) tACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACA‑GGGCCTCGCGGGCAAGCCCGC‑AGG‑cccctgtag > 2:1741688/1‑130 (MQ=37) tACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACA‑GGGCCTCGCGGGCAAGCCCGC‑AGG‑cccctgtag < 1:1741688/136‑7 (MQ=37) gggAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGTTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAAc < 2:350291/150‑1 (MQ=255) aaGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGgc < 2:1240586/150‑1 (MQ=255) gtggtgATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGACCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGgcgc > 2:1526651/1‑150 (MQ=255) tggtgATCAGTGAGCGGGACAAGGGGGCGGTAGCCGTTCAGCCCTGAGGCGTCAGCCTTCGCCGGCCCATTCGACGGACAATACTCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGcc > 1:1096635/1‑150 (MQ=255) aTCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAg < 2:426556/127‑1 (MQ=255) aTCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAg > 1:426556/1‑127 (MQ=255) aTCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTg > 2:1347499/1‑150 (MQ=255) tCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGa > 1:1150609/1‑150 (MQ=255) aGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGaaa > 1:1638513/1‑150 (MQ=255) aGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGaaa < 1:298073/150‑1 (MQ=255) aGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGaaa < 1:1907371/150‑1 (MQ=255) tGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGc < 2:1638513/150‑1 (MQ=255) tGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTCGCCCGCGCGG‑CCTGGTAGTGTCAGGAGGACTCGAACGTCGCCAACCGAACGc > 2:310492/1‑150 (MQ=38) aGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑c > 2:1924463/1‑107 (MQ=255) aGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑c < 1:1924463/107‑1 (MQ=255) gCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCTGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCt < 1:958441/150‑1 (MQ=255) gCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCCACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCt < 2:1313658/150‑1 (MQ=255) gggACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTACTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGt < 1:1040590/150‑1 (MQ=255) gggACAAGGGAGCCGTAGTCCGCCATCCGTGATGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCGGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGt < 1:418150/150‑1 (MQ=255) ggggCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAAc > 1:748696/1‑150 (MQ=255) ggggCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCAAACTGAAAGCCCTGTTCGTCAAc > 1:327205/1‑150 (MQ=255) gggCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAAcc > 1:835109/1‑150 (MQ=255) ggCTGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCt < 2:1181092/150‑1 (MQ=255) gCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTg > 2:1844140/1‑150 (MQ=255) cGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGc < 1:1836853/150‑1 (MQ=255) gTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGgcg < 2:718923/119‑1 (MQ=255) gTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGGAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGgcg > 1:718923/1‑119 (MQ=255) gTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGc < 1:1807935/150‑1 (MQ=255) agccagccCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCa > 1:768464/1‑150 (MQ=255) gccagccCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCaa > 1:910827/1‑150 (MQ=255) ccagccCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGTTTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAAc < 1:576307/150‑1 (MQ=255) ccagccCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGcc > 1:709447/1‑74 (MQ=255) ccagccCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGcc < 2:709447/74‑1 (MQ=255) ccagccCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGCACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAAc < 1:713680/150‑1 (MQ=255) ccagccCTGAGGCGTCAGCCTGCGACGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCCAc > 2:1283028/1‑150 (MQ=255) ccTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCgcgg < 1:759842/150‑1 (MQ=255) cTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCAGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCgcggc < 1:1742214/150‑1 (MQ=255) tGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCgcggcg > 2:320394/1‑150 (MQ=255) tGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCgcggcg < 1:1387605/150‑1 (MQ=255) gCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTcc < 2:1743371/150‑1 (MQ=255) gTCAGCCTGCGCCGGCCCATTCGCGGTTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGGCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCa > 2:1175466/1‑150 (MQ=255) gTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCa > 2:199065/1‑150 (MQ=255) ccGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCa < 1:1169084/150‑1 (MQ=255) cGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCAc < 2:1574996/150‑1 (MQ=255) ccATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGTAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCCGCACGATa > 2:276172/1‑150 (MQ=255) cATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGCACGGCCCCAACTGAAAGCCCTTTTCGACCACCCGCAACGCCCCACCGCCGCGGCCCCAGGCGCCCCACACGacac > 2:1565803/1‑150 (MQ=255) cATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATAc < 2:1150609/150‑1 (MQ=255) gTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCg > 2:1168799/1‑150 (MQ=255) gTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCg > 1:297729/1‑150 (MQ=255) aaaCCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGaa > 2:1714641/1‑65 (MQ=255) aaaCCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGaa < 1:1714641/65‑1 (MQ=255) aaCCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCt > 1:121815/1‑150 (MQ=255) ccccGCTCCTACAGGGGACT‑AAGGGGTATCCCGCGTGT‑TCCTTTAATGTCAGGACAAATCACACAATTTTTCCGGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTg < 1:35407/149‑1 (MQ=255) aCCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTg < 1:249960/150‑1 (MQ=255) gCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCa < 2:704817/116‑1 (MQ=255) gCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCa > 1:704817/1‑116 (MQ=255) ccTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATcc > 2:221434/1‑149 (MQ=255) attacagggCCTCGCGGGCAAGCCCGC‑AGGCCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCg > 1:672721/7‑150 (MQ=38) aGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCAt > 1:1740240/1‑150 (MQ=255) gCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGc > 2:1252393/1‑150 (MQ=255) ccT‑GCGGGCGTACCCGCGATG‑CCCTGGCATGACAGGAGAACTCGAACGGCGCCAACTGAAAGCCCTGTCCGTCAACGTGCAAGGCCGAACACCGGAGCCCACAGGCGCCAAGCACGCCACGCCGGGGCGGCTGGGCGTCGACAATCAGcg > 2:309668/1‑149 (MQ=255) cT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCtt < 1:163632/150‑1 (MQ=255) t‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCt < 1:1879916/130‑1 (MQ=255) t‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCt > 2:1879916/1‑130 (MQ=255) t‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTtg > 1:557609/1‑150 (MQ=255) t‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTtg > 2:569397/1‑150 (MQ=255) t‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTtg < 2:812238/150‑1 (MQ=255) t‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTtg < 1:1168799/150‑1 (MQ=255) t‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTtg > 1:324778/1‑150 (MQ=255) gCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTtgt < 1:1844140/150‑1 (MQ=255) gCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTtgt < 2:121815/150‑1 (MQ=255) cGGGCTTGCCCGGCAGG‑CCCGGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTtgtg > 2:1514045/1‑150 (MQ=255) ggCTGGCCCGCGAGG‑CTCTGTAATGTCAGGAAAACCCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTTGTGaa < 2:829694/150‑1 (MQ=255) gCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGa > 2:548290/1‑134 (MQ=255) gCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGa < 1:548290/134‑1 (MQ=255) ttGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTc > 2:692823/1‑97 (MQ=255) ttGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTc < 1:692823/97‑1 (MQ=255) ttGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCCGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTTGTGAATCg < 1:596044/150‑1 (MQ=255) ttGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGATAGTCAACCTGAAAATATTTACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTTGTGAATCg > 1:231780/1‑150 (MQ=255) | TTACCGAGGCGCAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGG‑CCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTTGTGAATCG > NC_002947/3300057‑3300354 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |