Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,661,419 C→T 6.5% A107T (GCT→ACT)  PP_3225 ← D‑isomer specific 2‑hydroxyacid dehydrogenase family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,661,4190CT 6.5% 260.7 / 5.7 92A107T (GCT→ACT) PP_3225D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
Reads supporting (aligned to +/- strand):  ref base C (33/53);  new base T (3/3);  total (36/56)
Fisher's exact test for biased strand distribution p-value = 6.75e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.84e-01

CACGGCCTTGCGCGCCAGGCTCTGGCCGATACTGCCGAAGCCGAGGATGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCAGGGCCACCCGGGTGGCGGGGT  >  NC_002947/3661270‑3661566
                                                                                                                                                       |                                                                                                                                                   
cACGGCCTTGCGCGCCAGGCTCTGGCCGATACTGCCGAAGCCGAGGATGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGc                                                                                                                                                     >  1:683039/1‑150 (MQ=255)
 aCGGCCTTGCGCGCCAGGCTCTGGCCGATACTGCCGAAGCCGAGGATGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGcc                                                                                                                                                    >  1:1157375/1‑150 (MQ=255)
 aCGGCCTTGCGCGCCAGGCTCTGGCCGATACTGCCGAAGCCGAGGATGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGGCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGcc                                                                                                                                                    >  2:64596/1‑150 (MQ=255)
 aCGGCCTTGCGCGCCAGGCTCTGGCCGATACTGCCGAAGCCGAGGATGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGACAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGGGTGGCGGCGGCGAACACCAAAGcc                                                                                                                                                    >  1:645750/1‑150 (MQ=255)
    gCCTTGCGCGCCAGGCTCTGGCCGATACTGCCGAAGCCGAGGATGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAgg                                                                                                                                                 <  1:868272/150‑1 (MQ=255)
     ccTTGCGCGCCAGGCTCTGGCCGATACTGCCGAAGCCGAGGATGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAggg                                                                                                                                                >  1:1736/1‑150 (MQ=255)
              gcAGGCTCGGGCCGATACTGCGGAAGCCGAGGATGCCCAGGGTGCGAGCACGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCgg                                                                                                                                       <  2:668718/149‑1 (MQ=255)
               cAGGCTCTGGCCGATACTGCCGAAGCCGAGGATGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGc                                                                                                                                      >  2:1695329/1‑150 (MQ=255)
                    tctGGCCGATACTGCCGAAGCCGAGGATGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGGCGGAGTTGTCGA‑TCATACCGCCGCGCAGTCGCGGGGCGGCGGCGAAAACCAAAGCCAGGGCAAACTCGGCCACtt                                                                                                                                 >  1:697225/1‑150 (MQ=255)
                       ggCCGATACTGCCGAAGCCGAGGATGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGtt                                                                                                                              >  1:952876/1‑150 (MQ=255)
                          cGATACTGCCGAAGCCGAGGATGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCgg                                                                                                                           >  2:1321409/1‑150 (MQ=255)
                           gATACTGCCGAAGCCGAGGATGCCCAGGGTGCGACCACGCAACGGGGCAAGCCGAGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGc                                                                                                                          <  2:1484626/150‑1 (MQ=255)
                                tGCCGAAGCCGAGGATGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTgg                                                                                                                     <  2:731490/150‑1 (MQ=255)
                                        ccGAGGATGCCCAGGGTGCGACCAAGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTg                                                                                                             >  1:256350/1‑150 (MQ=255)
                                          gAGGATGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGcc                                                                                                           <  1:689381/150‑1 (MQ=255)
                                              aTGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTg                                                                                                       <  1:1321409/150‑1 (MQ=255)
                                              aTGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTg                                                                                                       <  2:2011/150‑1 (MQ=255)
                                              aTGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTg                                                                                                       <  2:1908392/150‑1 (MQ=255)
                                              aTGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTg                                                                                                       <  2:1299619/150‑1 (MQ=255)
                                                   ccgggTGCGACCACGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGCACACCACAACCAGCGCAAACTCGGCCACTTGTTCGGCGTTCGCGCCTTTGCCGCTGGCTAc                                                                                                  >  2:915208/3‑150 (MQ=255)
                                                       gTGCGACCACGCAACGGGGCCAGCGGGGTCAGGACACCTG‑CTGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTc                                                                                              <  2:1400580/150‑1 (MQ=255)
                                                       gTGCGACCACGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTc                                                                                              <  1:626057/150‑1 (MQ=255)
                                                           gACCCCGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTc                                                                                              <  2:1045762/146‑1 (MQ=255)
                                                           gACCACGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTc                                                                                              >  1:1045762/1‑146 (MQ=255)
                                                              cACGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCt                                                                                       <  2:1157375/150‑1 (MQ=255)
                                                              cACGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCt                                                                                       <  2:1736/150‑1 (MQ=255)
                                                              cACGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCt                                                                                       <  1:1035506/150‑1 (MQ=255)
                                                              cACGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCt                                                                                       >  1:606119/1‑150 (MQ=255)
                                                               aCGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTg                                                                                      <  2:1886679/150‑1 (MQ=255)
                                                               aCGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTCACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTg                                                                                      >  1:832415/1‑150 (MQ=255)
                                                                   aaCGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAg                                                                                                                                                  <  1:1431812/86‑1 (MQ=255)
                                                                   aaCGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAg                                                                                                                                                  >  2:1431812/1‑86 (MQ=255)
                                                                   aaCGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAac                                                                                  >  2:45067/1‑150 (MQ=255)
                                                                           cAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCCAAGCCAGGGCAAACTCGGCCACGTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCACTGGAACACCCAGTc                                                                          >  2:709151/1‑150 (MQ=255)
                                                                             gCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCgg                                                                        <  1:1016351/150‑1 (MQ=255)
                                                                             gCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCgg                                                                        <  2:1705499/150‑1 (MQ=255)
                                                                              cGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCggg                                                                       <  2:1118319/150‑1 (MQ=255)
                                                                               ggggTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCgggg                                                                      <  1:584485/150‑1 (MQ=255)
                                                                                gggTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTATTGTCGCCCCCTGGAACACCCAGTCGGGGt                                                                     <  1:1698042/150‑1 (MQ=255)
                                                                                 ggTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTCGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTa                                                                    <  2:1263479/150‑1 (MQ=255)
                                                                                  gTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGTCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAg                                                                   >  1:546128/1‑150 (MQ=255)
                                                                                  gTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGTCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAg                                                                   >  1:546397/1‑150 (MQ=255)
                                                                                  gTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGTCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAg                                                                   >  1:546249/1‑150 (MQ=255)
                                                                                   tCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGACAACCCCGTCGGGGTAGa                                                                  >  1:1633497/1‑150 (MQ=255)
                                                                                   tCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGa                                                                  >  1:198657/1‑150 (MQ=255)
                                                                                   tCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGa                                                                  >  1:1213315/1‑150 (MQ=255)
                                                                                   tCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGa                                                                  >  1:1203781/1‑150 (MQ=255)
                                                                                    cAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGaa                                                                 <  1:1494151/150‑1 (MQ=255)
                                                                                    cAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGaa                                                                 <  2:623528/150‑1 (MQ=255)
                                                                                     aGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GTCTTGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGGCGGGGTAGAAg                                                                >  1:51000/1‑150 (MQ=255)
                                                                                     aGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAg                                                                <  1:954065/150‑1 (MQ=255)
                                                                                      gg‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTTGTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGt                                                               <  1:957932/150‑1 (MQ=255)
                                                                                       g‑cgcCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGGGGCTCTGTGTCTTTGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTc                                                              >  2:833667/1‑150 (MQ=255)
                                                                                          gcCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGt                                                               >  1:1633507/1‑147 (MQ=255)
                                                                                          gcCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGt                                                               <  2:1633507/147‑1 (MQ=255)
                                                                                           ccAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGAt                                                           <  1:1567823/150‑1 (MQ=255)
                                                                                            cAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCTAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATg                                                          <  1:720076/150‑1 (MQ=255)
                                                                                             aGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGc                                                         <  1:1695329/150‑1 (MQ=255)
                                                                                               tCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGTCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGccc                                                       <  2:546249/150‑1 (MQ=255)
                                                                                               tCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGTCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGccc                                                       <  2:546128/150‑1 (MQ=255)
                                                                                               tCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGccc                                                       <  2:631879/150‑1 (MQ=255)
                                                                                               tCGGCGGCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGTCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGccc                                                       <  2:546397/150‑1 (MQ=255)
                                                                                                 ggCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGa                                                     >  1:624686/1‑150 (MQ=255)
                                                                                                  gCGTCCTTGACCCAGA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGaa                                                    <  2:679881/150‑1 (MQ=255)
                                                                                                    gTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGa                                                  <  1:824171/150‑1 (MQ=255)
                                                                                                       cTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGaa                                                    >  1:1115968/1‑145 (MQ=255)
                                                                                                       cTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCACCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGaa                                                    <  2:1115968/145‑1 (MQ=255)
                                                                                                        ttGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCAAGTGGCACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACAcc                                              >  1:1452809/1‑150 (MQ=255)
                                                                                                          gACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAg                                            >  2:56268/1‑150 (MQ=255)
                                                                                                             ccATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTg                                         >  1:1601008/1‑150 (MQ=255)
                                                                                                                 a‑GACCGGGCAGTTGCTTGGCGGCGGCAAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCTATTCTCGAAGACACCAGTTGCAcc                                     <  2:898836/150‑1 (MQ=255)
                                                                                                                    aCCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCa                                   >  2:1620791/1‑150 (MQ=255)
                                                                                                                     ccGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCAc                                  <  2:1601008/150‑1 (MQ=255)
                                                                                                                       gggCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACtt                                <  2:256394/150‑1 (MQ=255)
                                                                                                                       gggCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACtt                                >  2:234839/1‑150 (MQ=255)
                                                                                                                          cAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTNCAg                             <  2:1203781/150‑1 (MQ=255)
                                                                                                                             ttGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGcc                          <  1:64596/150‑1 (MQ=255)
                                                                                                                                 ttGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCAg                      >  2:1582046/1‑150 (MQ=255)
                                                                                                                                 ttGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCAg                      >  2:1582019/1‑150 (MQ=255)
                                                                                                                                 ttGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCAg                      >  2:220674/1‑150 (MQ=255)
                                                                                                                                 ttGGCCGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCAg                      <  2:645750/150‑1 (MQ=255)
                                                                                                                                  tGGCGGCGGCGAACACCAAAGCCAGTGCAAACTTCGCCACTTGTTCGGCCTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCAgg                     <  2:683039/150‑1 (MQ=255)
                                                                                                                                  tGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCTGCCACTTGATCGGCTTCATCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCAgg                     <  2:989558/150‑1 (MQ=255)
                                                                                                                                  tGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCAgg                     <  2:624686/150‑1 (MQ=255)
                                                                                                                                  tGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCAgg                     <  2:315106/150‑1 (MQ=255)
                                                                                                                                           cgAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCAGGGCCACCCgg            <  1:1620791/150‑1 (MQ=255)
                                                                                                                                            gAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCAGGGCCACCCggg           >  2:786773/1‑150 (MQ=255)
                                                                                                                                              acacCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTACACCCACTTCAg                             <  2:1720136/130‑1 (MQ=255)
                                                                                                                                              acacCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTACACCCACTTCAg                             >  1:1720136/1‑130 (MQ=255)
                                                                                                                                                acCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCAGGGCCACCCGGGTGGc       >  1:1430789/1‑150 (MQ=255)
                                                                                                                                                    aaGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCAGGGCCACCCGGGTGGCgggg   <  1:234839/150‑1 (MQ=255)
                                                                                                                                                     cgCCAGGGCAAACGCGGCCGCTTGTTCGGCGTTGGCGTCTTTGCCGCTGGTGACCGTCGCCCACTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCGGGGCCACCCGGGTGGccctgg  <  2:566528/149‑6 (MQ=255)
                                                                                                                                                     aGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCAGGGCCACCCGGGTGGccctgg  <  2:606119/150‑6 (MQ=255)
                                                                                                                                                     aGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCAGGGCCACCCGGGTGGCGGGGt  <  1:45067/150‑1 (MQ=255)
                                                                                                                                                     aGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCAGGGCCACCCGGGTGGCGGGGt  <  2:697225/150‑1 (MQ=255)
                                                                                                                                                     aGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCAGGGCCACCCGGGTGGCGGGGt  <  2:1726958/150‑1 (MQ=255)
                                                                                                                                                       |                                                                                                                                                   
CACGGCCTTGCGCGCCAGGCTCTGGCCGATACTGCCGAAGCCGAGGATGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGTCAGG‑CGCCAGTCGGCGTCCTTGACCCATA‑GACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCAGGGCCACCCGGGTGGCGGGGT  >  NC_002947/3661270‑3661566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑