| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,762,990 | A→T | 5.7% | I64F (ATC→TTC) | PP_3326 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,762,990 | 0 | A | T | 5.7% | 246.2 / 4.2 | 81 | I64F (ATC→TTC) | PP_3326 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (40/36); new base T (2/3); total (42/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.68e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
TGGTCAGCGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCATGTCAAGGAT > NC_002947/3762841‑3763139 | tGGTCAGCGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGa < 1:1898035/150‑1 (MQ=255) ggcAGCGTCAACGCAAGCGCCCACGGCCTGTGGACCGAGGCGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCGGAGGATACCGCCCAGAAGGCGGAAAAGATCAAGCGCGCCGGGGAGTTCGACGTGACCGGGAACATGTTc < 2:113821/148‑1 (MQ=255) cAGCGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATccc > 1:1016965/1‑150 (MQ=255) aGCGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCg > 2:733853/1‑150 (MQ=255) gTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGt > 1:1912254/1‑149 (MQ=255) gTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACAGGATCCCGGt < 2:1912254/149‑1 (MQ=255) tCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCa > 1:743616/1‑150 (MQ=255) aCGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGACGATTACGCCTACAAGGCGGAAAAGATCGAGCGCGCCTGGGCGCTCGACGTGACCGGGAACATGATCCCGGTCACgg > 1:1867715/1‑150 (MQ=255) cGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCAGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGt < 2:1098446/150‑1 (MQ=255) cGCAGGCGCCCACGGCCTGTGCACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGt < 1:138889/150‑1 (MQ=255) cGCAGGCGCCCACGGCCTGCGGACCGAGGAGCGACGTGGCAATATCGAGGCAGTGTGCGACCACGGGCGCTATGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGt < 1:224894/150‑1 (MQ=255) ggCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAg < 1:459950/150‑1 (MQ=255) ccACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCt > 1:1788015/1‑150 (MQ=255) aCGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTgg > 2:894977/1‑150 (MQ=255) ggCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGGGCCAGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑g > 2:1159436/1‑150 (MQ=255) tgtgGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATc > 1:1551042/1‑150 (MQ=255) tgtgGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATc > 2:721026/1‑150 (MQ=255) gACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGc > 2:1827976/1‑150 (MQ=255) gaggagCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGtg > 2:568086/1‑150 (MQ=255) gagCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGATCATGTTCCCGGTc < 1:458002/117‑1 (MQ=255) gagCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGATCATGTTCCCGGTc > 2:458002/1‑117 (MQ=255) gCGACGTGGCAATATCGAGGCCGTGTACGTCCACGGCGCCGCGGGAAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTCCGACGTGACCCGGAACATGATCTCGGTCACGGACTCTCGCCTGGC‑GGCTCATGCCGGGCTGCa > 2:403211/1‑150 (MQ=255) gCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCa > 2:84226/1‑150 (MQ=255) gCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCa > 1:372907/1‑150 (MQ=255) aCGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAAcc < 1:1807226/150‑1 (MQ=255) cGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCa < 1:1071589/150‑1 (MQ=255) gCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGCAAACCGAATGCCGGTCCTGGTCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTa < 1:431508/150‑1 (MQ=255) aaTATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGTC‑GGATCATGCCGTGGTGCAACCACTTAcc > 1:1219960/1‑150 (MQ=255) tCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGt > 2:455927/1‑100 (MQ=255) tCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGt < 1:455927/100‑1 (MQ=255) aGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTg > 1:947821/1‑150 (MQ=255) aGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGCTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTg > 2:1408472/1‑150 (MQ=255) ccGTGTACGGCCACGGCGCCGAGGCTAACGCCTACACGGCGGAAAAGATCAAACGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCgg > 1:1184737/1‑150 (MQ=255) ggCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGcc < 2:1867715/150‑1 (MQ=255) ccACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGt < 2:1016965/150‑1 (MQ=255) gATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAAc > 1:1747646/1‑150 (MQ=255) gATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAAc > 2:1104121/1‑150 (MQ=255) tAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCGACCACTTACCCCGCCTGCGGCa < 2:1877501/127‑1 (MQ=255) tAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCGACCACTTACCCCGCCTGCGGCa > 1:1877501/1‑127 (MQ=255) aaCGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACggg < 1:721026/150‑1 (MQ=255) aCGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGc > 1:608109/1‑150 (MQ=255) cGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGcc > 1:75231/1‑150 (MQ=255) gCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCt > 2:1254666/1‑150 (MQ=255) ccTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTgctgct > 2:265011/1‑136 (MQ=255) ccTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTgctgct < 1:265011/136‑1 (MQ=255) cTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCAc > 1:847753/1‑104 (MQ=255) cTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCAc < 2:847753/104‑1 (MQ=255) cTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTg < 2:840958/150‑1 (MQ=255) cAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCGAGC‑GGCTCATGCCGTGCTGCAAGCATTGTCGCTGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGTTc > 1:1377546/1‑150 (MQ=255) aaGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTca > 2:603076/1‑150 (MQ=255) ggCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTcaca < 2:372907/150‑1 (MQ=255) cGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAgc < 2:1702225/150‑1 (MQ=255) aaaGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGccc > 2:1393589/1‑150 (MQ=255) aTCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAgc > 2:417546/1‑58 (MQ=255) aTCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAgc < 1:417546/58‑1 (MQ=255) aTCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTgg < 2:1804126/64‑1 (MQ=255) aTCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTgg > 1:1804126/1‑64 (MQ=255) aTCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGAc > 1:1784843/1‑150 (MQ=255) cAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCAGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACaa < 2:264280/150‑1 (MQ=255) cgcCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATg < 2:1551042/150‑1 (MQ=255) cgcCTGGGCGTTCGACGTCACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATg < 2:576491/150‑1 (MQ=255) gccgcggCGTTCGACGTGACCGGGACCATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACTACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGACACAGCGCCCGGACAAGCAATgg < 2:947821/145‑1 (MQ=255) gcCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑gg < 1:826975/58‑1 (MQ=255) gcCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑gg > 2:826975/1‑58 (MQ=255) gcCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATgg > 1:732149/1‑150 (MQ=255) cTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGt < 2:732149/150‑1 (MQ=255) cTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGt < 1:1393589/150‑1 (MQ=255) cTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAG‑AACTGTCTGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGt < 1:593791/150‑1 (MQ=255) tGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTATCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTc > 2:1183976/1‑150 (MQ=255) aggCGCTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCt > 1:1380978/2‑49 (MQ=255) aggCGCTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCt < 2:1380978/48‑1 (MQ=255) cGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATc > 2:1862255/1‑150 (MQ=255) ttCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAg < 1:1506401/150‑1 (MQ=255) cGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCg < 1:1159436/150‑1 (MQ=255) gACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCCCTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCAc < 1:259543/150‑1 (MQ=255) aCCGGGATCATGTTCCCGGTCAC‑GTCGAACGCCCGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGc < 2:1141565/82‑1 (MQ=21) aCCGGGATCATGTTCCCGGTCAC‑GTCGAACGCCCGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGc > 1:1141565/1‑82 (MQ=21) cGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCa > 2:1314780/1‑150 (MQ=255) cATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTATCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCATGTCaa < 1:1183976/150‑1 (MQ=255) cATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCATGTCaa < 1:821553/150‑1 (MQ=255) aTGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCATGTCAAg < 1:1104121/150‑1 (MQ=255) tGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCATGTCAAgg < 2:709993/150‑1 (MQ=255) aTCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCATGTCAAGGAt > 2:284751/1‑150 (MQ=255) aTCCCGGTCACGGTCGAGCGCCCAGA‑GGATCATTCCGGTCGTCAACCGCGTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCATGTCAAGGAt < 2:1451884/150‑1 (MQ=255) | TGGTCAGCGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGC‑GGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCATGTCAAGGAT > NC_002947/3762841‑3763139 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |