| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 292,607 | C→G | 5.4% | intergenic (+22/‑38) | ssuA → / → ssuD | aliphatic sulfonatesABC transporter substrate‑binding protein/alkanesulfonate monooxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 292,607 | 0 | C | G | 5.4% | 299.6 / 6.0 | 93 | intergenic (+22/‑38) | ssuA/ssuD | aliphatic sulfonatesABC transporter substrate‑binding protein/alkanesulfonate monooxygenase |
| Reads supporting (aligned to +/- strand): ref base C (42/46); new base G (3/2); total (45/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.71e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
CCCAGAGGTGGTGGCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCTGCAGCAGATCGCGCAG > NC_002947/292459‑292755 | cccAGAGGTGGTGGCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGcgcc > 2:1109836/1‑150 (MQ=255)cccAGAGGTGGTGGCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGcgcc > 2:709354/1‑150 (MQ=255)cccAGAGGTGGTGGCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGcgcc > 2:709355/1‑150 (MQ=255) ccAGAGGTGGTGGCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGcgccg > 1:1365146/1‑150 (MQ=255) gagGTGGTGGCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGccc < 1:545041/150‑1 (MQ=255) gtggtgGCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCgg < 1:1174717/150‑1 (MQ=255) tggtggCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGc > 1:1043133/1‑150 (MQ=255) ggCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTaga < 2:1878160/150‑1 (MQ=255) gCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGGCGCCCCGGcactgg < 2:1172014/150‑6 (MQ=255) gCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCCGCTGCACCCTGCGGTTAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTagag < 2:1484201/150‑1 (MQ=255) cgcAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCAc < 2:1601198/150‑1 (MQ=255) gcAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCAcc < 2:1385050/150‑1 (MQ=255) cAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGagccagcc < 1:1043553/150‑1 (MQ=255) cAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCAccc < 1:709355/150‑1 (MQ=255) cAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCAccc < 1:709354/150‑1 (MQ=255) agaagaTCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTg‑a < 1:1778874/150‑1 (MQ=255) agaagaTCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCAttca < 1:1006188/150‑3 (MQ=255) gaagaTCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATGTGGACACCCCCTGCCAAAGTCGCTCGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCGCCCTTg‑ag > 1:357310/1‑150 (MQ=255) gaagaTCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCAGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTg‑ag < 1:1467127/150‑1 (MQ=255) agaTCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTg‑agga < 2:130711/150‑1 (MQ=255) gaTCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTg‑aggag > 2:1145257/1‑150 (MQ=255) aTCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTg‑ag < 1:770359/146‑1 (MQ=255) aTCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTg‑ag > 2:770359/1‑146 (MQ=255) gCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAgacga < 2:607054/150‑1 (MQ=255) gACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTc < 1:1399590/150‑1 (MQ=255) gACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTc > 2:905366/1‑150 (MQ=255) cTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATg > 2:250088/1‑150 (MQ=255) ttCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCCAGGGCGTGATCTGGACACCCCCTGCCAAAGTAGCTAGCGCGCCTTGATTCACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGCCGGCTCCAATgg > 2:698222/1‑149 (MQ=255) ttCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGa > 1:111724/1‑150 (MQ=255) aGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCt > 2:1511388/1‑150 (MQ=255) aGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCt < 1:1145257/150‑1 (MQ=255) aGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCt > 2:426056/1‑150 (MQ=255) cTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACa < 1:426056/150‑1 (MQ=255) gCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCTGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTc > 2:1036828/1‑150 (MQ=255) gCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTc < 2:1248743/150‑1 (MQ=255) gCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTc > 1:1248743/1‑150 (MQ=255) tGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTg < 1:823677/150‑1 (MQ=255) gATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTgg < 2:1378753/150‑1 (MQ=255) cccAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTtcc > 2:1135480/1‑150 (MQ=255) ccAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGGCGCCCCGGcactgg > 2:1590003/1‑96 (MQ=255) ccAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGGCGCCCCGGcactgg < 1:1590003/101‑6 (MQ=255) ccAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGCATGA‑AGGACTCCAATGAGCCTTAACATTTTCTGGTtcct > 1:98798/1‑150 (MQ=255) ccAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTtcct > 2:484733/1‑150 (MQ=255) ccAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGATGGGTTTG‑AAATGACGACTCCAATGAGCCTTAACATTTTCTGGTtcct > 1:1867721/1‑150 (MQ=255) cAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTtcctc < 2:1043133/150‑1 (MQ=255) ccggcGCCGAGCATCAAGGACGTGACCTGGACACCCCCTACCAAAGGCGCTAGCGCGCCTTGATTGACCGCAAGTGCCGGGCCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGCGCCTTAACACTTTCTGGTtcctcc < 1:398197/146‑1 (MQ=255) aaGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTtcctcc < 1:484733/150‑1 (MQ=255) aaGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAATCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTtcctcc < 1:373210/150‑1 (MQ=255) aGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTccc > 2:43135/1‑150 (MQ=255) cGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCcccac > 2:169498/1‑150 (MQ=255) gCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCcccacc < 1:250088/150‑1 (MQ=255) aTCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTg > 1:1611393/1‑150 (MQ=255) ggACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATCGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGAGTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGc > 2:977630/1‑150 (MQ=255) tcGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTaga > 2:1355502/2‑79 (MQ=255) tcGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTaga < 1:1355502/78‑1 (MQ=255) cTGGACACCCCCTGCCAAAGTCGCTCGCGCGCCTTGATTGACTGCCCGTCCCGGGCCGCCGCCCCCGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTg < 1:698222/150‑1 (MQ=255) tGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTgg < 1:899276/150‑1 (MQ=255) tGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTgg < 1:8978/150‑1 (MQ=255) ggACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTggg > 2:361357/1‑150 (MQ=255) acCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTg‑a > 1:928588/1‑77 (MQ=255) acCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTg‑a < 2:928588/77‑1 (MQ=255) ccctcTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACg > 1:937731/1‑126 (MQ=255) ccctcTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACg < 2:937731/122‑1 (MQ=255) ccccTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTc > 1:67978/1‑150 (MQ=255) cccTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTg > 2:443092/1‑73 (MQ=255) cccTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTg < 1:443092/73‑1 (MQ=255) cccTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCCCATCTCGGGGCACTTcc > 2:1481769/1‑150 (MQ=255) cccTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTcc < 1:43135/150‑1 (MQ=255) tGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGaa < 2:1365146/150‑1 (MQ=255) ccAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAgg < 1:754074/150‑1 (MQ=255) gCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTg > 1:1556823/1‑150 (MQ=255) cTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACGTGGGCACTTCCGAAGGCGCACGTGc > 1:1220707/1‑150 (MQ=255) gcgcCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCg > 2:1879220/1‑150 (MQ=255) gcCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAgg > 2:1813533/1‑134 (MQ=255) gcCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAgg < 1:1813533/134‑1 (MQ=255) cTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTg < 1:869900/118‑1 (MQ=255) cTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTg > 2:869900/1‑118 (MQ=255) cTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCa > 1:44655/1‑150 (MQ=255) cTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACGTCCGAAGGCGCACGTGCGGTCGACCa > 1:1628763/1‑150 (MQ=255) tgattgaCTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACg < 2:729393/150‑1 (MQ=255) attgaCTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGa < 2:1199499/143‑1 (MQ=255) attgaCTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGa > 1:1199499/1‑143 (MQ=255) cTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCt < 1:1879220/150‑1 (MQ=255) tGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGc > 1:612910/1‑131 (MQ=255) tGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGc < 2:612910/131‑1 (MQ=255) tGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCt < 2:197950/149‑1 (MQ=255) tGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCt > 1:197950/1‑149 (MQ=255) tGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCTg < 2:30579/150‑1 (MQ=255) ccAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCTGTGCCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCTgca > 1:1553649/1‑150 (MQ=255) ccAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACACCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCTgca > 1:1787957/1‑150 (MQ=255) gCCGGGGCGGCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCTGCAGCAGa > 1:570827/1‑150 (MQ=255) gCCGGGGCGGCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCTGCAGCAGa > 2:1661382/1‑150 (MQ=255) gCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCTGCAGCAGa < 1:1036828/150‑1 (MQ=255) ccGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCGTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCTGCAGCAGAt > 1:814121/1‑150 (MQ=255) ccGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCTGCAGCAGAt > 1:811171/1‑150 (MQ=255) gggCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCaa < 1:1838178/90‑1 (MQ=255) gggCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCaa > 2:1838178/1‑90 (MQ=255) cgccgcCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCTGCAGCAGATCGCGCa < 1:977630/150‑1 (MQ=255) gccgccCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCTGCAGCAGATCGCGCAg > 2:1440780/1‑150 (MQ=255) | CCCAGAGGTGGTGGCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCGCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTG‑AGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCTGCAGCAGATCGCGCAG > NC_002947/292459‑292755 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |