| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,163,546 | T→G | 6.1% | intergenic (‑41/‑141) | pssA ← / → PP_3665 | CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/AraC family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,163,546 | 0 | T | G | 6.1% | 233.3 / 6.7 | 82 | intergenic (‑41/‑141) | pssA/PP_3665 | CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/AraC family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (36/41); new base G (2/3); total (38/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.65e-01 | |||||||||||
CGCTCGAACAGGCAGGCGCGGTAAGCCCTGGCATCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTGCACAGGAACAGCGCAATGGTC > NC_002947/4163399‑4163692 | cgcTCGAACAGGCAGGCGCGGTAAGCCCTGGCATCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCctgcctgc < 1:978413/150‑1 (MQ=255) tCGAACAGGCAGGCGCGGTAAGCCCTGGCATCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCcgg > 2:1238933/1‑150 (MQ=255) aggcaggcGCGGTAAGCCCTGGCATCGGGCAGCCCCTGGATCGCTTCGGGGGCCAGCTCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCCGCCGGCAGGCAGGGc < 1:1454174/150‑1 (MQ=255) aggcaggcGCGGTAAGCCCTGGCATCGGGCAGCACCTGGATCGCTTCGGGAGCGCTGGGGTAGCGTGGCAAGCCCGACAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCCGCCGGCAGGCAGGGc < 2:731324/150‑1 (MQ=255) gcaggcGCGGTAAGCCCTGGCATCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCggg > 2:1392885/1‑146 (MQ=255) gcaggcGCGGTAAGCCCTGGCATCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCggg < 1:1392885/146‑1 (MQ=255) gTAAGCCCTGGCATCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGcc < 2:177332/150‑1 (MQ=255) gTAAGCCCTGGCATCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGcc < 2:180850/150‑1 (MQ=255) gCCCTGGCATCGGGCAGCACCTGGAGCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGTGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTg < 2:561897/150‑1 (MQ=255) cccTGGCATCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGc > 1:121742/1‑150 (MQ=255) cccTGGCAGCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGCTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGc > 2:1538479/1‑150 (MQ=255) cTGGCATCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCAt > 1:23907/1‑150 (MQ=255) aTCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCt < 2:1118526/134‑1 (MQ=255) aTCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCt > 1:1118526/1‑134 (MQ=255) aTCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCggg < 1:597170/150‑1 (MQ=255) tCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTgg > 2:30847/1‑135 (MQ=255) tCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTgg < 1:30847/135‑1 (MQ=255) tCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCgggg > 1:996926/1‑150 (MQ=255) cGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGgt < 2:342216/150‑1 (MQ=255) cGGGCAGCACCTGGATCGCTGCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTCCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGgt < 2:5923/150‑1 (MQ=255) gggCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGgtg > 1:1008667/1‑150 (MQ=255) gcaCCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑Ga < 2:1131933/150‑1 (MQ=255) gcaCCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑Ga < 2:1131940/150‑1 (MQ=255) aCCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATc < 1:1213834/150‑1 (MQ=255) aCCTGGATCGCTTCGGGGGCCAGGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACCGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATc < 2:301698/150‑1 (MQ=255) aTCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCg > 2:1925947/1‑150 (MQ=255) cTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCaa > 1:664268/1‑150 (MQ=255) ttCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAAc > 1:1637057/1‑150 (MQ=255) ttgggggCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACg > 1:878923/3‑150 (MQ=255) gggCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGAccc < 2:1008667/150‑1 (MQ=255) ccATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATa > 2:109431/1‑150 (MQ=255) ccATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATa < 1:109431/150‑1 (MQ=255) taTGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATaa < 2:1126378/149‑1 (MQ=255) cATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATaa > 1:455908/1‑150 (MQ=255) cATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATaa < 2:1510498/150‑1 (MQ=255) tGGCGTAGCCTGGTAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATaaca > 2:1759234/1‑150 (MQ=255) tGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGCGTA‑T‑GATCGACCCGGCAACGACCCATaaca > 2:1325141/1‑150 (MQ=255) gCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATaacaac < 1:722523/150‑1 (MQ=255) gTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAAcaacaa < 1:838861/150‑1 (MQ=255) tAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAg < 2:1362886/150‑1 (MQ=255) tAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATCCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAg < 1:233844/150‑1 (MQ=255) gCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGaa < 2:121742/150‑1 (MQ=255) gCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGaa > 1:1042740/1‑150 (MQ=255) tGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCa > 2:749040/1‑150 (MQ=255) tGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCa > 2:1724974/1‑150 (MQ=255) cccGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGaa > 1:1447724/1‑140 (MQ=255) cccGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGaa < 2:1447724/140‑1 (MQ=255) cccGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCCGCCGGCAGGCAGGGc < 2:840186/78‑1 (MQ=38) cccGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCCGCCGGCAGGCAGGGc > 1:840186/1‑78 (MQ=38) ccAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGGCGTCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGctct > 1:1079228/1‑150 (MQ=255) aGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGc > 1:1659844/1‑150 (MQ=255) gCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCt < 2:1659844/150‑1 (MQ=255) tGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTtc < 1:1238933/150‑1 (MQ=255) ggTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTtct < 2:23907/150‑1 (MQ=255) tttCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCAG‑‑ACGTCTGAACTCCAGTCAAGCTAGCCGGCAACGACCCATAACAACAAGAACCACGCAAGGCTCTGCTTTCTCa > 1:431995/1‑150 (MQ=255) ggggTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATaacaac > 1:73182/1‑118 (MQ=255) ggggTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATaacaac < 2:73182/118‑1 (MQ=255) ggtgaaCTGATGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGccc > 2:1013342/6‑150 (MQ=255) ttCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCt < 1:1282475/150‑1 (MQ=255) cACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGa < 1:1925947/150‑1 (MQ=255) cACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGa < 2:621076/150‑1 (MQ=255) aCTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GAt < 2:1313704/86‑1 (MQ=255) aCTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GAt > 1:1313704/1‑86 (MQ=255) tGACGCTCACCTTCTCTTTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTtct < 2:240667/135‑1 (MQ=255) tGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTtct > 1:240667/1‑135 (MQ=255) gCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGaccaacca > 2:248527/1‑150 (MQ=255) tCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAgg > 1:1212876/1‑150 (MQ=255) cACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCGTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGc < 2:996926/150‑1 (MQ=255) tgttcctGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTc > 2:6820/6‑150 (MQ=255) cTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTc < 1:248527/150‑1 (MQ=255) ctGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCAGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCtt > 1:645937/1‑150 (MQ=255) tgtgCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTg < 2:1042740/150‑1 (MQ=255) aaTCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTtct > 2:1186654/1‑114 (MQ=255) aaTCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTtct < 1:1186654/114‑1 (MQ=255) aaTCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTGCACAg > 1:1840610/1‑150 (MQ=255) cACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTGCACAGGaa < 2:1840610/150‑1 (MQ=255) cTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTGCACAGGAACa < 1:6820/150‑1 (MQ=255) tGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCt < 2:482345/132‑1 (MQ=255) tGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCt > 1:482345/1‑132 (MQ=255) tGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTGCACAGGAACAg < 2:878923/150‑1 (MQ=255) tCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGaccaacca < 2:1753293/125‑1 (MQ=255) tCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGaccaacca > 1:1753293/1‑125 (MQ=255) ggCCCCGCCGGCAGGCAGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTGCACAGGAACAGCGCa > 2:1251229/1‑150 (MQ=255) cctgcctgCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTGCACAGGAACAGCGCAATg < 2:431995/150‑1 (MQ=255) tgcctgccGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCCACGACCCATAACACCAAGAAGGAGGGGAGGGTCTACTAGCACACGACCCCTACCCACCCAGCCCCCAGCTTGCACAGGCACACCGCCACGGt > 1:697904/1‑150 (MQ=255) tgcctgccGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGCGTA‑T‑GAACGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACGTCCCCTGACCAACCAGGCCTCAGCTTGCACAGGAACAGCGCAATGGt > 2:1298215/1‑150 (MQ=255) gcctgccGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTGCACAGGAACAGCGCAATGGTc < 2:664268/150‑1 (MQ=255) | CGCTCGAACAGGCAGGCGCGGTAAGCCCTGGCATCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTA‑T‑GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTGCACAGGAACAGCGCAATGGTC > NC_002947/4163399‑4163692 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |