| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,164,284 | A→T | 5.4% | K200* (AAG→TAG) ‡ | PP_3665 → | AraC family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,164,284 | 0 | A | T | 5.4% | 342.1 / 8.6 | 111 | K200* (AAG→TAG) ‡ | PP_3665 | AraC family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (51/54); new base T (2/4); total (53/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.99e-01 | |||||||||||
Only 100 of 111 total aligned reads displayed.
TTGCAGGCGCACTTCCCCGGTATCGTGATCTCCAGCCAGCTGTTCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGATCATGGAGGCCAATCTGGAGGAGCCGCTGGGGCT > NC_002947/4164137‑4164432 | ttGCAGGCGCACTTCCCCGGTATCGTGATCTCCAGCCAGCTGTTCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAg > 1:729709/1‑150 (MQ=255) gcACTTCCCCGGTATCGTGATCTCCAGCCAGCTGTTCGCACTGGACCGCNACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTTGCCCGCGACACGGGCGGCCAGGACATTGCGGCCAAGGCCGCCGa > 1:157970/1‑150 (MQ=255) gcACTTCCCCGGTATCGTGATCTCCAGCCAGCTGTTCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCTTGgccgcgat < 1:499590/150‑4 (MQ=255) gcACTTCCCCGGTATCGTGATCTCCAGCCAGCTGTTCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCTTGgccgcgat < 2:1685019/150‑4 (MQ=255) gcACTTCCCCGGTATCGTGATCTCCAGCCAGCTGTTCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGa < 1:197081/150‑1 (MQ=255) gcACTTCCCCGGTATCGTGATCTCCAGCCAGCTGTTCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGa > 2:1632842/1‑150 (MQ=255) aCTTCCCCGGTATCGTGATCTCCAGCCAGCTGTTCGAACTGGACCGCGACCGTTAGACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCTTGgccgcgat > 2:1022238/1‑145 (MQ=255) aCTTCCCCGGTATCGTGATCTCCAGCCAGCTGTTCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCTTGgccgcgat < 1:1022238/148‑4 (MQ=255) cTTCCCCGGTATCGTGATCTCCAGCCAGCTGTTCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCt < 2:384538/150‑1 (MQ=255) ttCCCCGGTATCGTGATCTCCAGCCAGCTGTTCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCTATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTg > 1:702751/1‑150 (MQ=255) ttCCCCGGTATCGTGATCTCCAGCCAGCTGTTCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTg > 2:746290/1‑150 (MQ=255) tCCCCGGTATCGTGATCTCCAGCCAGCTGTTCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGt < 1:1855978/150‑1 (MQ=255) tCCCCGGTATCGTGATCTCCAGCCAGCTGTTCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATAGCGGCCAAGGCCGCCGAGCTGt < 1:67143/150‑1 (MQ=255) cccGGTATCGTGATCTCCAGCCAGCTGTTCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTg > 2:805693/1‑150 (MQ=255) gTATCGTGATCTCCAGCCAGCTGTTCGAACTGGACTGAAACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCtgt < 2:448298/150‑1 (MQ=255) gTATCGTGATCTCCAGCCAGCTGTTCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCTATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCtgt < 2:702751/150‑1 (MQ=255) aTCGTGATCTCCAGCCAGCTGTTCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGc < 2:1432954/150‑1 (MQ=255) aTCGTGATCTCCAGCCAGCTGTTCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGc < 1:366028/150‑1 (MQ=255) aggTGATCTCCAGCCAGCTGTTCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCg > 1:1221495/3‑150 (MQ=255) tGATCTCCAGCCAGCTGTTCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGAcc > 1:1264430/1‑150 (MQ=255) tGATCTCCAGCCAGCTGTTCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATCGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGAcc < 2:1038993/150‑1 (MQ=255) gATCTCCAGCCAGCTGTTCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACcg > 2:674482/1‑150 (MQ=255) tcCAGCCAGCTGTTCGCACTGGACCGCGACCGTTACACCTGCTCNGGCGNCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACGAGGGCGCCAAGGCCGCCGAGCTGTTGCTGTGGGACCGCGTa > 1:18151/1‑150 (MQ=255) gccagcTGTTCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTAcgcg < 2:815284/150‑1 (MQ=255) cagcTGTTCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGgt < 1:657864/150‑1 (MQ=255) agcTGTTCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGgtg > 1:827853/1‑150 (MQ=255) ttCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGgtgagcgt < 1:1632842/150‑1 (MQ=255) cGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGgtgagcgtga < 1:674482/150‑1 (MQ=255) cGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGgtgagcgtga < 2:1550227/150‑1 (MQ=255) cGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGgtgagcgtga < 1:1612977/150‑1 (MQ=255) cTGGACCGCGACCGTTACACCTGTTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAgcgc < 2:729709/150‑1 (MQ=255) ggtaCCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGcc > 1:1221463/4‑150 (MQ=255) ggACCGCGACCTTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTg < 2:1503664/115‑1 (MQ=255) ggACCGCGACCTTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTg > 1:1503664/1‑115 (MQ=255) ggACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCa < 2:1109011/150‑1 (MQ=255) ggACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCa > 2:294459/1‑150 (MQ=255) gACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAg > 1:1703179/1‑150 (MQ=255) ccGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTAAGCGGTGAGCTTGAGCTCCAGCg > 2:585974/1‑150 (MQ=255) cgagACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCgt > 2:1818194/4‑150 (MQ=255) cGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCgtgt > 1:1611740/1‑146 (MQ=255) ttACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCTTGgccgc < 1:1227008/93‑1 (MQ=255) ttACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCTTGgccgc > 2:1227008/1‑93 (MQ=255) taacacCTGCGCAGGACGCGTCGCGGACACGGGCCTGATTGTGCAACTGTTGGCGCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCt < 2:18151/148‑1 (MQ=255) acacCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTgc < 2:1071714/150‑1 (MQ=255) acacCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGCTCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTgc < 1:881777/150‑1 (MQ=255) acCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGCGCGCCGGCGTGTGCCGCTgcgc > 2:125465/1‑150 (MQ=255) aGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGcc > 1:784936/1‑149 (MQ=255) gcgTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCa < 2:314074/150‑1 (MQ=255) gTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAgc > 1:1460704/1‑150 (MQ=255) ggcggcCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAgcgc > 2:1078742/1‑150 (MQ=255) gcggcCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATTGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCt < 2:1697196/150‑1 (MQ=255) ggcCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCa < 1:547710/131‑1 (MQ=255) ggcCATGGACATGATGTTGCAACCGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCa < 1:1120942/150‑1 (MQ=255) tttGGACATGAGGTTGCAACCGGTGGCCCGCGACAGGGGCGGCCAGGACATCGCGGCCACGGCCGCTGCGCTGTGGCTGTCCGACCGCGTGCGCGGTCAGCGTGACCGCCACACTGTGCCGCGGCGCACCGTGCTGGGCAGCCCTCAGcc < 2:827853/148‑1 (MQ=255) cATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCgtgt > 2:1599168/1‑117 (MQ=255) cATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCgtgt < 1:1599168/117‑1 (MQ=255) cATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCATcc < 1:648574/150‑1 (MQ=255) aTGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGccc > 2:1923239/1‑150 (MQ=255) aTGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGccc > 1:615216/1‑150 (MQ=255) gACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCaaa < 2:512184/150‑1 (MQ=255) aCATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAAc < 1:1132218/150‑1 (MQ=255) cATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGTGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACt > 1:1645085/1‑150 (MQ=255) atgatgTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCa > 1:1337344/1‑133 (MQ=255) atgatgTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCa < 2:1337344/133‑1 (MQ=255) tgatgTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGa < 2:1221463/150‑1 (MQ=255) tgatgTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGa < 2:1629440/150‑1 (MQ=255) tgTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGc < 1:1532212/138‑1 (MQ=255) tgTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGc > 2:1532212/1‑138 (MQ=255) ttGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCgt > 2:1472513/1‑102 (MQ=255) ttGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCgt < 1:1472513/102‑1 (MQ=255) cTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGgtgagcgtgag < 1:1085826/87‑1 (MQ=255) cTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGgtgagcgtgag > 2:1085826/1‑87 (MQ=255) cTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGgtggtg > 1:1328264/1‑150 (MQ=255) tggtggCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGtggtgg > 2:1071988/1‑150 (MQ=255) tggCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCCCCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGa < 1:805693/150‑1 (MQ=255) gCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGATc > 1:1880787/1‑150 (MQ=255) ccGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGATCAt > 2:1485108/1‑150 (MQ=255) ccGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGATCAt > 1:1175447/1‑150 (MQ=255) ccGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGCGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGATCAt > 2:1683560/1‑150 (MQ=255) cgcgACAGAGGCTGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGATCATg < 1:1021035/150‑1 (MQ=255) cgACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGATCATGGa < 2:1175447/150‑1 (MQ=255) gACACGGGCCGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGTCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGTTCATGGAg < 1:585974/150‑1 (MQ=255) acacGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGATCATGGAgg > 2:200932/1‑150 (MQ=255) acacGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGATCATGGAgg < 2:1460704/150‑1 (MQ=255) acacGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGATCATGGAgg < 2:52170/150‑1 (MQ=255) acacGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGATCATGGAgg > 1:1424844/1‑150 (MQ=255) gggCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGATCATGGAGGCCaa > 2:1583036/1‑150 (MQ=255) gggCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGAGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGATCATGGAGGCCaa > 1:417055/1‑150 (MQ=255) ccAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGc > 2:1805234/1‑107 (MQ=255) ccAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGc < 1:1805234/107‑1 (MQ=255) cAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGATCATGGAGGCCAATCTggag < 1:1485108/150‑1 (MQ=255) ggACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGATCATGGAGGCCAATCTggagga < 1:860062/150‑1 (MQ=255) gACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGCGCCAGGTGGTGGCGATCATGGATGCCAATCTGgaggag < 2:1221495/150‑1 (MQ=255) gACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGATCATGGAGGCCAATCTGgaggag > 1:1917332/1‑150 (MQ=255) aCATCGCGGCCAAGGCCGCCGAGCCGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGATCATGGAGGCCAATCTGGAGGAGc < 2:1707350/150‑1 (MQ=255) tCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGATCATGGAGGCCAATCTGGAGGAGCCGc > 1:1493384/1‑150 (MQ=255) tCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGATCATGGAGGCCAATCTGGAGGAGCCGc > 2:846095/1‑150 (MQ=255) ccAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGATCATGGAGGCCAATCTGGAGGAGCCGCTgg > 2:259999/1‑147 (MQ=255) ccAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGATCATGGAGGCCAATCTGGAGGAGCCGCTgg < 1:259999/147‑1 (MQ=255) cAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGATCATGGAGGCCAATCTGGAGGAGCCGCTGGGGCt < 1:720140/150‑1 (MQ=255) | TTGCAGGCGCACTTCCCCGGTATCGTGATCTCCAGCCAGCTGTTCGAACTGGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAGGCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCCAGGTGGTGGCGATCATGGAGGCCAATCTGGAGGAGCCGCTGGGGCT > NC_002947/4164137‑4164432 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |