| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,170,494 | C→A | 6.6% | R58S (CGC→AGC) | PP_3669 → | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,170,494 | 0 | C | A | 6.6% | 238.2 / 4.4 | 76 | R58S (CGC→AGC) | PP_3669 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (35/36); new base A (3/2); total (38/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.13e-01 | |||||||||||
TCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGAGTTCGACCCGGCCAACAGCTGCAACGTGTTCCGCCTGGGCCTTT > NC_002947/4170348‑4170641 | tCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTTCGGGATGCCCTCGCCCGCCTGCGCGAGCTTTTCGACGACCCGCTGCTGATCCGCa > 2:50475/1‑150 (MQ=255) gACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGc > 2:1571483/1‑150 (MQ=255) aCATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCg > 2:1442639/1‑150 (MQ=255) aCATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCg > 1:784200/1‑150 (MQ=255) aTGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGc < 2:1903424/150‑1 (MQ=255) tGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGATCTACGACCCGCTGCTGATCCGCAGCGGcc < 1:50475/150‑1 (MQ=255) ctgGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATg < 2:3436/150‑1 (MQ=255) tgGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCAt > 2:1744740/1‑148 (MQ=255) tgGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCAt < 1:1744740/148‑1 (MQ=255) gTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGaa < 2:1731513/150‑1 (MQ=255) gTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGaa < 2:523976/150‑1 (MQ=255) gCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAacc < 2:1230003/150‑1 (MQ=255) tGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAaccca > 1:1456657/1‑150 (MQ=255) tGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAaccca < 2:1388944/150‑1 (MQ=255) gAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAAcccacccca > 1:1055177/1‑150 (MQ=255) gatgatCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAt < 2:1723706/150‑1 (MQ=255) gatgatCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAt > 1:350307/1‑150 (MQ=255) gatCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCa > 2:671558/1‑150 (MQ=255) tCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGa > 2:476245/1‑150 (MQ=255) tCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCACGCCCGCGCGGGCTGTTCGCCGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGa > 2:1894246/1‑150 (MQ=255) gAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCGGATCAGCAGCgggtcgt < 1:1885538/118‑6 (MQ=255) gAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCGGATCAGCAGCgggtcgt > 2:1885538/1‑113 (MQ=255) cGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGGATGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCttt < 1:1771558/150‑1 (MQ=255) cAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGc < 1:1352934/150‑1 (MQ=255) ccgatctcccGCGTGGGTGCCGAGCTGTTTATCACCCAATCCCCCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGCTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCCCGGGCCAT‑GCAGATCTTTGCt < 2:440000/143‑1 (MQ=255) ccGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGACAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGagatcgg > 1:440000/1‑144 (MQ=255) ggggTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCgg < 2:1353328/149‑1 (MQ=255) tGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGGACTGGGCCCGGCCAt < 1:986084/150‑1 (MQ=255) tGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCAAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCAt > 1:464485/1‑150 (MQ=255) gAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGATCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAacccaccc > 2:998516/1‑109 (MQ=255) gAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAacccaccc < 1:998516/109‑1 (MQ=255) gAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATg < 2:494466/150‑1 (MQ=255) gTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGAt < 2:1364559/150‑1 (MQ=255) tttATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGAtt > 2:331512/1‑150 (MQ=255) tttATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGAtt < 1:331512/150‑1 (MQ=255) tttATCACCCAATCCACCGTCAGCGCCACCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGAtt > 2:1649261/1‑150 (MQ=255) aTCACCCAATCCACCGTCAGCGCCGCCCTCACCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCAGCAGCGGCCGGGc > 2:61963/1‑83 (MQ=255) aTCACCCAATCCACCGTCAGCGCCGCCCTCACCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCAGCAGCGGCCGGGc < 1:61963/83‑1 (MQ=255) aCCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTCTTCGCCGTCCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCt < 1:347046/150‑1 (MQ=255) cccAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTg > 2:359871/1‑150 (MQ=255) cccAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTg > 1:1389719/1‑150 (MQ=255) ccAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGc < 2:341837/150‑1 (MQ=255) aaTCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCa > 2:1660174/1‑150 (MQ=255) tCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAaccc < 1:959407/84‑1 (MQ=255) tCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAaccc > 2:959407/1‑84 (MQ=255) tCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTg > 1:87547/1‑135 (MQ=255) tCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTg < 2:87547/135‑1 (MQ=255) cACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCGGCTGATCCGCAGGGGCCGGGACATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGAATTACGCTGCCATCAg > 2:1053863/1‑150 (MQ=255) ccGTCAGGGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCACAGGGGTTCGGTAGTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGcc < 1:331282/150‑1 (MQ=255) cgccCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGa > 1:1274695/1‑150 (MQ=255) cgccCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGa < 2:784200/150‑1 (MQ=255) cTCGCCCGCCTGCGCGAGCTGTTCGACGACACGCTGCTGATCCACAGCATCAGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGAGTTc > 1:711965/1‑150 (MQ=255) cTCGCCCGCCTGCGCGAGCTGTTCGACAAGTCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGAGGTc > 1:1790593/1‑150 (MQ=255) ccgccTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGAGTTCGAccc > 1:775833/1‑150 (MQ=255) ccgccTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGAGTTCGAccc < 1:1649261/150‑1 (MQ=255) cgccTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGAGTTCGACCCg < 1:1352556/150‑1 (MQ=255) gccTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGAGTTCGACCCgg < 1:1190862/150‑1 (MQ=255) gccTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGAGTTCGACCCgg < 2:711965/150‑1 (MQ=255) gcgAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGAGTTCGACCCGGCCAACa > 1:62369/1‑150 (MQ=255) gTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGAGTTCGACCCGGCCAACAGCTGCaa > 2:484697/1‑150 (MQ=255) ttCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGAGTTCGACCCGGCCAACAGCTGCAAc < 2:1456657/150‑1 (MQ=255) gacgacCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGAGTTCGACCCGGCCAACAGCTGCAACgtg > 2:724897/1‑150 (MQ=255) acgacCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCGATGTACGCGTTTTCCGCTGCCATCAGCCGCGCCCGCGAGTTCGACCCGGCCAACAGCTGCAACgtgt > 1:431966/1‑150 (MQ=255) acgacCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGAGTTCGACCCGGCCAACAGCTGCAACgtgt < 1:1894246/150‑1 (MQ=255) cgacCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGAGTTCGACCCGGCCAACAGCTGCAACGTGtt < 1:671558/150‑1 (MQ=255) ccggccGCTGCGGATCAGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGAGTTCGACCCGGCCAACAGCTGCAACGTGtt > 2:1799257/5‑150 (MQ=255) ctccGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGAGTTCGACCCGGCCAACAGCTGCAACGTGTTcc < 2:330968/148‑1 (MQ=255) cccGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCt > 2:1445319/1‑97 (MQ=255) cccGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCt < 1:1445319/97‑1 (MQ=255) cccGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGAGTTCGACCCGGCCAACAGCTGCAACGTGTTCCg > 2:421515/1‑150 (MQ=255) cGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGAGTTCGACCCGGCCAACAGCTGCAACGTGTTCCGcc > 1:910506/1‑150 (MQ=255) cGCTGCTGATCCGCAGCGGCCGGGCCATGGAA‑CCAACGTACGGGGGATCGGAGTTCTTGGCTGAACTGGGCCCTGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGAGTTCGACCCGGCCAACAGCTGCAACGTGTTCCgag > 1:330968/1‑148 (MQ=255) gctgctGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGAGTTCGACCCGGCCAACAGCTGCAACGTGTTCCGCCt < 1:1338626/150‑1 (MQ=255) tgctgATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGAGTTCGACCCGGCCAACAGCTGCAACGTGTTCCGCCTgg < 1:359871/150‑1 (MQ=255) gATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGAGTTCGACCCGGCCAACAGCTGCAACGTGTTCCGCCTGGGCCt > 1:718981/1‑150 (MQ=255) tCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGAGTTCGACCCGGCCAACAGCTGCAACGTGTTCCGCCTGGGCCttt < 1:1442639/150‑1 (MQ=255) | TCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCCCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCAT‑GCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGCTGCCATCAGCCGCGCCCGCGAGTTCGACCCGGCCAACAGCTGCAACGTGTTCCGCCTGGGCCTTT > NC_002947/4170348‑4170641 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |