| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,353,932 | C→T | 7.8% | H338H (CAC→CAT) | yrpB → | 2‑nitropropane dioxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,353,932 | 0 | C | T | 7.8% | 283.2 / 9.5 | 99 | H338H (CAC→CAT) | yrpB | 2‑nitropropane dioxygenase |
| Reads supporting (aligned to +/- strand): ref base C (35/56); new base T (4/4); total (39/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 102 total aligned reads displayed.
ATGCGCGAGCTGGGGCCGATGAGCGAGCTTGCACCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTATCGCTATATAGTTAAGGCTATAACGATAACCTCAAGGAG > NC_002947/4353783‑4354078 | aTGCGCGAGCTGGGGCCGATGAGCGAGCTTGCACCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGcac > 2:547472/1‑150 (MQ=255) gcgcGAGCTGGGGCCGATGAGCGAGCTTGCACCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACAt < 1:468066/150‑1 (MQ=255) gcgAGCTGGGGCCGATGAGCGAGCTTGCACCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGc > 2:104355/1‑150 (MQ=255) gCTGGGGCCGATGAGCGAGCTTGCACCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCCGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCcggc > 2:1561290/1‑150 (MQ=255) ggggCCGATGAGCGAGCTTGCACCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCATGTGCcggccta < 1:1735317/150‑4 (MQ=255) gCCGATGAGCGAGCTTGCACCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGa > 1:849098/1‑150 (MQ=255) gCCGATGAGCGAGCTTGCACCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGa < 2:849098/150‑1 (MQ=255) cGATGAGCGAGCTTGCACCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGc < 2:1724487/150‑1 (MQ=255) cGATGAGCGAGCTTGCACCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGc < 2:1775303/150‑1 (MQ=255) gATGAGCGAGCTTGCACCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCt < 2:165623/150‑1 (MQ=255) gagcTTGCACCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCgg < 1:653844/150‑1 (MQ=255) agcTTGCACCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCggg < 2:1532297/150‑1 (MQ=255) gcTTGCACCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGga < 2:1602016/150‑1 (MQ=255) gcTTGCACCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGga < 2:114064/150‑1 (MQ=255) gCACCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGTCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGAtt < 1:1751681/150‑1 (MQ=255) gCACCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGAtt > 1:1139733/1‑150 (MQ=255) aCCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGc > 1:1228999/1‑150 (MQ=255) aCCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGc > 2:24018/1‑150 (MQ=255) ccGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGcc < 1:587455/150‑1 (MQ=255) ccGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATNGcc < 2:1198118/150‑1 (MQ=255) cTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTaa < 2:595329/150‑1 (MQ=255) cTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTaa < 2:1783735/150‑1 (MQ=255) cTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTaa < 2:1784040/150‑1 (MQ=255) ttCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGAACGCTCCCTTTGCCGCGGGGTATTTATGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCggagat > 2:65560/1‑146 (MQ=255) tCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAgg < 1:1801697/150‑1 (MQ=255) cccGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGc > 1:1920310/1‑150 (MQ=255) cGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCAt > 1:27991/1‑150 (MQ=255) gCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCAtt < 2:1139733/150‑1 (MQ=255) tGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTgg > 2:1663555/1‑150 (MQ=255) tGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGAACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTgg < 1:1460837/150‑1 (MQ=255) ccggctggGCATTGATGCCTTTACGCGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAACGCATTGGCAg < 1:1617606/148‑1 (MQ=255) gggcgggGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGt < 1:608515/150‑1 (MQ=255) gggcgggGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGt < 1:22349/150‑1 (MQ=255) cgggGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGAt < 2:1503199/150‑1 (MQ=255) gggCCTTGATGCCATTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCCTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGACGGTAAGGCATTGGCAGTGATCg < 2:946164/150‑1 (MQ=255) gggCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCg < 1:854446/150‑1 (MQ=255) ggCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGa < 1:45005/113‑1 (MQ=255) ggCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGa > 2:45005/1‑113 (MQ=255) gCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGGCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGt > 1:1567738/1‑150 (MQ=255) gCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTCCAGCAATCTGTGGTCGGGGCAGGCGTTACGTCTAGGCCGGCACATGCCGGCGCGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGt < 2:978627/150‑1 (MQ=255) aTGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCgg < 1:378502/111‑1 (MQ=255) aTGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCgg > 2:378502/1‑111 (MQ=255) aTGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAg < 1:319019/150‑1 (MQ=255) aTGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGCGATCGGTCACCAg > 1:912028/1‑150 (MQ=255) cTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGc < 1:671968/130‑1 (MQ=255) cTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGc > 2:671968/1‑130 (MQ=255) tttACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCATGTGCcggccta < 2:945196/93‑4 (MQ=255) tttACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCATGTGCcggccta > 1:945196/1‑90 (MQ=255) gggCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGAc > 2:443082/1‑150 (MQ=255) ggCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGAca > 1:925319/1‑150 (MQ=255) gATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGAcaggc > 1:1677587/1‑150 (MQ=255) aTCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCa < 1:1003559/134‑1 (MQ=255) aTCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCa > 2:1003559/1‑134 (MQ=255) tCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCATGTGCcggcc > 2:1680534/1‑79 (MQ=255) tCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCATGTGCcggcc > 2:1680205/1‑79 (MQ=255) tCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCATGTGCcggcc < 1:1680534/80‑2 (MQ=255) tCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCATGTGCcggcc < 1:1680205/80‑2 (MQ=255) cGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCTGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCAt > 1:1569535/1‑150 (MQ=255) cGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGAACATGCGCCAGGCATTCTGACAGGCAGGCAt < 1:988674/150‑1 (MQ=255) gagctgCAGTGTAAGGGTGATTGCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATg < 2:832950/145‑1 (MQ=255) tCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTGCGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGc < 2:1892628/150‑1 (MQ=255) tCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGc < 2:246690/150‑1 (MQ=255) tCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGc < 2:27991/150‑1 (MQ=255) tCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGc < 1:104355/150‑1 (MQ=255) tCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGc < 1:547472/150‑1 (MQ=255) gTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGa < 2:596646/128‑1 (MQ=255) gTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGa > 1:596646/1‑128 (MQ=255) aaGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACgg < 1:343119/150‑1 (MQ=255) gTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGga < 2:1452984/76‑1 (MQ=255) gTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGga > 1:1452984/1‑76 (MQ=255) ttCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCa < 2:192724/104‑1 (MQ=255) ttCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCa > 1:192724/1‑104 (MQ=255) cAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTTGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTa < 1:777527/150‑1 (MQ=255) aGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTAt < 1:1399084/150‑1 (MQ=255) aGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTAt > 2:1439259/1‑150 (MQ=255) tCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTATCGCta > 1:821015/1‑150 (MQ=255) tCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTATCGCta > 1:999586/1‑150 (MQ=255) ggTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTATCGCTATATAg < 2:130401/150‑1 (MQ=255) gTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTATCGCTATATAGt > 1:1775539/1‑150 (MQ=255) gTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTATCGCTATATAGt > 2:255833/1‑150 (MQ=255) ggggCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTATCGCTATATAGTTaa < 2:508233/150‑1 (MQ=255) ggggCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTATCGCTATATAGTTaa < 1:373281/150‑1 (MQ=255) gggCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTATCGCTATATAGTTAAg < 2:925319/150‑1 (MQ=255) ggCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTATCGCTATATAGTTAAgg < 1:443082/150‑1 (MQ=255) gCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTATCGCTATATAGTTAAgg > 2:1709652/1‑149 (MQ=255) gCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTATCGCTATATAGTTAAgg < 1:1709652/149‑1 (MQ=255) gCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAg > 1:1300174/1‑70 (MQ=255) gCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAg < 2:1300174/70‑1 (MQ=255) ttACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTATCGCTATATAGTTAAGGCTATAACg > 1:1088906/1‑150 (MQ=255) ggCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTATCGCTATATAGTTAAGGCTATAACGATaa < 2:507497/150‑1 (MQ=255) gCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTATCGCTATATAGTTAAGGCTATAACGATAAc < 1:24018/150‑1 (MQ=255) cTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTATCGCTATATAGTTAAGGCTATAACGATAAcc > 2:175752/1‑150 (MQ=255) tAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTATCGCTATATAGTTAAgg > 1:1600200/1‑135 (MQ=255) tAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTATCGCTATATAGTTAAgg < 2:1600200/135‑1 (MQ=255) ccgCCGGCATGTGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTATCGCTATATAGTTAAGGCTATAACGATAACCTc > 2:316507/3‑150 (MQ=255) ccGGCACATGCCGGCGGGTGCGCAGACCAGGGAGATCTTCTCTAAGGCGTTGGCATTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTATCGCTATATAGTTAAGGCTATAACGATAACCTCAAg < 2:1647314/150‑1 (MQ=255) gCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTATCGCTATATAGTTAAGGCTATAACGATAACCTCAAGGAg > 1:403778/1‑150 (MQ=255) gCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTATCGCTATATAGTTAAGGCTATAACGATAACCTCAAGGAg < 1:1062022/150‑1 (MQ=255) acaTGCCGGCGGGTGAGCTGACCCGTGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTATCGCTATATAGTTaa < 1:964020/124‑1 (MQ=255) acaTGCCGGCGGGTGAGCTGACCCGTGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGACCTCTTCACGGCCAATGGCTTATCGCTATATAGTTaa > 2:964020/1‑124 (MQ=255) | ATGCGCGAGCTGGGGCCGATGAGCGAGCTTGCACCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCAGGGTAAGAGTGATTTCAGCAATCTGTGGTCGGGGCAGGCGTTACGGCTAGGCCGGCACATGCCGGCGGGTGAGCTGACCCGGGAGATTGCCGGTAAGGCATTGGCAGTGATCGGTCACCAGGCATTCTGACAGGCAGGCATGGCCTCTTCACGGCCAATGGCTTATCGCTATATAGTTAAGGCTATAACGATAACCTCAAGGAG > NC_002947/4353783‑4354078 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |