| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,450,550 | T→G | 5.2% | V37G (GTG→GGG) | nicB → | nicotinate dehydrogenase subunit B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,450,550 | 0 | T | G | 5.2% | 328.3 / 5.4 | 113 | V37G (GTG→GGG) | nicB | nicotinate dehydrogenase subunit B |
| Reads supporting (aligned to +/- strand): ref base T (59/48); new base G (2/4); total (61/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.38e-01 | |||||||||||
Only 100 of 117 total aligned reads displayed.
TGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTACCTCGCTGGCGCAAATCGTCGCCGAAGAGCTGGACCTGC > NC_002947/4450401‑4450696 | tGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGt > 1:258379/1‑150 (MQ=255) gcgcCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGac < 1:385155/150‑1 (MQ=255) gTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTa < 2:1594025/150‑1 (MQ=255) gcgcCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACa < 2:395834/150‑1 (MQ=255) cgccgcGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGacac > 1:1600908/1‑144 (MQ=255) cgccgcGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGacac < 2:1600908/144‑1 (MQ=255) cgccgcGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAg < 2:784304/150‑1 (MQ=255) gcgcTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCaa < 2:1641560/150‑1 (MQ=255) ccGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACg < 1:1527419/150‑1 (MQ=255) cGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGt > 1:1331143/1‑150 (MQ=255) aCCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCaa > 1:1821500/1‑139 (MQ=255) aCCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCaa < 2:1821500/139‑1 (MQ=255) ccGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTg > 2:710444/1‑150 (MQ=255) ccGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGACAAGACCGGCGTGTTACGGGTCTACGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTg > 1:231722/1‑150 (MQ=255) cGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTgg > 1:130424/1‑150 (MQ=255) ggAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGgc < 1:1422483/150‑1 (MQ=255) agaAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGgcgc < 1:871231/150‑1 (MQ=255) aGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACAAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGtt < 2:1879425/150‑1 (MQ=255) ccATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCa < 1:441359/150‑1 (MQ=255) cATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCCAACGCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCAt > 1:20615/1‑150 (MQ=255) cATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCACGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCAt > 1:1809301/1‑150 (MQ=255) cATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGaa > 1:108325/1‑130 (MQ=255) cATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGaa < 2:108325/130‑1 (MQ=255) aCCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCgg > 2:1100/1‑150 (MQ=255) aCCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCgg < 2:197347/150‑1 (MQ=255) ccACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCACACCGGCAGGGCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGt > 1:118128/1‑150 (MQ=255) cACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTc > 1:777684/1‑150 (MQ=255) cACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTc > 1:624500/1‑150 (MQ=255) aCTTACAACAGGTACCCACCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCa > 2:176172/1‑150 (MQ=255) aCTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCa > 1:541741/1‑150 (MQ=255) tCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCTTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGt < 1:1228929/136‑1 (MQ=255) tCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGt > 2:1228929/1‑136 (MQ=255) tCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGc > 2:126497/1‑150 (MQ=255) acaacaGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGcga > 1:179111/1‑150 (MQ=255) agTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACgg > 2:1549042/2‑150 (MQ=255) gTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGc > 1:445804/1‑150 (MQ=255) gCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCaa < 1:858640/105‑1 (MQ=255) gCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCaa > 2:858640/1‑105 (MQ=255) gCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCAt > 1:42109/1‑150 (MQ=255) cccAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATg < 2:445804/150‑1 (MQ=255) ccAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATgg > 1:1748913/1‑150 (MQ=255) aGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTc > 2:1125288/1‑150 (MQ=255) ccGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTc > 2:1513801/1‑130 (MQ=255) ccGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTc < 1:1513801/130‑1 (MQ=255) aaCTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATc > 2:1736828/1‑116 (MQ=255) aaCTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATc < 1:1736828/116‑1 (MQ=255) aCTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCaa < 1:1125288/150‑1 (MQ=255) tgctgGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATg > 2:1649642/1‑150 (MQ=255) tgctgGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGAGCATCCAACCTACAGTCAAGGAGCGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATg < 1:1670944/150‑1 (MQ=255) tgGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTAAATgggc < 2:777684/150‑3 (MQ=255) gCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCAt > 1:919103/1‑150 (MQ=255) gCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCAt < 1:2044/150‑1 (MQ=255) aaGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTc < 1:766403/150‑1 (MQ=255) cGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAg > 1:1248337/1‑76 (MQ=255) cGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAg < 2:1248337/76‑1 (MQ=255) cGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCt > 2:1138100/1‑150 (MQ=255) tgtTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGt > 1:1819186/1‑77 (MQ=255) tgtTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGt < 2:1819186/77‑1 (MQ=255) ttGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACt < 1:1549042/150‑1 (MQ=255) gCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTgg < 1:153658/150‑1 (MQ=255) gATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGt < 1:1767907/48‑1 (MQ=255) cgACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTAc < 1:1255253/150‑1 (MQ=255) gACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTggtgatctggtcgacgatcagcaacacgccggtcttggccagcagttggtcgcggctgggcacctgttgtgagtg < 2:143917‑M2/116‑76 (MQ=255) gACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTAcc > 1:458327/1‑150 (MQ=255) aCCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCCTGTCGACCTGGGCACTGGCATCCGTACCt > 1:480396/1‑150 (MQ=255) aCCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTACCt > 1:853716/1‑150 (MQ=255) aCCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTACCt > 1:1111080/1‑150 (MQ=255) ccAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTACCTc > 1:1637699/1‑150 (MQ=255) gaGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGTCCGGGCATCCGGACcgcg < 2:417206/149‑1 (MQ=255) aGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTACCTCGc > 2:1395865/1‑150 (MQ=255) gATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTACCTCGCt < 2:373878/150‑1 (MQ=255) aTCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTACCTCGCTg < 2:1580700/150‑1 (MQ=255) aTCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTACCTCGCTg < 2:5788/150‑1 (MQ=255) aTCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTACCTCGCTg < 2:480396/150‑1 (MQ=255) aCCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTACCTCGCTGgcg > 1:1061883/1‑150 (MQ=255) cccGCCCTCAGGCCCTGTGGCCAAGGGCGTggtgatctggtcgacgatcagcaacacgccggtcttggccagcagttggtcgcgg > 1:898930‑M2/1‑30 (MQ=255) cccGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTa > 2:1707187/1‑38 (MQ=255) cccGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTa < 1:1707187/38‑1 (MQ=255) cccGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTACCTCGCTGGCGCa > 2:402031/1‑150 (MQ=255) cccGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTACCTCGCTGGCGCa > 2:588040/1‑150 (MQ=255) cccGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTACCTCGCTGGCGCa > 1:619226/1‑150 (MQ=255) cccGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTACCTCGCTGGCGCa > 2:317866/1‑150 (MQ=255) cccGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTACCTCGCTGGCGCa > 2:301855/1‑150 (MQ=255) cccGCCCTCAGGCCCTGTGGCCAAGGGCGGggtgatctggtcgacgatcagcaacacgccggtcttggccagcagttggtcgcggctgggcacctgttgtgagtggttcatggctttctccgggtctcggcagcgcggcgcacggcgcgc < 2:1052116‑M2/150‑121 (MQ=255) cccGCCATCAGGCCCTGTGGCCAAGGGCGTggtgatctggtcgacgatcagcaacacgccggtcttggccagcagttggtcgcgg < 2:898930‑M2/85‑56 (MQ=255) cGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATg > 2:199641/1‑105 (MQ=255) cGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATg < 1:199641/105‑1 (MQ=255) cGCCCTCAGGCCCTGTGGCCAAGGGCGGggtgatctggtcgacgatcagcaacacgccggtcttggccagcagttggtcgcggctgggcacctgttgtgagtggttcatggctttctccgggtctcggcagcgcggcgcacggcgcgcag > 2:940343‑M2/1‑28 (MQ=255) ccTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTACCTCGCTGGCGCAAAtcg < 1:1829030/150‑1 (MQ=255) tCAGGCCCTGTGGCCAAGGGCGGggtgatctggtcgacgatcagcaacacgccggtcttggccagcagttggtcgcggctgggcacctgttgtgagtggttcatggctttctccgggtctcggcagcgcggcgcacggcgcgcaggattt > 1:1052116‑M2/1‑23 (MQ=255) ggCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTACCTCGCTGGCGCAAATCGTCGcc > 2:132052/1‑150 (MQ=255) gCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACACCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTACCTCGCTGGCGCAAATCGTCGCCg > 1:1622311/1‑150 (MQ=255) cTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGt < 1:735198/79‑1 (MQ=255) tgtgGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTAc > 2:1741711/1‑123 (MQ=255) tgtgGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTAc < 1:1741711/123‑1 (MQ=255) gCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTACCTCGCTGGCGCAAATCGTCGCCGAAGAGCTg > 2:1574357/1‑150 (MQ=255) cAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTACCTCGCTGgc > 1:667693/1‑126 (MQ=255) cAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTACCTCGCTGgc < 2:667693/126‑1 (MQ=255) gggCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGACGACCTGAGAAATAACATTCATACCTCGATGGCGCAAATCGTGTTCGAAGATCTGGACCt < 2:20615/150‑1 (MQ=255) gCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTACCTCGCTGGCGCAAATCGTCGCCGAAGAGCTGGACCTgc < 2:1111080/150‑1 (MQ=255) | TGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAAGGAACGTGAGCTGGCGCTGTTCATCGCGGTCAGCGACGACGGCATGGTCTACGCCTTCAATGGTCATGTCGACCTGGGCACTGGCATCCGTACCTCGCTGGCGCAAATCGTCGCCGAAGAGCTGGACCTGC > NC_002947/4450401‑4450696 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |