| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,632,777 | C→T | 5.8% | A175T (GCC→ACC) | pgsA ← | CDP‑diacylglycerol‑glycerol‑3‑phosphate 3‑phosphatidyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,632,777 | 0 | C | T | 5.8% | 202.2 / 2.0 | 69 | A175T (GCC→ACC) | pgsA | CDP‑diacylglycerol‑glycerol‑3‑phosphate 3‑phosphatidyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (33/32); new base T (2/2); total (35/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.37e-01 | |||||||||||
CCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTCGTGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACCGGCGGGTTGCCCAGCAGGATCACCAGCGCCAGCATCTGCGCCGCAGTCTTCCACTTA > NC_002947/4632630‑4632925 | ccccGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTCGTGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTgcggccaggcgg > 2:1599570/1‑150 (MQ=255) cccGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTCTAGCCTCGTCGTGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTgcggccaggcggc < 1:1452839/150‑1 (MQ=255) cccGACCTTGGCAAGGTCGTGCGCTACCAACTGAGCTATTCCCGCGTCGTGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTgcggccaggcggc > 2:1115380/1‑150 (MQ=255) cacGACCTGGCCAAGGCCTTGCTCTACCACGTGATCTATTCCCGCGTCGCGATGGGTGCCATACTAGCGATTTCTAAAACAGCGTCAACCGCTTGATTCAACAAGCCTTTCTTTTTTTTCCGGGCCTTCTCGCCGGTgtggccagccggc > 2:307142/3‑150 (MQ=255) ttGGCCAGGTCGGTCTCTACCAACTGAGCTATTCCCGCGTCGTGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTCATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAgg < 2:567188/150‑1 (MQ=255) ggCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTCGTGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTa > 1:1706499/1‑150 (MQ=255) cAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTCGTGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGt > 1:31450/1‑150 (MQ=255) cAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTCGTGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGt > 1:313725/1‑150 (MQ=255) tCGTGCTCTACCAACTGAGCTATTCCCGGGTCGTGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCAcc > 1:991702/1‑150 (MQ=255) gTGCTCTACCAACTGAGCTATTCCCGCGTCGTGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGATCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCAt > 2:545179/1‑150 (MQ=255) tGCTCTACCAACTGAGCTATTCCCGCGTCGTGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATc < 2:555900/150‑1 (MQ=255) tctACCAACTGAGCTATTCCCGCGTCGTGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAgg < 1:775163/135‑1 (MQ=255) tctACCAACTGAGCTATTCCCGCGTCGTGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAgg > 2:775163/1‑135 (MQ=255) aCCAACTGAGCTATTCCCGCGTCGTGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGAc < 1:71756/147‑1 (MQ=255) aCCAACTGAGCTATTCCCGCGTCGTGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGAc > 2:71756/1‑147 (MQ=255) tGAGCTATTCCCGCGTCGTGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTc > 2:929208/1‑150 (MQ=255) aGCTATTCCCGCGTCGTGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAg < 2:1150643/150‑1 (MQ=255) tATTCCCGCGTCGTGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGTCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGccc > 1:545886/1‑150 (MQ=255) aTTCCCGCGTCGTGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGcccc < 2:94103/150‑1 (MQ=255) aTTCCCGCGTCGTGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGcccc < 1:545025/150‑1 (MQ=255) ttCCCGCGTCGTGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCg > 2:813195/1‑150 (MQ=255) tCCCGCGTCGTGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGc < 2:1874743/150‑1 (MQ=255) tGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTgcggccaggcggc < 2:34753/101‑1 (MQ=255) tGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTgcggccaggcggc > 1:34753/1‑101 (MQ=255) tGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACcagc > 2:1030880/1‑150 (MQ=255) tGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACcagc > 2:1033244/1‑150 (MQ=255) tGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGcc > 1:1893714/1‑150 (MQ=255) aTTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCAGAGCGTCAGCCCCGCTGCCACCTGCAGCAGCCCGTa < 1:1094829/150‑1 (MQ=255) tCTAGCGATTTCTAAAACAGCGTCAACCACTTGCACAAAGAAACTTTTA‑TTTTTTTCCGAGGCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGcc < 2:1401071/150‑1 (MQ=255) tAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGccc > 2:560434/1‑150 (MQ=255) aGCGATTTCTAAAACAGCGTCAACCCCTTGATTCACAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCa < 2:1893714/150‑1 (MQ=255) aGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCa < 1:1878479/150‑1 (MQ=255) aTTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGAt > 1:1898568/1‑150 (MQ=255) cTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTACTTTTTCCTGTAACCATCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCAcc > 1:331105/1‑150 (MQ=255) tAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGTTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCAccc > 2:695072/1‑150 (MQ=255) aaaCAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCCGCAGCAGCCCGTAGCCCAGGATCAccc > 1:1368748/1‑148 (MQ=255) aaaCAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCAccc < 2:1368748/148‑1 (MQ=255) aCAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCa > 1:297734/1‑86 (MQ=255) aCAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCa < 2:297734/86‑1 (MQ=255) cAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAg < 1:1318968/150‑1 (MQ=255) cAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAg < 1:545179/150‑1 (MQ=255) aaCCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTcacca < 2:313725/150‑1 (MQ=255) aaCCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTcacca > 2:906884/1‑150 (MQ=255) aaCCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTcacca < 2:31450/150‑1 (MQ=255) ccccTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCaccacc > 1:1616560/1‑150 (MQ=255) cccTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACcg > 2:1185196/1‑150 (MQ=255) cTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTCCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACcggc > 1:1610236/1‑150 (MQ=255) ttCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGAc > 1:1544680/1‑76 (MQ=255) ttCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGAc < 2:1544680/76‑1 (MQ=255) cAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACCGGCGGGTTGc < 2:895293/150‑1 (MQ=255) aaaaaaCTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGTCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACCGGCGGGTTGcc < 2:545886/150‑1 (MQ=255) aaaaaaCTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCATAAGGTCACCACCGGCGGGTTGcc > 2:713096/1‑150 (MQ=255) aaaaaaCTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACCGGCGGGTTGcc < 1:929208/150‑1 (MQ=255) aaaaaCTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGTGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACcggcgg > 1:1144338/1‑143 (MQ=255) aaaaaCTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGTGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACcggcgg > 1:1146019/1‑143 (MQ=255) aaaaaCTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGTGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACcggcgg < 2:1144338/143‑1 (MQ=255) aaaaaCTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGTGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACcggcgg < 2:1146019/143‑1 (MQ=255) aaaaCTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCAc < 1:1631569/121‑1 (MQ=255) aaaaCTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCAc > 2:1631569/1‑121 (MQ=255) aaaCTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACCGAGTCAGCCCCGCTGCCACCAGTAAAGGCTTCCATGCTATAAGCACCCAGAAGGTCACCACCGGCGGGTTGCCcag < 1:1773814/150‑1 (MQ=255) aCTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACCGGCGGGTTGCCcagca < 2:1706499/150‑1 (MQ=255) aCTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACCGGCGGGTTGCCcagca < 1:813195/150‑1 (MQ=255) ttttATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACCGGCGGGTTGCCCAGCAgg < 1:1293432/150‑1 (MQ=255) tttATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACCGGCGGGTTGCCCAGCAGGa < 2:991702/150‑1 (MQ=255) ttATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTGTTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACCGGCGGGTTGCCCAGCAGGAt > 1:1787740/1‑150 (MQ=255) aTTTTTTTGCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACCGGCGGGTTGCCCAGCAGGATCa < 2:786728/150‑1 (MQ=255) ttttttttCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACCGGCGGGTTGCCCAGCAGGATCAc < 1:1030880/150‑1 (MQ=255) gAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACCGGCGGGTTGCCCAGCAGGATCACCAGCGCCAGc > 1:854020/1‑150 (MQ=255) aGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCTCATCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACCGGCGGGTTGCCCAGCAGGATCACCAGCGCCAgta > 1:1079656/1‑148 (MQ=255) aGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACCGGCGGGTTGCCCAGCAGGATCACCAGCGCCAGCa > 2:1105167/1‑150 (MQ=255) ccTTCGCGCAGGTGCGGCCAAGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCATAGCCCAGGATCACCCAGAAGGTCACCACCGGCGGCTTGCCCAGCGGGCTCACCAGCGCCAGCATc > 2:417297/1‑150 (MQ=255) cTTCGCGCAGGTGCGGCCAGGCGGCAAGATTGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACCGGCGGGTTGCCCAGCAGGATCACCAGCGCCAGCATCt > 1:1297179/1‑150 (MQ=255) cTTCGCGCAGGGGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGCAGCCCAGGATCACCCAGAAGGTCACCACCGGCGGGTTGCCCAGCAGGATCACCAGCGCCAGCATCt < 1:401921/150‑1 (MQ=255) gcgcAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACCGGCGGGTTGCCCAGCAGGATCACCAGCGCCAGCATCTgcgc > 2:153251/1‑150 (MQ=255) tGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACCGGCGGGTTGCCCAGCAGGATCACCAGCGCCAGCATCTGCGCCGCAGTc < 1:1061274/150‑1 (MQ=255) ggccaggcggccagCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACCGGCGGGTTGCCCAGCAGGACCACCAGCGCCAGCATCTGCGCCGCAGTCTTc > 1:1759741/1‑150 (MQ=255) aggcggccagCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACCGGCGGGTTGCCCAGCAGGATCACCAGCGCCAGCATCTGCGCCGCAGTCTTCCACt > 1:827220/1‑150 (MQ=255) gcggccagCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACCGGCGGGTTGCCCAGCGGGATCACCAGCGCCAGCATCTGCGCCGCAGTCTTCCACTTa < 1:1599570/150‑1 (MQ=255) gcggccagCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACAAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACCGGCGGGTTGCCCAGCAGGATCACCAGCGCCAGCATCTGCGCCGCAGTCTTCCACTTa < 2:1297179/150‑1 (MQ=255) | CCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTCGTGATGGGTGCCATTCTAGCGATTTCTAAAACAGCGTCAACCCCTTGATTCAAAAAACTTTTATTTTTTTTCCGAGCCTTCGCGCAGGTGCGGCCAGGCGGCCAGCAGGTAGTGCACCATCGACCACAGCGTCAGCCCCGCTGCCACCAGCAGCAGCCCGTAGCCCAGGATCACCCAGAAGGTCACCACCGGCGGGTTGCCCAGCAGGATCACCAGCGCCAGCATCTGCGCCGCAGTCTTCCACTTA > NC_002947/4632630‑4632925 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |