| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,891,919 | T→C | 7.6% | Y346H (TAC→CAC) | ttuD → | hydroxypyruvate reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,891,919 | 0 | T | C | 7.6% | 211.5 / 6.6 | 82 | Y346H (TAC→CAC) | ttuD | hydroxypyruvate reductase |
| Reads supporting (aligned to +/- strand): ref base T (38/35); new base C (3/3); total (43/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.45e-01 | |||||||||||
TTCAACACGGCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACAACAACAACGGCTACGGCTACTTCGCC > NC_002947/4891773‑4892068 | ttCAACACGGCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACg > 1:1893619/1‑150 (MQ=255) aaCACGGCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTTCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGccc > 2:6842/1‑150 (MQ=255) aaCACGGCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGccc > 1:1530672/1‑150 (MQ=255) aaCACGGCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGGCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTCACGCCGACTGCCTCCGCAGCCTCACCGAAAACCTCAAAGCCCTGCC‑GGGCGCGGCCGccc > 2:337450/1‑150 (MQ=255) acacGGCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCAGGGCGTACACGccc > 1:655612/1‑150 (MQ=255) acGGCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTACACGcccggc > 2:1333405/1‑147 (MQ=255) acGGCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTACACGcccggc > 2:1333523/1‑147 (MQ=255) ggCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCNGCCTCANCGAAAGCCTGAAAGGCCTGCC‑GGGCGTACACGcccggnag < 1:1333405/150‑6 (MQ=255) ggCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTACACGcccggcag < 1:1333523/150‑6 (MQ=255) gCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCAGGGCGTACACGcccggcag < 2:655612/150‑6 (MQ=255) gCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCg < 2:60908/150‑1 (MQ=255) gCCAGCCGCGCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCg < 1:443817/150‑1 (MQ=255) cAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGt < 1:840939/150‑1 (MQ=255) cAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCGGCTCAGCCTCACCGACAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCGGGt < 2:274579/150‑1 (MQ=255) cGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGaca < 1:1653197/150‑1 (MQ=255) gCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGacac < 2:34722/150‑1 (MQ=255) cTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACAcc > 2:1244387/1‑150 (MQ=255) cAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGa < 1:1244387/150‑1 (MQ=255) aaaGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGAc < 2:970594/150‑1 (MQ=255) aaGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACg < 2:58073/150‑1 (MQ=255) aaGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTACC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACg < 1:340959/150‑1 (MQ=255) ccTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTAc > 2:476257/1‑122 (MQ=255) ccTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTAc < 1:476257/122‑1 (MQ=255) ccTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCg > 2:1132813/1‑150 (MQ=255) ccTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGCGTACGCCCTGGCCGGTGACACCGACGGCATCg > 2:1318313/1‑150 (MQ=255) gCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATg < 2:1854430/150‑1 (MQ=255) aTCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGacg > 1:1137507/1‑143 (MQ=255) aTCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGacg < 2:1137507/145‑3 (MQ=255) aTCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCg > 1:1247080/1‑150 (MQ=255) tCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCgg < 2:403485/150‑1 (MQ=255) ccTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGga < 1:1919443/150‑1 (MQ=255) ccTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGga < 1:579310/150‑1 (MQ=255) cTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGTAAGTCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGgaa > 1:1755579/1‑150 (MQ=255) cTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGgaa > 1:1740268/1‑150 (MQ=255) cTGTCGGGTGGCGAAACCACCGTGACCGTGCGAGGGAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAGATCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGgaa > 1:151907/1‑150 (MQ=255) gCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCg > 2:399962/1‑150 (MQ=255) gCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCg > 1:474792/1‑150 (MQ=255) gCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCg > 1:1764880/1‑150 (MQ=255) gAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCAGAACGTGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGt < 1:1060085/150‑1 (MQ=255) gAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGAc < 2:1451314/120‑1 (MQ=255) gAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGAc > 1:1451314/1‑120 (MQ=255) gAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGt > 1:1085527/1‑150 (MQ=255) caccGTGACCGTGCGCGGCTATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGCAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCtt > 2:337649/1‑150 (MQ=255) cgtgaccgtgCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCAt > 2:1774592/1‑150 (MQ=255) ccgtgCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGAccc < 2:1530672/150‑1 (MQ=255) ggCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGc > 2:727875/1‑150 (MQ=255) aaTGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTAc > 2:281885/1‑150 (MQ=255) tGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTg < 1:1655305/79‑1 (MQ=255) tGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTg > 2:1655305/1‑79 (MQ=255) gCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCa < 1:399962/150‑1 (MQ=255) ccGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAg > 1:1167453/1‑150 (MQ=255) gggcgTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGaa > 1:791422/1‑150 (MQ=255) aaCGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTg > 2:1517773/1‑150 (MQ=255) aCGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTgg < 2:1105069/150‑1 (MQ=255) aCGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTgg < 2:474792/150‑1 (MQ=255) gcagcgTTCCTGCTAAGCCTGACCGATAGCCTGAAATTCCGTCC‑GGGGGGGTACGCCCTGGCCGGAGACACCGACGGAATCGATCGCCCGGACGAACGCGCCGGTGGCTTTCTGACCCCCGCCAGCTACGCCAGCGCCGAAGCCTTGGGc > 2:1859086/6‑150 (MQ=255) gCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGt > 1:783198/1‑105 (MQ=255) gCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGt < 2:783198/105‑1 (MQ=255) aacGAGTTCCTCCTCAGCTTCACCGAAATCCGGAAGCGCCGGCC‑GGGCCTGTACGTCCTGGCCGGTGACACCGACAACATCGATGGCGCGGAAGAAAACGNCGGTNCCTTCATGACCCCGNCAAGCTACGCCAGCGCCGAAGCCCTGGGc < 1:57874/148‑1 (MQ=255) gAGTTCCTGCTCAGGCCAACCGAAAGACTGAAAGGCCTGCC‑GGGCCTGACCGTCCTGAACGGTGACACCGATGGCATCGATGGCCCGGGAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTg > 2:828450/1‑150 (MQ=255) gTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTTGACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTc < 1:108039/150‑1 (MQ=255) ttCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCg < 1:1114794/150‑1 (MQ=255) ttCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCg > 2:520355/1‑150 (MQ=255) cTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTCCGCCCTGGCAGGCAAAACCGACGGCATCGATGTGTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGc > 1:1673420/1‑150 (MQ=255) aGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACATCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGcgac < 2:56449/150‑1 (MQ=255) gttCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGAGGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGcgacga > 2:675534/3‑150 (MQ=255) cTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAg > 1:524131/1‑150 (MQ=255) tgaCCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGCAGAAAACGCCGGTGCCTTCATGACCCCTGCCAGCTACTCCTGCGCCTAAGCCTTGGGCCTGTCGGCCAGcgacgacc > 2:1534056/3‑148 (MQ=255) tCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTg < 2:72604/128‑1 (MQ=255) tCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTg > 1:72604/1‑128 (MQ=255) tCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGc > 2:1445679/1‑150 (MQ=255) tCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGc < 1:727875/150‑1 (MQ=255) acACCGAAAGACTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAACCGCCGGTGCCTTCATGCCCATGGCCAGCTACGTCAGCGCCGAACCCTTGTGCTTGTCGGCCATCGACGAGc < 2:1755579/149‑1 (MQ=255) cccGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTg < 1:1528242/149‑1 (MQ=255) aCCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGTGAGCTACGGGAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTg < 1:1774592/150‑1 (MQ=255) tGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTc > 2:1429846/1‑80 (MQ=255) tGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTc < 1:1429846/80‑1 (MQ=255) ggCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGcc > 2:1771547/1‑102 (MQ=255) ggCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGcc < 1:1771547/102‑1 (MQ=255) gCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACAACAACAacggct > 2:1445074/1‑150 (MQ=255) cc‑GGGCGTGTACGCCCTGGCCGGTGCCACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCCATCGATGTAACCTTGCGGCCAGCGACGAGCTGGACAACAACAacggctacggc < 1:799672/150‑1 (MQ=255) gggCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACAACAACAAcggctacggcta > 2:1557144/1‑150 (MQ=255) tgtACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACAACAACAACGGCTACGGCTACTTcg < 1:339162/150‑1 (MQ=255) tACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACAACAACAACGGCTACGGCTACTTcgcc > 2:139578/1‑150 (MQ=255) | TTCAACACGGCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCC‑GGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCAGCTACGCCAGCGCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACAACAACAACGGCTACGGCTACTTCGCC > NC_002947/4891773‑4892068 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |