New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2429960	21 (0.370)	9 (0.210)	9/200	3.7	38.5%	intergenic (+47/+66)	PP_2129/PP_2130	hypothetical protein/lytic transglycosylase
	?	NC_002947	= 2429975	13 (0.310)					intergenic (+62/+51)	PP_2129/PP_2130	hypothetical protein/lytic transglycosylase
Rejected: Coverage evenness skew score above cutoff.

GACTTTCCGCGAAAAAGAAGGCGACGTGCTGTTCGGCCAGAACCTGGCTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGACCGCTCAAACCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGTACAGGCTCAACAGCAATCACATGTCATCGAAATACCGTTCATGCCAATCCACCAATGGCTGCGGTGAATTCAGCTTCTGCCCGTA  >  NC_002947/2429811‑2430094                                                                                                                                                      |                                                                                                                                       gACTTTCCGCGAAAAAGAAGGCGACGTGCTGTTCGGCCAGAACCTGGCTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACaa                                                                                                                                        <  2:1286318/150‑1 (MQ=255)        cgcgAAAAAGAAGGCGACGTGCTGTTCGGCCAGAACCTGGCTGTGGATGGCAGTGGGGGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACaagggtttg                                                                                                                                 >  1:1149120/1‑143 (MQ=255)                     gCGACGTGCTGTTCGGCCAGAACCTGGCTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGACCGCTCAAACCCTTGTa                                                                                                                    <  1:885472/150‑1 (MQ=255)                          gTGCTGTTCGGCCAGAACCTGGCTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGACCGCTCAAACCCTTGTAGGAGc                                                                                                               <  1:1283393/150‑1 (MQ=255)                          gTGCTGTTCGGCCAGAACCTGGCTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGACCGCTCAAACCCTTGTAGGAGc                                                                                                               <  1:915905/150‑1 (MQ=255)                            gCTGTTCGGCCAGAACCTGGCTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGACCGCTCAAACCCTTGTAGGAGCgg                                                                                                             <  1:1233295/150‑1 (MQ=255)                                   ggCCAGAACCTGGCTGTGGAAGGCAGAGGGTGGCCGTACGTGGGGATGGAAGTAGCAATACTAGCATCTACGTTTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGACCGCTCAAACCCTTGTAGGAGCGGGTTCAcc                                                                                                      <  1:725623/150‑1 (MQ=25)                                           ccTGGCTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGACCGCTCAAACCCTTGTAGGAGCGGGTTCACCCGCGAaga                                                                                              <  1:1250530/150‑1 (MQ=255)                                            cTGGCTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGACCGCTCAAACCCTTGTAGGAGCGGGTTCACCCGCGAagag                                                                                             <  2:263026/150‑1 (MQ=255)                                                                                               cTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGACCGCTCAAACCCTTg                                                                                                                      >  1:835136/1‑74 (MQ=255)                                                                                               cTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGACCGCTCAAACCCTTg                                                                                                                      <  2:835136/74‑1 (MQ=255)                                                                                                                       cGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGACCGCTCAAACCCTTGTAg                                                                                                                   <  2:1240472/53‑1 (MQ=255)                                                                                                                       cGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGACCGCTCAAACCCTTGTAg                                                                                                                   >  1:1240472/1‑53 (MQ=255)                                                                                                                              ttCGCGGGTGAACCCGCTCCTACAACGACCGCTCAAACCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGTACAGGCTCAACAGCAATca                                                                    <  1:377407/93‑1 (MQ=255)                                                                                                                              ttCGCGGGTGAACCCGCTCCTACAACGACCGCTCAAACCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGTACAGGCTCAACAGCAATca                                                                    >  2:377407/1‑93 (MQ=255)                                                                                                                                    ggTGAACCCGCTCCTACAACGACCGCTCAAACCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGTACAGGCTCAACAGCAATCACATGTCATCGAAATACCGTTCATGCCAATCCACCAATGGCTGCGGt                      >  1:798023/1‑133 (MQ=255)                                                                                                                                    ggTGAACCCGCTCCTACAACGACCGCTCAAACCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGTACAGGCTCAACAGCAATCACATGTCATCGAAATACCGTTCATGCCAATCCACCAATGGCTGCGGt                      <  2:798023/133‑1 (MQ=255)                                                                                                                                     gTGAACCCGCTCCTACAACGACCGCTCAAACCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGTACAGGCTCAACAGCAATCACATGTCATCGAAATACCGTTCATGCCAATCCACCAATGGCTGCg                        >  1:246996/1‑130 (MQ=255)                                                                                                                                     gTGAACCCGCTCCTACAACGACCGCTCAAACCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGTACAGGCTCAACAGCAATCACATGTCATCGAAATACCGTTCATGCCAATCCACCAATGGCTGCg                        <  2:246996/130‑1 (MQ=255)                                                                                                                                                   aCAACGACCGCTCAAACCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGTACAGGCTCAACAGCAATCACATGTCATCGAAATACCGTTCATGCCAATcca                                    <  1:756671/104‑1 (MQ=255)                                                                                                                                                   aCAACGACCGCTCAAACCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGTACAGGCTCAACAGCAATCACATGTCATCGAAATACCGTTCATGCCAATcca                                    >  2:756671/1‑104 (MQ=255)                                                                                                                                                    cAACGACCGCTCAAACCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGTACAGGCTCAACAGCAATCACATGTCATCGAAATACCGTTCATGCCAATCCACCAATGGCTGCGGTGAATTCAGCTTCTGCCCGTa  >  2:1162292/1‑137 (MQ=255)                                                                                                                                                    cAACGACCGCTCAAACCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGTACAGGCTCAACAGCAATCACATGTCATCGAAATACCGTTCATGCCAATCCACCAATGGCTGCGGTGAATTCAGCTTCTGCCCGTa  <  1:1162292/137‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                       GACTTTCCGCGAAAAAGAAGGCGACGTGCTGTTCGGCCAGAACCTGGCTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGACCGCTCAAACCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGTACAGGCTCAACAGCAATCACATGTCATCGAAATACCGTTCATGCCAATCCACCAATGGCTGCGGTGAATTCAGCTTCTGCCCGTA  >  NC_002947/2429811‑2430094

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.