Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,988,9450CA46.5% 102.8 / 112.1 101intergenic (+183/‑363)kefB‑III/PP_mr64glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
Reads supporting (aligned to +/- strand):  ref base C (21/33);  new base A (22/25);  total (43/58)
Fisher's exact test for biased strand distribution p-value = 5.45e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 102 total aligned reads displayed.

TGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTC  >  NC_002947/5988798‑5989090
                                                                                                                                                    |                                                                                                                                                  
tgtgAGATTGGGCTCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCt                                                                                                                                                  <  2:176680/150‑1 (MQ=255)
   gagaTCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGAC‑CGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTggt                                                                                                                                               <  2:791169/150‑2 (MQ=11)
           gcgcCGCGCGGGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGAC‑CGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCag‑gagg                                                                                                                                      <  1:113292/150‑1 (MQ=9)
           gcgcCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACag‑gagg                                                                                                                                      >  1:446427/1‑150 (MQ=255)
           gcgcCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGAC‑CGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCag‑gagg                                                                                                                                      <  2:1197005/150‑1 (MQ=14)
             gccgccCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGa                                                                                                                                    <  2:219424/150‑1 (MQ=255)
             gccgccCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGAC‑CGCCTTGGGGCATGTCTCGATATCGCGTCGTACAGACAAGGCGGTCGCGCGCGACTg                                                                                                                                                 <  2:847210/138‑1 (MQ=9)
             gccgccCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGAC‑CGCCTTGGGGCATGTCTCGATATCGCGTCGTACAGACAAGGCGGTCGCGCGCGACTg                                                                                                                                                 >  1:847210/1‑138 (MQ=9)
                 cccgcGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTgg                                                                                                                                <  2:252854/150‑1 (MQ=255)
                    gcgcgGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCa                                                                                                                             <  1:450032/150‑1 (MQ=255)
                    gcgcgGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCa                                                                                                                             <  2:184374/150‑1 (MQ=255)
                     cgcgGCGCTTCGCGTGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGAC‑CGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTgg                                                                                                                                                >  2:93958/1‑131 (MQ=9)
                     cgcgGCGCTTCGCGTGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGAC‑CGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTgg                                                                                                                                                <  1:93958/131‑1 (MQ=9)
                       gggcgCTTCGCGGGGAACCCCGATCCTACGTGTGTGTCGGGCCAATTATTCCTGCGGAATTTGCGCGCGAC‑CGCCTGGGGGCATGGCTCGATATCGCGTCGTACAAACACGGCGGCCGCGCGCGACTGGTGCAG‑GAGGGACTGGccgaag                                                                                                                          <  2:1179287/149‑5 (MQ=12)
                        ggcgCTTCGCGGGTAAACCCGCTCGTGCGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGGCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGaaa                                                                                                                         <  2:490203/150‑1 (MQ=255)
                        ggcgCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGaaa                                                                                                                         <  2:446427/150‑1 (MQ=255)
                            cTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGaaacaca                                                                                                                     <  2:20209/150‑3 (MQ=255)
                            cTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGaaacaaa                                                                                                                     >  1:20209/1‑150 (MQ=255)
                            cTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCAAGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGaaacaaa                                                                                                                     <  1:671861/150‑1 (MQ=255)
                            cTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGAC‑CGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGTGCGCGACTGGTGCAG‑GAGGGACTGGCC‑Gaaacaaac                                                                                                                    <  2:421983/150‑1 (MQ=12)
                             ttCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCTAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGaaacaaac                                                                                                                    <  1:607558/150‑1 (MQ=255)
                               cgcgGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGAC‑CGCCTTGGGGCATGTCTCGATATCGCCTTGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTa                                                                                                                 <  2:888319/150‑1 (MQ=2)
                                gcgGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGAC‑CGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAg                                                                                                                <  2:145683/150‑1 (MQ=2)
                                  gggTAAACCCGCTCCTACGTTTGTTTCTGGCCAATTATTCCTGCGGGATTTGCGCGCGAC‑CGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGa                                                                                                              >  2:1342043/1‑150 (MQ=2)
                                       aaCCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCgg                                                                                                          <  1:471408/150‑1 (MQ=255)
                                        aCCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCggg                                                                                                         <  1:1198024/150‑1 (MQ=255)
                                         cccGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGt                                                                                                        >  1:280647/1‑150 (MQ=255)
                                         cccGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGAC‑CGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGtt                                                                                                       >  1:47162/1‑150 (MQ=2)
                                          ccGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCTCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGtt                                                                                                       >  1:313898/1‑150 (MQ=255)
                                          ccGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAg                                                                                                                >  1:1013000/1‑141 (MQ=255)
                                          ccGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAg                                                                                                                <  2:1013000/141‑1 (MQ=255)
                                          ccGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGtt                                                                                                       >  1:993758/1‑150 (MQ=255)
                                          ccGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGAC‑CGCCTTGGGGCATGTCTCGATATCGCGTCGTACAACCAAGGCGGTCGCGCGCGACT‑GAACAGATATTAAGTGGCC‑GAAACAAACGTAGGAGCGGGttt                                                                                                      >  2:331068/1‑150 (MQ=12)
                                            gCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGAC‑CGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAc                                                                                                    <  2:462840/150‑1 (MQ=2)
                                             cTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAc                                                                                                    >  1:1045830‑M2/1‑149 (MQ=255)
                                              tCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGAC‑CGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAccc                                                                                                  <  2:1120469/150‑1 (MQ=2)
                                                cTACGTTTTTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGAC‑CGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCcgc                                                                                                <  2:1349424/150‑1 (MQ=2)
                                                cTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccg                                                                                                 >  1:473191‑M2/1‑146 (MQ=255)
                                                cTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccg                                                                                                 >  2:436735‑M2/1‑146 (MQ=255)
                                                cTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGAC‑CGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGCCTGGCC‑GAAACAAACGTAGGAGCGGCTTTACCcgc                                                                                                >  2:461263/1‑150 (MQ=2)
                                                cTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGAC‑CGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGCCGCGCGCGACTGGTGCAG‑GAGGGACTGACC‑GGAACAAACGTAGGAGCGGGttccgccgc                                                                                                >  2:31953/1‑143 (MQ=255)
                                                    gtttgtttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGAATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaa                                                                                             <  2:80552‑M2/150‑9 (MQ=255)
                                                    gtttgtttCGGGCCAATTATTCCTGCGGGATTTGCGCGCGAC‑CGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAg                                                                                            >  1:534602/1‑150 (MQ=14)
                                                    gtttgtttCGGGCCAATTATTCCTGCGGGATTTGCGCGCGAC‑CGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAg                                                                                            >  1:1373213/1‑150 (MQ=9)
                                                      ttgtttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCa                                                                                                                             >  1:410856/1‑116 (MQ=255)
                                                      ttgtttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCa                                                                                                                             <  2:410856/116‑1 (MQ=255)
                                                      ttgtttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagc                                                                                           <  1:38136‑M2/150‑11 (MQ=255)
                                                        gtttCGGGCCAATTATTCCTGCGGGATTTGCGCGCGGC‑CGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGAGTTGTGCAG‑GAGGGTCTGAGC‑CAACCAAACGTAGGAGCGGGTTTACCCGCGCAGcgcc                                                                                        >  2:330802/1‑150 (MQ=2)
                                                         tttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCCCGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgcc                                                                                        <  2:639034‑M2/150‑14 (MQ=255)
                                                         tttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgcc                                                                                        <  1:653333‑M2/150‑14 (MQ=255)
                                                             gggCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGc                                                                                                                               >  1:410302/1‑107 (MQ=255)
                                                             gggCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGc                                                                                                                               <  2:410302/107‑1 (MQ=255)
                                                              ggCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAATGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcccg                                                                                   <  2:334309‑M2/150‑19 (MQ=255)
                                                              ggCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcg                                                                                   <  2:1053797‑M2/150‑19 (MQ=255)
                                                                ccAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcggg                                                                                 <  1:321220‑M2/150‑21 (MQ=255)
                                                                ccAATTATTCCTGCGGGATTTGCGCGCGAC‑CGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCgcgggc                                                                                >  2:470950/1‑150 (MQ=2)
                                                                   gTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACag‑ga                                                                                                                                        <  1:745916/92‑1 (MQ=255)
                                                                   gTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACag‑ga                                                                                                                                        >  2:745916/1‑92 (MQ=255)
                                                                    ttATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggc                                                                             <  2:947397‑M2/150‑25 (MQ=255)
                                                                      aTTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGAATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcccgcgcggcgc                                                                           >  1:80552‑M2/1‑124 (MQ=255)
                                                                           tgtgGGACGCGCACGCGAGCCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGc                                                                                                            <  1:344372/113‑1 (MQ=255)
                                                                           tgtgGGACGCGCACGCGAGCCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGc                                                                                                            >  2:344372/1‑113 (MQ=255)
                                                                           tgtgGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAATGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcccgcgcggcgcttcgc                                                                      >  1:334309‑M2/1‑119 (MQ=255)
                                                                                       gcgcgaC‑CGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctg                                                         <  1:1068516‑M2/149‑45 (MQ=255)
                                                                                               cccccTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAAc                                                   >  2:462682/1‑150 (MQ=255)
                                                                                                gccttGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacag                                                               <  1:473503‑M2/135‑39 (MQ=255)
                                                                                                 ccgTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgaactggctgcgctcgatctcacaggcgctgaaaatcctc                                                >  1:330802‑M2/1‑97 (MQ=255)
                                                                                                 cccTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTa                                                 <  2:321220/150‑1 (MQ=255)
                                                                                                  cttggGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctcc                                               >  2:47162‑M2/3‑96 (MQ=255)
                                                                                                  cttggGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctcc                                               >  1:931548‑M2/3‑96 (MQ=255)
                                                                                                   cTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATc                                               <  1:462682/150‑1 (MQ=255)
                                                                                                          aCGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGc                                        >  1:132783/1‑150 (MQ=255)
                                                                                                           tgtctcgATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacac                                      <  2:192662‑M2/147‑64 (MQ=255)
                                                                                                            gtctcGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctca                                                                  >  2:1250548‑M2/3‑86 (MQ=255)
                                                                                                            gtctcGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctca                                                                  <  1:1250548‑M2/119‑36 (MQ=255)
                                                                                                             tctCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacct                                    <  1:643519‑M2/149‑66 (MQ=255)
                                                                                                             tctCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaa                                          >  2:886865‑M2/2‑85 (MQ=255)
                                                                                                             tctCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaa                                          <  1:886865‑M2/143‑60 (MQ=255)
                                                                                                              cTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGaaacaaac                                                                                                                    >  1:1058653/1‑70 (MQ=255)
                                                                                                              cTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGaaacaaac                                                                                                                    <  2:1058653/70‑1 (MQ=255)
                                                                                                               tCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcccaggcgctgaaactctcccggcgaacacctcc                                  >  1:1342043‑M2/1‑83 (MQ=255)
                                                                                                                cGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcccgcg                                                                                 >  1:601336‑M2/1‑82 (MQ=255)
                                                                                                                cGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcccgcg                                                                                 <  2:601336‑M2/102‑21 (MQ=255)
                                                                                                                  atatCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGaa                                <  2:653333/150‑1 (MQ=255)
                                                                                                                     ccgcaccggacaaacAAGGCGGTCGCGCGCGACTGGTGCAG‑CAGGGGCTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattc                            >  2:534602‑M2/7‑77 (MQ=255)
                                                                                                                             tACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCa                     >  2:7096/1‑150 (MQ=255)
                                                                                                                             tACAAACAAGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccg                    <  2:170373‑M2/150‑82 (MQ=255)
                                                                                                                                aaacaaGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCa                                           >  2:295607/1‑125 (MQ=255)
                                                                                                                                aaacaaGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCa                                           <  1:295607/125‑1 (MQ=255)
                                                                                                                                aaacaaGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCCCGCGCGGCGCttcgc                                                                      <  1:61474/97‑5 (MQ=17)
                                                                                                                                aaacaaGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCCCGCGCGGCGCttcgc                                                                      >  2:61474/1‑93 (MQ=17)
                                                                                                                                 aacaaGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctagatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtcca                <  1:1065401‑M2/150‑86 (MQ=255)
                                                                                                                                  acaaGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTc                <  2:313898/150‑1 (MQ=255)
                                                                                                                                  acaaGGCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatcccacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtccac               <  2:339314‑M2/150‑87 (MQ=255)
                                                                                                                                      ggCGGTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtccactcaa           <  1:1041655‑M2/150‑91 (MQ=255)
                                                                                                                                       gCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGTGCGCCCAAAAAc                                                   <  2:1134127/110‑1 (MQ=255)
                                                                                                                                       gCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGTCCGCCCAAAAAc                                                   >  1:1134127/1‑110 (MQ=255)
                                                                                                                                          gTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgt                   <  1:1342649‑M2/138‑83 (MQ=255)
                                                                                                                                          gTCGCGCGCGACTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgt                   >  2:1342649‑M2/1‑56 (MQ=255)
                                                                                                                                               gcgcgaCTGGTGCAG‑GAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtccactcaaaattccaac  >  1:192662‑M2/1‑51 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
TGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAG‑CCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAG‑GAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTC  >  NC_002947/5988798‑5989090

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑