New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 200407 | 58 (0.870) | 19 (0.410) +AGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCAT |
11/184 | 3.8 | 33.5% | coding (5913/26049 nt) | PP_0168 | putative surface adhesion protein |
? | NC_002947 | = 217036 | 51 (0.770) | coding (22542/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
Rejected: Coverage evenness skew score above cutoff. |
GCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACAAGACCCCGGTCAGCACCGCCGTGACCGA > NC_002947/216887‑217185 | gcgACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTg < 1:972218/150‑1 (MQ=255) ttCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGc > 2:1139862/1‑150 (MQ=38) cGGTAACCGAAGGCGGCGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTa < 2:1079954/150‑1 (MQ=39) gTAACCGAAGGCGGCGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTAcc < 1:1216628/150‑1 (MQ=38) gTAACCGAAGGCGGCGAGATCACCTACACCATCACCCCATTCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGGCCTGCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTAcc < 1:14940/150‑1 (MQ=11) gcggcgAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGccc > 1:657704/1‑150 (MQ=35) cgcgaTCACCTACACCATCACCCTGACCAACAAAGAGGGTCTGCCAATCAACAACCACAGTTCATTGACCTTCACCCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGa < 1:352194/147‑1 (MQ=255) gaTCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACaa < 2:385659/150‑1 (MQ=35) gaTCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACaa > 2:126519/1‑150 (MQ=35) tCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCATCTCGGCCAACCGGATCGTGGTTACTATTACCCTCACTGCCCCGGACAACg > 2:602066/1‑150 (MQ=11) cACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGt > 1:1092445/1‑150 (MQ=35) aCCTACACCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTc > 1:949166/1‑150 (MQ=35) ccTACACCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCt > 1:106308/1‑150 (MQ=35) cacCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTTTACGt > 1:276290/1‑150 (MQ=25) cATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGc > 1:633787/1‑129 (MQ=35) cATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGc < 2:633787/129‑1 (MQ=35) ccTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTgg > 2:910337/1‑104 (MQ=33) ccTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTgg < 1:910337/104‑1 (MQ=33) caaAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCtgt > 1:89441/1‑150 (MQ=35) aTGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCa > 1:1495342/1‑150 (MQ=34) ggTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCaaa < 1:1256966/150‑1 (MQ=32) tCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAatc > 2:1032592/1‑150 (MQ=32) tGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAatcga > 1:1283166/1‑150 (MQ=32) gCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCaaa > 2:604190/1‑145 (MQ=32) gCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCaaa < 1:604190/145‑1 (MQ=32) cAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAatcgatcg > 1:1455300/1‑150 (MQ=31) aaTCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAat < 1:1433631/143‑1 (MQ=11) aaTCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAat > 2:1433631/1‑143 (MQ=11) aaTCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGc > 1:62223/1‑150 (MQ=11) cacaGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTggc > 2:165251/1‑150 (MQ=31) aTTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGa > 1:898033/1‑150 (MQ=38) aCCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGCCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGAGCGCAACCGTTGGCGGCGCGGATGtt < 1:1139862/150‑1 (MQ=255) ccTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTCCGTCGGTACCAACGACCATGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTg < 2:644771/150‑1 (MQ=255) cTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGAGGATGTTGGCAAGTTc < 2:657704/150‑1 (MQ=255) tGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCg > 2:1221877/1‑150 (MQ=255) cGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGAAACACCCTAGGGCGGTACCAACAACTCGGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACa < 1:1032592/150‑1 (MQ=17) cGGCAAAACCGTCATCACCCTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCt < 2:1092445/150‑1 (MQ=255) cAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAACCGATAGCAACCGTTGGCGGCGCGGAGGATGGCAAGTTCGAACAGCTGac > 2:601487/1‑150 (MQ=255) aaaaCCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGaca > 2:708841/1‑150 (MQ=255) ccGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTgg < 2:457497/150‑1 (MQ=255) cGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGCTCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGa > 2:1174182/1‑150 (MQ=255) cGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGa < 2:106308/150‑1 (MQ=255) cGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGa < 1:601487/150‑1 (MQ=255) gTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACAAGACCCCg < 2:336306/150‑1 (MQ=255) gTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACAAGACCCCg < 1:126519/150‑1 (MQ=255) cGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGa < 2:153447/136‑1 (MQ=255) cGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGa > 1:153447/1‑136 (MQ=255) ggCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACaa > 1:609034/1‑138 (MQ=255) ggCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACaa < 2:609034/138‑1 (MQ=255) cAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACAAGACCCCGGTCAGCAc > 2:1534550/1‑150 (MQ=255) ggCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACAAGACCCCGGTCAGCAccgcc > 2:172279/1‑150 (MQ=255) gggCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACAAGACCCCGGTCAGCACCGCCGTGACcga < 2:949166/150‑1 (MQ=255) | GCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACAAGACCCCGGTCAGCACCGCCGTGACCGA > NC_002947/216887‑217185 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |