New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6032808 =	70 (1.050)	16 (0.320)	15/200	3.1	25.3%	intergenic (+16/+120)	dppA‑IV/PP_5284	dipeptide transport protein/hypothetical protein
	?	NC_002947	6032890 =	42 (0.840)					intergenic (+98/+38)	dppA‑IV/PP_5284	dipeptide transport protein/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.

GGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCAACGACA  >  NC_002947/6032741‑6033037                                                                                                                                                       |                                                                                                                                                    ggTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGaaa                                                                                                                                                     <  1:557114/150‑1 (MQ=255)     aGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGc                                                                                                                                                 <  1:1643161/150‑1 (MQ=255)       cccGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGccc                                                                                                                                               >  2:1392505/1‑150 (MQ=255)          gTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTa                                                                                                                                            <  1:355052/150‑1 (MQ=255)           tgcGGGCGGCTGGATTTCAGCAAGGAGACGGCGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCGGGCCGTGAAAGCAA‑CCCCGGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTAc                                                                                                                                           <  1:1533961/148‑1 (MQ=37)                gcggcTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGAcc                                                                                                                                      <  2:797908/150‑1 (MQ=255)                   gcTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCta                                                                                                                                   >  1:1245437/1‑150 (MQ=255)                       gATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGGCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGCTTTACCCGCGAATGGGCCCGTACTGACCCTCTAAg                                                                                                                               >  1:222985/1‑150 (MQ=255)                        aTTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAgg                                                                                                                              <  1:534243/150‑1 (MQ=255)                         tttCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGc                                                                                                                             >  2:598492/1‑150 (MQ=255)                                 aGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTa                                                                                                                     <  1:366099/150‑1 (MQ=255)                                      acggtgacCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTccc                                                                                                                <  2:413509/150‑1 (MQ=255)                                         gtgacCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCa                                                                                                             <  2:1521063/150‑1 (MQ=255)                                             ccAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGAcc                                                                                                         >  2:989452/1‑150 (MQ=255)                                              cAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCATGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACca                                                                                                        <  2:1463970/150‑1 (MQ=255)                                                    aGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATcc                                                                                                  >  2:1139181/1‑150 (MQ=255)                                                     gCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCa                                                                                                 <  1:244682/150‑1 (MQ=255)                                                      ccTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAg                                                                                                                                                    <  2:125526/98‑1 (MQ=255)                                                      ccTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAg                                                                                                                                                    <  2:126107/98‑1 (MQ=255)                                                      ccTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAg                                                                                                                                                    >  1:126107/1‑98 (MQ=255)                                                      ccTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAg                                                                                                                                                    >  1:125526/1‑98 (MQ=255)                                                           aCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATg                                                                                           <  1:1139181/150‑1 (MQ=255)                                                              ggCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGACCAAGCCAGG‑AACTAACGAGATCGGCTGTAGAAACGTGTGTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTc                                                                                        >  1:1449562/1‑150 (MQ=255)                                                                 ctctTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGAc                                                                                     >  2:1044727/1‑150 (MQ=255)                                                                  tctTCGCGGGTAAACCCGCTCCTACAGGGGGAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGGTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGAcc                                                                                    >  2:1610861/1‑150 (MQ=255)                                                                              aaCCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGc                                                                        >  2:760299/1‑150 (MQ=255)                                                                                cccGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTc                                                                      <  1:760299/150‑1 (MQ=255)                                                                                cccGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTc                                                                      <  1:967487/150‑1 (MQ=255)                                                                                cccGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTc                                                                      >  2:967487/1‑150 (MQ=255)                                                                                  cGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTccc                                                                    >  1:667935/1‑150 (MQ=255)                                                                                    cTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCa                                                                  >  2:954059/1‑150 (MQ=255)                                                                                        tACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCAc                                                              <  1:598492/150‑1 (MQ=255)                                                                                        tACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCAACCCATGCTCGACCATCGACAACGGCTCCCCATCAc                                                              >  2:1094600/1‑150 (MQ=255)                                                                                            ggggTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAat                                                          >  2:252556/1‑150 (MQ=255)                                                                                                  gcgcCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgatgat                                                    <  1:954059/150‑1 (MQ=255)                                                                                                  gcgcCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgatgat                                                    <  1:1392505/150‑1 (MQ=255)                                                                                                        gCCTGGCAGTTGACGCTA‑CCCCTGTACCAGCGGCTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATc                                              <  1:240611/150‑1 (MQ=255)                                                                                                           tGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACcaca                                                                                                      >  1:540110/1‑91 (MQ=255)                                                                                                           tGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACcaca                                                                                                      <  2:540110/91‑1 (MQ=255)                                                                                                             gCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTcccc                                                                   >  1:304061/1‑124 (MQ=255)                                                                                                             gCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTcccc                                                                   <  2:304061/124‑1 (MQ=255)                                                                                                                 ttGACGCTA‑CCCCTGTAGAAGCGGGTTTACCCGAGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCg                                     >  2:71308/1‑150 (MQ=255)                                                                                                                         a‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACatcaa                             >  1:1308602/1‑150 (MQ=255)                                                                                                                         a‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTCACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCAGGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACatcaa                             <  1:252556/150‑1 (MQ=255)                                                                                                                               tGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAAc                        >  1:317955/1‑150 (MQ=255)                                                                                                                                 tAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGc                      >  1:799179/1‑150 (MQ=255)                                                                                                                                      gCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGAc                                                                              <  2:1556970/89‑1 (MQ=255)                                                                                                                                      gCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGAc                                                                              >  1:1556970/1‑89 (MQ=255)                                                                                                                                      gCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGcc                 >  1:1413671/1‑150 (MQ=255)                                                                                                                                          gTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAat                                                          >  1:1418048/1‑105 (MQ=255)                                                                                                                                          gTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAat                                                          <  2:1418048/105‑1 (MQ=255)                                                                                                                                              aCCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTc         <  1:1259462/150‑1 (MQ=255)                                                                                                                                              aCCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTc         <  1:1044727/150‑1 (MQ=255)                                                                                                                                                ccGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAAc                                                                           >  1:1330975/1‑82 (MQ=255)                                                                                                                                                ccGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAAc                                                                           <  2:1330975/82‑1 (MQ=255)                                                                                                                                                ccGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCaa       >  1:170006/1‑150 (MQ=255)                                                                                                                                                     aaaGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCAACGACa  <  2:1413671/150‑1 (MQ=255)                                                                                                                                                       |                                                                                                                                                    GGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTA‑CCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCAACGACA  >  NC_002947/6032741‑6033037

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.