New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 796843 | 29 (1.540) | 5 (0.310) | 5/214 | NT | 15.6% | intergenic (+42/‑148) | PP_0681/PP_0682 | hypothetical protein/inner membrane protein |
? | NC_002947 | = 796881 | 29 (1.780) | intergenic (+80/‑110) | PP_0681/PP_0682 | hypothetical protein/inner membrane protein |
ATGGTTATCAAGTGGCCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/796680‑796843 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgcgacacaaggccACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCGGCATTCTTCAGGTCTCAGGATGAAACTGGTAATCCCCCAGGTTGCGACACCGCTCACCATTGATCCGCCGCAACTG < NC_002947/796881‑796733 ATGGTTATCAAGTGGCCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCAT > 1:366044/1‑150 TCAAGTGGCCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACA > 2:191123/1‑150 TGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTG > 2:92833/1‑150 AGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGG < 1:92833/150‑1 GCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGA > 1:288163/1‑103 GCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGA < 2:288163/103‑1 CGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTG < 2:99333/150‑1 ATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGG < 1:506512/97‑1 ATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGG > 2:506512/1‑97 TGAGCGGTGTCACAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATC > 2:254761/1‑78 TGAGCGGTGTCACAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATC < 1:254761/78‑1 GAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTG < 2:336034/74‑1 GAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTG > 1:336034/1‑74 CACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACATGTCGGAGCGTTCTCGGGTGGCGAGGGTCCGCAAAGCGACCCCGGCATTCTTCAGGTCTCAGGATGAAACTGGTAATCCCCCAGGTTGCGACACCGCTCACCATTGATCCGC > 1:9551/1‑150 GGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCGGCATTCTTCAGGTCTCAGGATGAAACTGGTAATCCCCCAGGTTGCGACACCGCTCACC > 1:51217/1‑135 GGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCGGCATTCTTCAGGTCTCAGGATGAAACTGGTAATCCCCCAGGTTGCGACACCGCTCACC < 2:51217/135‑1 CACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATTGGCCGCAAAGCGGCCCCGGCATTCTTCAGTTCTCAGGATGAAACTGGTAATCCCCCCGGGTGCGAAACCGCTCACCATTGCTCCGCCGCAACTG > 2:40205/1‑150 CACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCGGCATTCTTCAGGTCTCAGGATGAAACTGGTAATCCCCCAGGTTGCGACACCGCTCACCATTGATCCGCCGCAACTG < 2:497282/150‑1 ATGGTTATCAAGTGGCCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/796680‑796843 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgcgacacaaggccACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCGGCATTCTTCAGGTCTCAGGATGAAACTGGTAATCCCCCAGGTTGCGACACCGCTCACCATTGATCCGCCGCAACTG < NC_002947/796881‑796733 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |