New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3919152 =	18 (0.960)	3 (0.170)	3/238	NT	16.9%	coding (2890/3129 nt)	mexB	multidrug resistance protein MexB
	?	NC_002947	3919185 =	12 (0.660)					coding (2923/3129 nt)	mexB	multidrug resistance protein MexB

CAGGGGCACCACGCCGAGGATGAACGCCAGCGACGTCATCACGATCGGCCGCAGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3919208‑3919152 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgTTCATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGC  >  NC_002947/3919185‑3919291                                                                                                                                                                      CAGGGGCACCACGCCGAGGATGAACGCCAGCGACGTCATCACGATCGGCCGCAGGCGTTCATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGC                                                       <  1:26417/111‑1 CAGGGGCACCACGCCGAGGATGAACGCCAGCGACGTCATCACGATCGGCCGCAGGCGTTCATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGC                                                       >  2:26417/1‑111               CGAGGATGAACGCCAGCGACGTCATCACGATCGGCCGCAGGCGTTCATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGC  >  1:98982/1‑150                                                                                                                                                                      CAGGGGCACCACGCCGAGGATGAACGCCAGCGACGTCATCACGATCGGCCGCAGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3919208‑3919152 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgTTCATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGC  >  NC_002947/3919185‑3919291

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.