| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3981803 = | 14 (0.750) | 3 (0.170) | 3/238 | NT | 17.9% | intergenic (‑58/+39) | cobW/PP_mr43 | adenosylcobalamin biosynthesis protein CobW/Cobalamin regulatory region |
| ? | NC_002947 | 3981841 = | 14 (0.770) | intergenic (‑96/+1) | cobW/PP_mr43 | adenosylcobalamin biosynthesis protein CobW/Cobalamin regulatory region | |||||
CTGCCTCGTCACGTTTTCGACTTTCAACCGGGCGGGGTGATCCGGTGGCGAACAAGCCCGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3981867‑3981803‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggTTGAAAGTCGAAAACGTGACGAGGCAGGTCTCCTGGCTTGCACCGTTCCATGTCCCCGTTCGGGCTGGCGGGATGACGCCTTCCCGCGCGTTGGCGCAGTGGCTGTGTCGA > NC_002947/3981841‑3981951 CTGCCTCGTCACGTTTTCGACTTTCAACCGGGCGGGGTGATCCGGTGGCGAACAAGCCCGGCCGGTTGAAAGTCGAAAACGTGACGAGGCAGGTCTCCTGGCTTGCACCGTTCCATGTCCCCGTTCGGGCTGGCGGGATGACGC < 1:368003/144‑1CTGCCTCGTCACGTTTTCGACTTTCAACCGGGCGGGGTGATCCGGTGGCGAACAAGCCCGGCCGGTTGAAAGTCGAAAACGTGACGAGGCAGGTCTCCTGGCTTGCACCGTTCCATGTCCCCGTTCGGGCTGGCGGGATGACGC > 2:368003/1‑144 ACCGGGCGGGGTGATCCGGTGGCGAACAAGCCCGGCCGGTTGAAAGTCGAAAACGTGACGAGGCAGGTCTCCTGGCTTGCACCGTTCCATGTCCCCGTTCGGGCTGGCGGGATGACGCCTTCCCGCGCGTTGGCGCAGTGGCTGTGTCGA > 1:232838/1‑150 CTGCCTCGTCACGTTTTCGACTTTCAACCGGGCGGGGTGATCCGGTGGCGAACAAGCCCGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3981867‑3981803‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggTTGAAAGTCGAAAACGTGACGAGGCAGGTCTCCTGGCTTGCACCGTTCCATGTCCCCGTTCGGGCTGGCGGGATGACGCCTTCCCGCGCGTTGGCGCAGTGGCTGTGTCGA > NC_002947/3981841‑3981951 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |