| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4896443 | 25 (1.330) | 11 (0.710) | 10/204 | NT | 35.1% | intergenic (+31/‑177) | PP_4304/sbp‑I | VIC family cation transporter/sulfate ABC transporter substrate‑binding protein |
| ? | NC_002947 | = 4896490 | 20 (1.290) | intergenic (+78/‑130) | PP_4304/sbp‑I | VIC family cation transporter/sulfate ABC transporter substrate‑binding protein | |||||
TCTTTACCGCCGAGCTGGCCAATGCCATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4896276‑4896443‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcctcttcgcgggtaaaCCCGCTCCTACGGGGGACCGCGCACGGTCCGCGCCTGTAGGAGCGGATTTACCCGCGAAGAGGCCGGCGCAGGCGCTATCACGCTTTGGGAAACAACCCATTCCCACAGCGAGAACAGAACGCCGCCCCCTGCTCGTGGGTC < NC_002947/4896490‑4896349 TCTTTACCGCCGAGCTGGCCAATGCCATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCC > 1:45730/1‑150 tCTGGCCAATGCCATGCGTGGGGAGCGGCTGCAGCATGATTGCACGACCTGCCACAAGAAGACCCACGCGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCGCAAAGCGTGATAGCGCCTGCGCCGACCTCGGCGCGG < 2:67073/149‑1 GCCAATGCCATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAA > 1:299051/1‑150 CACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCCGCTCCTACGGGGGACCGCGCACGGTCCGCGCCTGTAGGAGCGGA < 2:299051/150‑1 CCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAA < 1:223216/91‑1 CCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAA > 2:223216/1‑91 ACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGGACCGCGCACGGTCCGCGCCTGTAGGAGCGGATTTACCCGCGAA > 1:366562/1‑149 ACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGGACCGCGCACGGTCCGCGCCTGTAGGAGCGGATTTACCCGCGAA < 2:366562/149‑1 GGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGGACCGCGCACGGTCCGCGCCTGTAGGAGCGGATTTACCCGCGAAGAGGCCGGC > 2:452999/1‑150 TGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGGACCGCGCACGGTCCGCGCCTGTAGGAGCGGATTTACCCGCGAAGAGGCCGGCGCAGGCGCTATCACGCTTTGG < 1:452999/150‑1 TGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGGACCGCGCACGGTCCGCGCCTGTAGGAGCGGA < 1:408324/108‑1 TGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGGACCGCGCACGGTCCGCGCCTGTAGGAGCGGA > 2:408324/1‑108 GAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGGACCGCGCACGGTCCGCGCCTGTAGGAGCGGATTTACC > 2:124205/1‑109 GAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGGACCGCGCACGGTCCGCGCCTGTAGGAGCGGATTTACC < 1:124205/109‑1 GTGATAGCGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGGACCGCGCACGGTCCGCGCCTGTAGGAGCGGAT > 2:175848/1‑83 GTGATAGCGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGGACCGCGCACGGTCCGCGCCTGTAGGAGCGGAT < 1:175848/83‑1 CCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGGACCGCGCACGGTCCGCGCCTGTAGGAGCGGATTTACCCGCGAAGAGGCCGGCGCAGGCGCTATCACGCTTTGGGAAACAACCCATTCCCACAGCGAGAACAGAACGCCGCCCCC > 1:135693/1‑150 CGGGTAAACCCGCTCCTACGGGGGACCGCGCACGGTCCGCGCCTGTAGGAGCGGATTTACCCGCGAAGAGGCCGGCGCAGGCGCTATCACGCTTTGGGAAACAACCCATTCCCACAGCGAGAACAGAACGCCGCCCCCTGCTCGTGGGTC < 2:173499/150‑1 TCTTTACCGCCGAGCTGGCCAATGCCATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4896276‑4896443‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcctcttcgcgggtaaaCCCGCTCCTACGGGGGACCGCGCACGGTCCGCGCCTGTAGGAGCGGATTTACCCGCGAAGAGGCCGGCGCAGGCGCTATCACGCTTTGGGAAACAACCCATTCCCACAGCGAGAACAGAACGCCGCCCCCTGCTCGTGGGTC < NC_002947/4896490‑4896349 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |