New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2048837 =	16 (0.850)	4 (0.250)	4/212	NT	24.4%	intergenic (+33/+106)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
	?	NC_002947	2048928 =	11 (0.680)					intergenic (+124/+15)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein

TATGCCTACACCCATGTGGCGCAGCAGGGCGGGTTCGACCTGGCAGACTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAA  >  NC_002947/2048688‑2048957                                                                                                                                                      |                                                                                                                         tATGCCTACACCCATGTGGCGCAGCAGGGCGGGTTCGACCTGGCAGACTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATc                                                                                                                          <  2:21065/150‑1 (MQ=255)  ccaggccctgcaggaaggtggcggccgggtgtaagtgccatgcctgcgcattgaagaagccggcaaggtgacctggatgtatgagtccaaggcaatcatcgcttacctggatgagcggtttgccgccatctgactgacgctgcagatccc                                                                                                                         <  1:117074‑M1/2‑1 (MQ=255)      gccctgcaggaaggtggcggccgggtgaaagtgccatgcctgcgcattgaagaagccggcaaggtgacctggatgtatgagtccaaggcaatcatcgcttacctggatgagcggtttgccgccatctgactgacgctgcagatcCCTtgt                                                                                                                     <  1:459558‑M1/6‑1 (MQ=255)      gccctgcaggaaggtggcggccgggtgaaagtgccatgcctgcgcattgaagaagccggcaaggtgacctggatgtatgagtccaaggcaatcatcgcttacctggatgagcggtttgccgccatctgactgacgctgcagatcCCTtgt                                                                                                                     >  1:375827‑M1/145‑150 (MQ=255)        cctgcaggaaggtggcggccgggtgaaagtgccatgcctgcgcattgaagaagccggcaaggtgacctggatgtatgagtccaaggcaatcatcgcttacctggatgagcggtttgccgccatctgactgacgctgcagatcCCTTGTgg                                                                                                                   >  1:2485‑M1/143‑150 (MQ=255)              ggaaggtggcggccgggtgaaagtgccatgcctgcgcattgaagaagccggcaaggtgacctggatgtatgagtccaaggcaatcatcgcttacctggatgagcggtttgccgccatctgactgacgctgcagatcCCTTGTgg                                                                                                                   >  2:349015‑M1/137‑144 (MQ=255)              ggaaggtggcggccgggtgaaagtgccatgcctgcgcattgaagaagccggcaaggtgacctggatgtatgagtccaaggcaatcatcgcttacctggatgagcggtttgccgccatctgactgacgctgcagatcCCTTGTgg                                                                                                                   <  1:349015‑M1/8‑1 (MQ=255)               gaaggtggcggccgggtgaaagtgccatgcctgcgcattgaagaagccggcaaggtgacctggatgtatgagtccaaggcaatcatcgcttacctggatgagcggtttgccgccatctgactgacgctgcagatcCCTTGTGGGAGCggg                                                                                                            >  1:345462‑M1/136‑150 (MQ=255)                aaggtggcggccgggtgaaagtgccatgcctgcgcattgaagaagccggcaaggtgacctggatgtatgagtccaaggcaatcatcgcttacctggatgagcggtttgccgccatctgactgacgctgcagatcCCTTGTGGGAGCGGGc                                                                                                           >  1:319389‑M1/135‑150 (MQ=255)                 aggtggcggccgggtgaaagtgccatgcctgcgcattgaagaagccggcaaggtgacctggatgtatgagtccaaggcaatcatcgcttacctggatgagcggtttgccgccatctgactgacgctgcagatcCCTTGTGGGAGCGGGCg                                                                                                          <  2:446202‑M1/17‑1 (MQ=255)                                ggTTCGACCTGGCAGACTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACgg                                                                                           <  1:90227/150‑1 (MQ=255)                                 gTTCGACCTGGCAGACTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCg                                                                                                          <  2:422135/134‑1 (MQ=255)                                 gTTCGACCTGGCAGACTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCg                                                                                                          >  1:422135/1‑134 (MQ=255)                                     gACCTGGCAGACTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATTCTTGTGGGAGCGGGCGTGCCCGCGAACCCGGGCGCa                                                                                      >  1:3132/1‑150 (MQ=255)                                        cTGGCAGACTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGcc                                                                                   >  1:118641/1‑150 (MQ=255)                                              gACTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACAGGCGCAGCCCGTGcc                                                                             >  2:354483/1‑150 (MQ=255)                                                cTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCaa                                                                           <  2:118641/150‑1 (MQ=255)                                                                gCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGATCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGc                                                           >  2:321025/1‑150 (MQ=255)                                                                  ctggctggAGC‑GGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTtg                                                                                                                      >  1:354553/1‑88 (MQ=255)                                                                  ctggctggAGC‑GGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTtg                                                                                                                      <  2:354553/88‑1 (MQ=255)                                                                       tggAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGATCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCgg                                                    <  1:321025/150‑1 (MQ=255)                                                                                     agcCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTccc                                      >  1:121405/1‑150 (MQ=255)                                                                                        cACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCa                                                                                      <  2:271977/99‑1 (MQ=255)                                                                                        cACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCa                                                                                      >  1:271977/1‑99 (MQ=255)                                                                                                   tgtgCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCa                        <  2:121405/150‑1 (MQ=255)                                                                                                                    gcggtttgccgccatctgactgacgctgcagatcCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGc                                              <  1:402339‑M1/77‑1 (MQ=255)                                                                                                                    gcggtttgccgccatctgactgacgctgcagatcCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGc                                              >  2:402339‑M1/35‑111 (MQ=255)                                                                                                                         cctaCCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGCGAACGGGCGTGCCCGCGAACACGGGCGCAAGCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGAGAGTGCAGCGTCCCCCAGATGGCGGCaaa  >  2:117074/4‑150 (MQ=25)                                                                                                                            aCCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCt                                                             >  1:173854/1‑88 (MQ=255)                                                                                                                            aCCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCt                                                             <  2:173854/88‑1 (MQ=255)                                                                                                                                    tgactgacgctgcagatcCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGc                                                                                    >  2:278125‑M1/19‑57 (MQ=255)                                                                                                                                    tgactgacgctgcagatcCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGc                                                                                    <  1:278125‑M1/39‑1 (MQ=255)                                                                                                                                                      |                                                                                                                         TATGCCTACACCCATGTGGCGCAGCAGGGCGGGTTCGACCTGGCAGACTACCCGGCGGTAAGGGCCTGGCTGGAGCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAA  >  NC_002947/2048688‑2048957

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.