New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4167406 =	20 (1.060)	4 (0.230)	4/232	NT	16.0%	coding (114/1212 nt)	creA	creatinase
	?	NC_002947	4167447 =	23 (1.300)					coding (73/1212 nt)	creA	creatinase

AGGGTTGCCCGCCGTCGATATTGGCGCTGATCGAGACCACCTTGTCCTGGGTGATCACCAGCGCATAAGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGTT  >  NC_002947/4167258‑4167553                                                                                                                                                     |                                                                                                                                                    ctcgtcggttctgttgcaatgcttctcaggcggccggcctgaacagcgtgctcacaacgacaaggaaccccgaccatgcaaatgcccaagaccctgaaaatccgcaatggcgacaaggtgcagccaaccttttccgctcaggaatacgct                                                                                                                                                    <  2:359490‑M1/2‑1 (MQ=255)    gtcggttctgttgcaatgcttctcaggcggccggcctgaacagcgtgctcacaacgacaaggaaccccgaccatgcaaatgcccaagaccctgaaaatccgcaatggcgacaaggtgcagccaaccttttccgctcaggaatacgctgct                                                                                                                                                 <  1:427944‑M1/5‑1 (MQ=255)                 gATATTGGCGCTGATCGAGACCACCTTGTCCTGGGTGATCACCAGCGCACAACGTCGATCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGc                                                                                                                                    >  1:290999/1‑150 (MQ=255)                          gcTGATCGAGACCACCTTGTCCTGGGGGATCACCAGCGCATAAGGGCGGCCGAACGAGCAGTAAAGGACATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCg                                                                                                                           >  1:196998/1‑150 (MQ=255)                            aggcggccggcctgaacagcgtgctcacaacgacaaggaaccccgaccatgcaaatgcccaagaccctgaaaatccgcaatggcgacaaggtgcagccaaccttttccgctcaggaatacgCTGCTCGGCCATATAGGCCCGCAGCCggg                                                                                                                         <  1:135225‑M1/29‑1 (MQ=255)                                   cggcctgaacagcgtgctcacaacgacaaggaaccccgaccatgcaaatgcccaagaccctgaaaatccgcaatggcgacaaggtgcagccaaccttttccgctcaggaatacgc                                                                                                                                                     <  1:289717‑M1/1‑1 (MQ=255)                                   cggcctgaacagcgtgctcacaacgacaaggaaccccgaccatgcaaatgcccaagaccctgaaaatccgcaatggcgacaaggtgcagccaaccttttccgctcaggaatacgc                                                                                                                                                     >  2:289717‑M1/115‑115 (MQ=255)                                         gaacagcgtgctcacaacgacaaggaaccccgaccatgcaaatgcccaagaccctgaaaatccgcaatggcgacaaggtgcagccaaccttttccgctcaggaatacgCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGagcagc                                                                                                            >  2:135225‑M1/109‑150 (MQ=255)                                                   gTGATCACCAGCGCATAAGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGa                                                                                                  >  2:494226/1‑150 (MQ=255)                                                      acaacgacaaggaaccccgaccatgcaaatgcccaagaccctgaaaatccgcaatggcgacaaggtgcagccaaccttttccgctcaggaatacgCTGCTc                                                                                                                                                >  2:129676‑M1/96‑101 (MQ=255)                                                      acaacgacaaggaaccccgaccatgcaaatgcccaagaccctgaaaatccgcaatggcgacaaggtgcagccaaccttttccgctcaggaatacgCTGCTc                                                                                                                                                <  1:129676‑M1/6‑1 (MQ=255)                                                           cAGCGCATAAGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGaaaa                                                                                          >  2:279740/1‑150 (MQ=255)                                                                 gaaccccgaccatgcaaatgcccaagaccctgaaaatccgcaatggcgacaaggtgcagccaaccttttccgctcaggaatacgCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCATGAGCGGAAAAGGTTgg                                                                                    <  1:253132‑M1/66‑1 (MQ=255)                                                                  aaccccgaccatgcaaatgcccaagaccctgaaaatccgcaatggcgacaaggtgcagccaaccttttccgctcaggaatacgCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGc                                                                                   >  2:253132‑M1/84‑150 (MQ=255)                                                                             gAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTc                                                                        >  2:75221/1‑150 (MQ=255)                                                                                 gAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCa                                                                    >  1:359490/1‑150 (MQ=255)                                                                                    cAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTg                                                                 <  2:75634/150‑1 (MQ=255)                                                                                       tAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCAc                                                                              >  2:370542/1‑134 (MQ=255)                                                                                       tAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCAc                                                                              <  1:370542/134‑1 (MQ=255)                                                                                       tAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCgg                                                              >  2:427944/1‑150 (MQ=255)                                                                                               aTCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAg                                                      <  2:196998/150‑1 (MQ=255)                                                                                                                        tACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCggg                             <  1:494226/150‑1 (MQ=255)                                                                                                                        tACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCggg                             >  1:477246/1‑150 (MQ=255)                                                                                                                        tACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCggg                             <  1:279740/150‑1 (MQ=255)                                                                                                                              gTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCt                       >  2:129297/1‑150 (MQ=255)                                                                                                                               tGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGG‑AAAGGTTGGCTg                                                                                 >  2:328683/1‑90 (MQ=255)                                                                                                                               tGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGG‑AAAGGTTGGCTg                                                                                 <  1:328683/90‑1 (MQ=255)                                                                                                                                gAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCAt                                    >  1:400277/1‑135 (MQ=255)                                                                                                                                gAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCAt                                    <  2:400277/135‑1 (MQ=255)                                                                                                                                         cgccTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGa            <  1:372254/150‑1 (MQ=255)                                                                                                                                                   tCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGtt  <  1:75221/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    AGGGTTGCCCGCCGTCGATATTGGCGCTGATCGAGACCACCTTGTCCTGGGTGATCACCAGCGCATAAGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGTT  >  NC_002947/4167258‑4167553

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.