New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1967188 = | 9 (0.480) | 8 (0.580) | 6/180 | NT | 54.1% | intergenic (+15/+104) | PP_1762/yciK | hypothetical protein/putative oxidoreductase |
? | NC_002947 | 1967284 = | 7 (0.510) | intergenic (+111/+8) | PP_1762/yciK | hypothetical protein/putative oxidoreductase |
TGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTGGGCCCGCATCGCCGT > NC_002947/1967164‑1967429 | tGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGc > 2:306687/1‑150 (MQ=255) ccGACCTCTTCGCGGGCTTGCCCGCCTCCTCACGAACACCGCCACGCTAAAGGATTGGTCCCTTCCTGTTGGCGGGGGCCAGCGCGCCAAACGGCCGGGCCGGGGGTATCGGGCGTGGACGGCCTGCCCGTTGACCgctgtgctgttggg > 2:247764/1‑146 (MQ=255) GCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTACTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGccc < 1:363179‑M1/150‑1 (MQ=255) CTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCa < 1:37304‑M1/150‑1 (MQ=255) cgctcccacaggcagggcgcaatccttgagggttgcggtgatcctgtgggagcgggcaagcccgcgaagaggccgGTGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCt < 2:450466‑M2/42‑1 (MQ=255) cgctcccacaggcagggcgcaatccttgagggttgcggtgatcctgtgggagcgggcaagcccgcgaagaggccgGTGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCt > 1:450466‑M2/76‑117 (MQ=255) gctcccacaggcagggcgcaatccttgagggttgcggtgatcctgtgggagcgggcaagcccgcgaagaggccgATGCAGGt > 1:384563‑M2/75‑82 (MQ=255) gctcccacaggcagggcgcaatccttgagggttgcggtgatcctgtgggagcgggcaagcccgcgaagaggccgATGCAGGt < 2:384563‑M2/8‑1 (MQ=255) gctcccacaggcagggcgcaatccttgagggttgcggtgatcctgtgggagcgggcaagcccgcgaagaggccgATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCt < 1:313295‑M2/42‑1 (MQ=255) gctcccacaggcagggcgcaatccttgagggttgcggtgatcctgtgggagcgggcaagcccgcgaagaggccgATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCt > 2:313295‑M2/75‑116 (MQ=255) gCTCCCACAGGGTCACCGCAAACCCCAAAGATTGCGCCCTTCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGGCGGTGCAGGGTTATTTGGCGTTGAACGCCTGCCCGTTTACCCCTGTGCTGTCCGGCCCCCTCAGGTACACGTACAccc > 2:166417/1‑149 (MQ=255) CTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCgg > 1:306687‑M1/1‑150 (MQ=255) tcccacaggcagggcgcaatccttgagggttgcggtgatcctgtgggagcgggcaagcccgcgaagaggccgATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGc > 2:404013‑M2/73‑150 (MQ=255) CCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGc < 1:249157‑M1/124‑1 (MQ=255) CCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGc > 2:249157‑M1/1‑124 (MQ=255) CACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATg < 1:237772‑M1/150‑1 (MQ=255) ACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAgg < 2:169553‑M1/75‑1 (MQ=255) ACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAgg > 1:169553‑M1/1‑75 (MQ=255) tCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGaa < 1:479808/85‑1 (MQ=255) tCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGaa > 2:479808/1‑85 (MQ=255) gggcgcaatccttgagggttgcggtgatcctgtgggagcgggcaagcccgcgaagaggccgATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTc < 1:404013‑M2/89‑1 (MQ=255) gcgcCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCg > 2:441106/1‑150 (MQ=255) gcCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCGCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCggg > 1:353806/1‑150 (MQ=255) ctgcctgTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTtc > 2:385963/1‑150 (MQ=255) gcctgTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTtctc < 2:37304/150‑1 (MQ=255) gcctgTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTtctc > 2:444994/1‑150 (MQ=255) cctcttcgcgggcttgcccgcgaagaggccgATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGcc > 2:330976‑M2/32‑150 (MQ=255) ttcgcgggcttgcccgcgaagaggccgATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCgggg < 1:330976‑M2/123‑1 (MQ=255) gcccgcgaagaggccgATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTGGGc < 2:353806‑M2/134‑1 (MQ=255) cgaagaggccgATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGCCCCCATCAGTTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTGGGCCCGCa < 2:476751‑M2/139‑1 (MQ=255) gccgATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTGGGCCCGCATCGCCGt > 1:470705‑M2/5‑150 (MQ=255) | TGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTGGGCCCGCATCGCCGT > NC_002947/1967164‑1967429 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |