| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2050911 = | 19 (1.010) | 4 (0.230) | 4/230 | NT | 20.1% | coding (135/321 nt) | PP_1825 | hypothetical protein |
| ? | NC_002947 | 2050951 = | 14 (0.800) | coding (95/321 nt) | PP_1825 | hypothetical protein | |||||
ACGCCCAGCCACAGCAGCAACAAGCCAGCCACGGTGAGGATGCTGGACAACGGTTTGTTGGCGTTGAGTTCCTGCAGGGCAGGGTAGTTGCCTAGCAGCCCGGCGACGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGAAACTGCCTTTAAGCTTCATTCCGCTCTCCTCGGTGGATATCCGGAATTCGACCTGCTGCTGC > NC_002947/2050810‑2051088 | acgcCCAGCCACAGCAGCAACAAGCCAGCCACGGTGAGGATGCTGGACAACGGTTTGTTGGCGTTGAGTTCCTGCAGGGCAGGGTAGTTGCCTAGCAGCCCGGCGACGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGcc < 1:154371/150‑1 (MQ=255) ctgcgcccgcgcgaaccgcgtaactggggcgcccgcctggcggccggcctgtcggccctgctGGCGACGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCcag > 2:288400‑M1/63‑104 (MQ=255) ctgcgcccgcgcgaaccgcgtaactggggcgcccgcctggcggccggcctgtcggccctgctGGCGACGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCcag < 1:288400‑M1/42‑1 (MQ=255) cAACGGTTTGTTGGCGTTGAGTTCCTGCAGGGCAGGGTAGTTGCCTAGCAGCCCGGCGACGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCgg < 2:210318/150‑1 (MQ=255) ttCCTGCAGGGCAGGGTAGTTGCCTAGCAGCCCGGCGACGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGaa > 1:35936/1‑150 (MQ=255) tCCTGCAGGGCAGGGTAGTTGCCTAGCAGCCCGGCGACGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGaaa < 1:230365/150‑1 (MQ=255) tGCAGGGCAGGGTAGTTGCCTAGCAGCCCGGCGACGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGa > 2:87675/1‑145 (MQ=255) tGCAGGGCAGGGTAGTTGCCTAGCAGCCCGGCGACGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGa < 1:87675/145‑1 (MQ=255) ggcagggTAGTTGCCTAGCAGCCCGGCGACGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGAAACTGCCttt > 2:324846/1‑150 (MQ=255) agggTAGTTGCCTAGCAGCCCGGCGACGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGAAACTGCCTTTAAg < 2:115007/150‑1 (MQ=255) ttGCCTAGCAGCCCGGCGACGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAggc > 2:53351/1‑70 (MQ=255) ttGCCTAGCAGCCCGGCGACGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAggc < 1:53351/70‑1 (MQ=255) ctggcgacgctgggcgtattgctggccatggccggcgtcgccAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAg < 1:288400‑M2/62‑1 (MQ=255) ctggcgacgctgggcgtattgctggccatggccggcgtcgccAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAg > 2:288400‑M2/43‑104 (MQ=255) GGCGACGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGAAACTGCCTTTAAGCTTCATTCCGCTCTCCTCGGt > 2:35936‑M1/1‑150 (MQ=255) GCGACGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGAAACTGCCTTTAAGCTTCATTCCGCTCTCCTCGGTg > 2:502272‑M1/1‑150 (MQ=255) GACGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGAAACTGCCTTTAAGCTTCATTCCGCTCTCCTCGGTGGa < 2:508422‑M1/150‑1 (MQ=255) ACGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGAAACTGCCTTTAAGCTTCATTCCGCTCTCCTCGGTGGat < 1:375467‑M1/150‑1 (MQ=255) CCGGCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGAAACTGCCTTTAAGCTTCATTCCGCTCTCCTCGGTGGATATc < 2:234937‑M1/150‑1 (MQ=255) tgggcgtattgctggccatggccggcgtcgccAGCAGGGCCGACAggccgg < 1:32113‑M2/19‑1 (MQ=255) tgggcgtattgctggccatggccggcgtcgccAGCAGGGCCGACAggccgg > 2:32113‑M2/33‑51 (MQ=255) ggCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGAAACTGCCTTTAAGCTTCATTCCGCTCTCCTCGGTGGATATCCg < 1:459305/150‑1 (MQ=255) gCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGAAACTGCCTTTAAGCTTCATTCCGCTCTCCTCGGTGGATATCCGGAATTCg > 1:145156/1‑150 (MQ=255) cAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGAAACTGCCTTTAACGGTCATTCCGCTCTCCTCGGTGGATATCCGGAATTCGAc > 1:487784/1‑150 (MQ=255) tACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGAAACTGCCTTTAAGCTTCATTCCGCTCTCCTCGGTGGATATCCGGAATTCGACctgctg > 1:193013/1‑150 (MQ=255) cccAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGAAACTGCCTTTAAGCTTCATTCCGCTCTCCTCGGTGGATATCCGGAATTCGACCtgctgctgc < 1:234937/150‑1 (MQ=255) ccAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGAAACTGCCTTTaa > 2:450764/1‑99 (MQ=255) ccAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGAAACTGCCTTTaa < 1:450764/99‑1 (MQ=255) | ACGCCCAGCCACAGCAGCAACAAGCCAGCCACGGTGAGGATGCTGGACAACGGTTTGTTGGCGTTGAGTTCCTGCAGGGCAGGGTAGTTGCCTAGCAGCCCGGCGACGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGAAACTGCCTTTAAGCTTCATTCCGCTCTCCTCGGTGGATATCCGGAATTCGACCTGCTGCTGC > NC_002947/2050810‑2051088 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |