| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4803082 | 45 (1.510) | 6 (0.210) | 6/266 | 2.6 | 12.8% | coding (277/972 nt) | PP_4231 | xanthine dehydrogenase accessory factor |
| ? | NC_002947 | = 4803104 | 39 (1.370) | coding (255/972 nt) | PP_4231 | xanthine dehydrogenase accessory factor | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GAGCAGCTGGCGGGTACCCGTAGGCAGGCTCACCTCACGCAGTACCCGGCGCTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4802930‑4803082‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggcagCGACCCGCGTTCGCGCGTTCGCCTGCCGTGTGGCGGTGTGCTGGAAGTGCTGGTGGAGAACCTGCCGGTTGAATGTGAGGTGCAGGCGCATCTGCGTGAGTTGGAACGTGCGCTGCTGGGCCAGCGCCGGGTACTGCGTGAGGTGA < NC_002947/4803104‑4802959 GAGCAGCTGGCGGGTACCCGTAGGCAGGCTCACCTCACGCAGTACCCGGCGCTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGG < 1:393760/150‑1 CAGCTGGCGGGTACCCGTAGGCAGGCTCACCTCACGCAGTACCCGGCGCTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAG < 1:267377/150‑1 GCTCACCTCACGCAGTACCCGGCGCTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGCGACCCGCGTTCGCGCGTTCGCCT < 1:213557/150‑1 CTCACCTCACGCAGTACCCGGCGCTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGCGACCCGCGTTCGCGCGTTCGCCTG < 1:630289/150‑1 CCGGCGCTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGG > 1:473514/1‑105 CCGGCGCTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGG < 2:473514/105‑1 GCACGTTACAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGCGACCCGCGTTCGCGCGTTCGCCTGCCGTGT > 1:406170/1‑120 GCACGTTACAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGCGACCCGCGTTCGCGCGTTCGCCTGCCGTGT < 2:406170/120‑1 CTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGCGACCCGCGTTCGCGCGTTCGCCTGCCGT < 1:322247/86‑1 CTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGCGACCCGCGTTCGCGCGTTCGCCTGCCGT > 2:322247/1‑86 ACGGCAGCGACCCGCGTTCGCGCGTTCGCCTGCCGTGTGGCGGTGTGCTGGAAGTGCTGGTGGAGAACCTGCCGGTTGAATGTGAGGTGCAGGCGCATCTGCGTGAGTTGGAACGTGCGCTGCTGGGCCAGCGCCGGGTACTGCGTGAGG < 1:300310/150‑1 CGGCAGCGACCCGCGTTCGCGCGTTCGCCTGCTGTGTGGCGGTGTGCTGGAAGTGCTGGTGGAGAACCTGCCGGTTGAATGTGAGGTGCAGGCGCATCTGCGTGAGTTGGAACGTGCGCTGCTGGGCCAGCGCCGGGTACTGCGTGAGGT < 1:426160/150‑1 GGCAGCGACCCGCGTTCGCGCGTTCGCCTGCCGTGTGGCGGGGTGCTGGAAGTGCTGGTGGAGAACCTGCCGGTTGAATGTGAGGTGCAGGCGCATCTGCGTGAGTTGGAACGTGCGCTGCTGGGCCAGCGCCGGGTACTGCGTGAGGTG > 2:249472/1‑150 GCAGCGACCCGCGTTCGCGCGTTCGCCTGCCGTGTGGCGGTGTGCTGGAAGTGCTGGTGGAGAACCTGCCGGTTGAATGTGAGGTGCAGGCGCATCTGCGTGAGTTGGAACGTGCGCTGCTGGGCCAGCGCCGGGTACTGCGTGAGGTGA < 2:102350/150‑1 GAGCAGCTGGCGGGTACCCGTAGGCAGGCTCACCTCACGCAGTACCCGGCGCTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4802930‑4803082‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggcagCGACCCGCGTTCGCGCGTTCGCCTGCCGTGTGGCGGTGTGCTGGAAGTGCTGGTGGAGAACCTGCCGGTTGAATGTGAGGTGCAGGCGCATCTGCGTGAGTTGGAACGTGCGCTGCTGGGCCAGCGCCGGGTACTGCGTGAGGTGA < NC_002947/4803104‑4802959 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |