New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5386730 =	39 (1.300)	6 (0.210)	6/264	2.6	14.3%	coding (192/2811 nt)	dld2	D‑lactate dehydrogenase
	?	NC_002947	5386761 =	35 (1.240)					coding (223/2811 nt)	dld2	D‑lactate dehydrogenase
Rejected: Frequency below/above cutoff threshold.

CTCCACCCTGGCCTTCGGCACCGACGCCAGCTTCTACCGCTTGATCCCCAAGCTGGTGGTGCGCGTCGAGTCCGAGGACGAAGTGGTCGGCCTGATCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAATTCGTCGCCAGGGCGAGCAGATTCGCCTGCAACCCGGCGTGATCGGCGCCCAGGCCAACGCCTGGCTGGCCCCCTTC  >  NC_002947/5386613‑5386907                                                                                                                                                     |                                                                                                                                                   cTCCACCCTGGCCTTCGGCACCGACGCCAGCTTCTACCGCTTGATCCCCAAGCTGGTGGTGCGCGTCGAGTCCGAGGACGAAGTGGTCGGCCTGATCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAg                                                                                                                                                   >  1:223245/1‑150 (MQ=255)  tCCACCCTGGCCTTCGGCACCGACGCCATCTTCTACCGCTTGATCCCCAAGCTGGTGGTGCGCGTCGAGTCCGAGGACGAAGTGGTCGGCCTGATCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGc                                                                                                                                                  >  1:97286/1‑150 (MQ=255)  tCCACCCTGGCCTTCGGCACCGACGCCAGCTTCTACCGCTTGATCCCCAAGCTGGTGGTGCGCGTCGAGTCCGAGGACGAAGTGGTCGGCCTGATCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGc                                                                                                                                                  <  2:36954/150‑1 (MQ=255)    cACCCTGGCCTTCGGCACCGACGCCAGCTTCTACCGCTTGATCCCCAAGCTGGTGGTGCGCGTCGAGTCCGAGGACGAAGTGGTCGGCCTGATCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCt                                                                                                                                                <  1:593154/150‑1 (MQ=255)    cACCCTGGCCTTCGGCACCGACGCCAGCTTCTACCGCTTGATCCCCAAGCTGGTGGTGCGCGTCGAGTCCGAGGACGAAGTGGTCGGCCTGATCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCt                                                                                                                                                <  2:614699/150‑1 (MQ=255)    cACCCTGGCCTTCGGCACCGACGCCAGCTTCTACCGCTTGATCCCCAAGCTGGTGGTGCGCGTCGAGTCCGAGGACGAAGTGGTCGGCCTGATCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCt                                                                                                                                                <  2:526160/150‑1 (MQ=255)       ccTGGCCTTCGGCACCGACGCCAGCTTCTACCGCTTGATCCCCAAGCTGGTGGTGCGCGTCGAGTCCGAGGACGAAGTGGTCGGCCTGATCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTc                                                                                                                                             >  2:191053/1‑150 (MQ=255)       cacgccgggttgcaggcgaatctgctcgccctggcgacgaatttcgcggccgttccagttatcgccgagcacgatcagcaccgagtcgctgatggcctggccagacaggctGGTGCCGGTCACCTTCCGCGCTGCCGGCACCa                                                                                                                                                    >  2:308759‑M1/112‑143 (MQ=255)       cacgccgggttgcaggcgaatctgctcgccctggcgacgaatttcgcggccgttccagttatcgccgagcacgatcagcaccgagtcgctgatggcctggccagacaggctGGTGCCGGTCACCTTCCGCGCTGCCGGCACCa                                                                                                                                                    <  1:308759‑M1/32‑1 (MQ=255)         tGGCCTTCGGCACCGACGCCAGCTTCTACCGCTTGAGCCCCAAGCTGGTGGTGCGCGTCGAGTCCGAGGACGAAGTGGTCGGCCTGATCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGAACCAGACTGTCTg                                                                                                                                           >  2:55877/1‑150 (MQ=255)                    aggcgaatctgctcgccctggcgacgaatttcgcggccgttccagttatcgccgagcacgatcagcaccgagtcgctgatggcctggccagacaggctGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCt                                                                                                                                            >  1:391376‑M1/99‑138 (MQ=255)                    aggcgaatctgctcgccctggcgacgaatttcgcggccgttccagttatcgccgagcacgatcagcaccgagtcgctgatggcctggccagacaggctGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCt                                                                                                                                            <  2:391376‑M1/40‑1 (MQ=255)                            cAGCTTCTACCGCTTGATCCCCAAGCTGGTGGTGCGCGTCGAGTCCGAGGACGAAGTGGTCGGCCTGATCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGt                                                                                                                                              <  1:85095/128‑1 (MQ=255)                            cAGCTTCTACCGCTTGATCCCCAAGCTGGTGGTGCGCGTCGAGTCCGAGGACGAAGTGGTCGGCCTGATCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGt                                                                                                                                              >  2:85095/1‑128 (MQ=255)                                               cccAAGCTGGTGGTGCGCGTCGAGTCCGAGGACGAAGTGGTCGGCCTGATCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGc                                                                                                     >  1:14748/1‑150 (MQ=255)                                                ccAAGCTGGTGGTGCGCGTCGAGTCCGAGGACGAAGTGGTCGGCCTGATCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCg                                                                                                    >  2:407184/1‑150 (MQ=255)                                                ccAAGCTGGTGGTGCGCGTCGAGTCCGAGGACGAAGTGGTCGGCCTGATCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCg                                                                                                    >  1:631713/1‑150 (MQ=255)                                                           gtgCGCGTCGAGTCCGAGGACGAAGTGCTCTGCCTGATCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAAc                                                                                         >  1:483702/1‑150 (MQ=255)                                                               gcgTCGAGTCCGAGGACGAAGTGGTCGGCCTGATCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGcc                                                                                     <  1:191053/150‑1 (MQ=255)                                                               gcgTCCAGTCCTAGGACGAAGTGGTCGGCCTGATCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGcc                                                                                     <  2:347715/150‑1 (MQ=255)                                                                     ggTCCGAGGACGAAGTGGTCGGCCTGATCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGaaa                                                                               <  2:483702/149‑1 (MQ=255)                                                                       tCCGAGGACGAAGTGGTCGGCCTGATCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACAAGCCTGTCTGGCCAGGCCATCAGCGATGCGGTGCGGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAAtt                                                                             >  2:333948/1‑150 (MQ=255)                                                                                   gTGGTCGGCCTGATCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAATTCGTCGCCAGGGc                                                                 <  1:407184/150‑1 (MQ=255)                                                                                   gTGGTCGGCCTGATCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAATTCGTCGCCAGGGc                                                                 >  1:23095/1‑150 (MQ=255)                                                                                           ccTGATCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAATTCGTCGCCAGGGCGAGCAGAt                                                         >  2:197774/1‑150 (MQ=255)                                                                                            cTGATCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAATTCGTCGCCAGGGCGAGCAGAtt                                                        >  1:700508/1‑150 (MQ=255)                                                                                               aTCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAATTAGTCGCCAGGGCGAGCAGATTCGc                                                     >  2:342632/1‑150 (MQ=255)                                                                                                   aaCTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAATTCGTCGCCAGGGCGAGCAGATTCGCCTGc                                                 >  1:136139/1‑150 (MQ=255)                                                                                                    aCTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGCGCTCGGCGATAACTGGAACGGCCGCGAAATTCGTCGCCAGGGCGAGCAGATTCGCCTGCa                                                >  2:98816/1‑150 (MQ=255)                                                                                                       ggCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAATTCGTCGCCAGGGCGAGCAGATGCGCCTGCAAcc                                             <  2:631713/150‑1 (MQ=255)                                                                                                        gCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAATTCGTCGCCAGGGCGAGCAGATTCGCCTGCAAccc                                            >  1:107373/1‑150 (MQ=255)                                                                                                        gCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAATTCGTCGCCAGGGCGAGCAGATTCGCCTGCAAccc                                            >  1:445070/1‑150 (MQ=255)                                                                                                             agacaggctggtgccggcagcgcggaaggtgaccggcaccAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAATTCGTCGCCAGGGCGAGCAGATTCGCCt                                                   >  1:391376‑M2/41‑138 (MQ=255)                                                                                                             agacaggctggtgccggcagcgcggaaggtgaccggcaccAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAATTCGTCGCCAGGGCGAGCAGATTCGCCt                                                   <  2:391376‑M2/98‑1 (MQ=255)                                                                                                                cgAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAATTCGTCGCCAGGGCGAGCAGATTCGCCTGCAACCCGGCGTGAt                                    <  1:333948/150‑1 (MQ=255)                                                                                                                 gAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAATTCGTCGCCAGGGCGAGCAGATTCGCCTGTAACCCGGCGTGATc                                   <  1:197774/150‑1 (MQ=255)                                                                                                                  aGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACGCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAATTCGTCGCCAGGGCGAGCAGATTCGCCTGCAACCCGGCGTGATCg                                  <  2:97286/150‑1 (MQ=255)                                                                                                                     tggtgccggcagcgcggaaggtgaccggcaccAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAATTCGTCGCCAGGGCGAGCAGATTCGCCTGCAACCCGGCGTg                                      <  1:308759‑M2/111‑1 (MQ=255)                                                                                                                     tggtgccggcagcgcggaaggtgaccggcaccAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAATTCGTCGCCAGGGCGAGCAGATTCGCCTGCAACCCGGCGTg                                      >  2:308759‑M2/33‑143 (MQ=255)                                                                                                                     gggTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAATTCGTCGCCAGGGCGAGCAGATTCGCCTGCAACCCGGCGTGATCGgcg                               >  2:687896/1‑150 (MQ=255)                                                                                                                       gtgccggcagcgcggaaggtgaccggcaccAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGaa                                                                                          <  1:75614‑M2/59‑1 (MQ=255)                                                                                                                       gtgccggcagcgcggaaggtgaccggcaccAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGaa                                                                                          >  2:75614‑M2/31‑89 (MQ=255)                                                                                                                                  cTTCCGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAATTCGTCGCCAGGGCGAGCAGATTCGCCTGCAACCCGGCGTGATCGGCGCCCAGGCCAACGc                  >  1:587345/1‑150 (MQ=255)                                                                                                                                     ccGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAATTCGTCGCCAGGGCGAGCAGATTCGCCTGCAACCCGGCGTGATCGGCGCCCAGGCCAACGCctg               <  2:445070/150‑1 (MQ=255)                                                                                                                                        cgcTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTTGAACGGCCGCGAAATTCGTCGCCAGGGCGAGCAGATTCGCCTGCAACCCGGCGTGATCGGCGCCCAGGCCAACGCctggct            <  1:55877/150‑1 (MQ=255)                                                                                                                                            gcctgcaccAGTCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAATTCGTCGCCAGGGCGAGCAGATTCGCCTGCAACCCGGCGTGATCGGCGCCCAGGCCAACGCCTGGCTGGcc        <  1:278960‑M2/141‑1 (MQ=255)                                                                                                                                                  accAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAATTCGTCGCCAGGGCGAGCAGATTCGCCTGCAACCCGGCGTGATCGGCGCCCAGGCCAACGCCTGGCTGGCCCCCTTc  >  1:396592‑M2/4‑150 (MQ=255)                                                                                                                                                  accAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAATTCGTCGCCAGGGCGAGCAGATTCGCCTGCAACCCGGCGTGATCGGCGCCCAGGCCAACGCCTGGCTGGCCCCCTTc  >  1:463171‑M2/4‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                   CTCCACCCTGGCCTTCGGCACCGACGCCAGCTTCTACCGCTTGATCCCCAAGCTGGTGGTGCGCGTCGAGTCCGAGGACGAAGTGGTCGGCCTGATCAAACTGGCCCAGCGCGAGCGGGTGCCGGTCACCTTCCGCGCTGCCGGCACCAGCCTGTCTGGCCAGGCCATCAGCGACTCGGTGCTGATCGTGCTCGGCGATAACTGGAACGGCCGCGAAATTCGTCGCCAGGGCGAGCAGATTCGCCTGCAACCCGGCGTGATCGGCGCCCAGGCCAACGCCTGGCTGGCCCCCTTC  >  NC_002947/5386613‑5386907

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.