New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 5653009104 (1.170)27 (0.360) 19/220 4.4 23.4% intergenic (‑59/+102) PP_4961/PP_4962 lipoprotein/hypothetical protein
?NC_002947 = 5653023 89 (1.190)intergenic (‑73/+88) PP_4961/PP_4962 lipoprotein/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 106 total aligned reads displayed.

TCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTT  >  NC_002947/5652860‑5653155
                                                                                                                                                     |                                                                                                                                                   
tCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGCTTCTATTAGTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCCCAg                                                                                                                                                     <  1:1201088/150‑1 (MQ=255)
gccAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAg                                                                                                                                                     >  2:570604/2‑150 (MQ=255)
 ccAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAgg                                                                                                                                                    >  2:929958/1‑150 (MQ=255)
 ccAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAgg                                                                                                                                                    <  2:629221/150‑1 (MQ=255)
  cAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGt                                                                                                                                                   >  1:146524/1‑150 (MQ=255)
        tCTGCCGGGGCCGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTg                                                                                                                                             <  1:1558545/150‑1 (MQ=255)
          tGCCGGGGCCGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCa                                                                                                                                           <  1:1106638/150‑1 (MQ=255)
          tGCCGGGGCCGGTTGAGCCGGCTGCAGCAGCGAGCTTCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTCCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCa                                                                                                                                           <  2:242231/150‑1 (MQ=255)
            ccGGGGCCGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAgg                                                                                                                                         >  1:1586371/1‑149 (MQ=255)
            ccGGGGCCGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGt                                                                                                                                         >  2:1111763/1‑150 (MQ=255)
            ccGGGGCCGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGt                                                                                                                                         <  1:1002352/150‑1 (MQ=255)
               gggCCGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGtctc                                                                                                                                      >  2:133404/1‑150 (MQ=255)
                 gCCGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCtg                                                                                                                                    >  2:1156147/1‑150 (MQ=255)
                  ccGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCtgt                                                                                                                                   <  1:1717434/150‑1 (MQ=255)
                  ccGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCtgt                                                                                                                                   <  1:699280/150‑1 (MQ=255)
                    ggTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTgg                                                                                                                                 <  1:547238/150‑1 (MQ=255)
                    ggTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTgg                                                                                                                                 <  1:1066562/150‑1 (MQ=255)
                      ttGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑Ga                                                                                                                              <  1:486862/150‑1 (MQ=255)
                          gcCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGt                                                                                                                                              >  1:290008/1‑131 (MQ=255)
                            cGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGc                                                                                                                        <  1:755143/150‑1 (MQ=255)
                              gCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCgg                                                                                                                      >  1:1266121/1‑149 (MQ=255)
                                       gTGAGCATCCTGCCAGTGTCGCCAGGGCCTTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGaa                                                                                                             >  1:407020/1‑150 (MQ=255)
                                       gTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGaa                                                                                                             <  2:585451/150‑1 (MQ=255)
                                        tGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAg                                                                                                            <  2:1255872/150‑1 (MQ=255)
                                          aGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAggg                                                                                                          <  2:1074518/150‑1 (MQ=255)
                                           gCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGc                                                                                                         >  1:56430/1‑150 (MQ=255)
                                                cTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGt                                                                                                                                              >  2:415056/1‑109 (MQ=255)
                                                cTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGt                                                                                                                                              <  1:415056/109‑1 (MQ=255)
                                                cTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGcac                                                                                                    <  2:2230813/150‑1 (MQ=255)
                                                 tGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGcaca                                                                                                   >  2:1257473/1‑150 (MQ=255)
                                                 tGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGcaca                                                                                                   >  1:1313016/1‑150 (MQ=255)
                                                  gCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAg                                                                                                  >  1:2146094/1‑150 (MQ=255)
                                                    cAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCGGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCg                                                                                                >  1:608670/1‑150 (MQ=255)
                                                    cAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGc                                                                                                                        <  1:1641750/126‑1 (MQ=255)
                                                    cAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGc                                                                                                                        >  2:1641750/1‑126 (MQ=255)
                                                      gtgtCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGc                                                                                              >  1:86935/1‑150 (MQ=255)
                                                        gtCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGccc                                                                                            <  1:1156147/150‑1 (MQ=255)
                                                            ccAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCa                                                                                                                                           <  1:1081648/100‑1 (MQ=255)
                                                            ccAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCa                                                                                                                                           >  2:1081648/1‑100 (MQ=255)
                                                               gggCCGTCACGGCCAAAAGCGCCTTTTCTCAGTTGCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTCG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCttcttc                                                                                     <  2:532386/150‑1 (MQ=38)
                                                                  ccGTGACGGCCAAAAGCGCTTTCATTCAGTTACCTAGATCTGGGGCTGCTGTGCAGCCCTTCTCGGGCCCGCCCGCTCCCACAGGTACAGCGCAGTCT‑TGTGGTGAGCGGGGTACCTCACGACGGCCCGCACAGCGGCCCCTTGTTCaaa                                                                                  >  2:256638/1‑149 (MQ=21)
                                                                  ccGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAg                                                                                  <  1:1111763/150‑1 (MQ=255)
                                                                     tCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGAcc                                                                               >  2:2020857/1‑150 (MQ=255)
                                                                      cACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACca                                                                              <  1:2020857/150‑1 (MQ=255)
                                                                       aCGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACcac                                                                             >  2:194451/1‑150 (MQ=255)
                                                                          gCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACaaa                                                                          <  1:929958/150‑1 (MQ=255)
                                                                              aaaGCGCTTTCATTCAGTTTCCTCGCTTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCaa                                                                      <  2:1266121/150‑1 (MQ=255)
                                                                               aaGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAAc                                                                     <  1:570604/150‑1 (MQ=255)
                                                                               aaGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAAc                                                                     <  1:208549/150‑1 (MQ=255)
                                                                                    cTTTCATTCAGTTTCCTCGATTGGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCa                                                                <  2:1314279/150‑1 (MQ=255)
                                                                                     tttCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GCGCGGGCGAGCCAGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAg                                                               <  2:1227281/150‑1 (MQ=255)
                                                                                     tttCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAg                                                               <  1:1257473/150‑1 (MQ=255)
                                                                                         attcaGTTTCCTCGATTTGGGGCTGCTATGCAGCCCTTCTCGGGCTCGGCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTg                                                           >  1:1567840/1‑150 (MQ=255)
                                                                                          ttcaGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCctt                                                                                         <  2:1930347/119‑1 (MQ=255)
                                                                                          ttcaGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCctt                                                                                         >  1:1930347/1‑119 (MQ=255)
                                                                                          ttcaGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCAGCACAGCGGCCCCTTCTTCAAGACAACACATCATCGTTCAGTTTGc                                                          <  2:86935/150‑1 (MQ=38)
                                                                                           tcaGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAg                                                                                                                                               <  1:1189326/65‑1 (MQ=255)
                                                                                           tcaGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAg                                                                                                                                               >  2:1189326/1‑65 (MQ=255)
                                                                                             aGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAg                                                                                  >  2:181269/1‑123 (MQ=255)
                                                                                             aGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAg                                                                                  <  1:181269/123‑1 (MQ=255)
                                                                                                   cTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGcc                                                                                                                   >  2:1061315/1‑84 (MQ=255)
                                                                                                   cTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGcc                                                                                                                   <  1:1061315/84‑1 (MQ=255)
                                                                                                    tCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAgg                                                                                                           >  1:1390791/1‑91 (MQ=255)
                                                                                                    tCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAgg                                                                                                           <  2:1390791/91‑1 (MQ=255)
                                                                                                    tCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGTGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCg                                                >  2:1350863/1‑150 (MQ=255)
                                                                                                     cGATTTTGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGa                                               <  1:1222302/150‑1 (MQ=255)
                                                                                                          tGGGGCTGCTGTGCGGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACCAATCAACGTTCAGGTTGCCTATTACCCGATCAAg                                          <  2:608670/150‑1 (MQ=255)
                                                                                                          gggggCGGCTGTGCAGCCCATCTCGGGCTCGTCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAg                                          <  2:1498465/149‑1 (MQ=255)
                                                                                                            gggCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAggg                                        <  2:1138810/150‑1 (MQ=255)
                                                                                                            gggCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAggg                                        <  2:1985329/150‑1 (MQ=255)
                                                                                                              gctgctGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCa                                      >  2:510081/1‑150 (MQ=255)
                                                                                                               ctgctgTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCa                                                                <  2:892210/123‑1 (MQ=255)
                                                                                                               ctgctgTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCa                                                                >  1:892210/1‑123 (MQ=255)
                                                                                                                cgctgTGCGGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCgg                                                                                                                          >  2:1902816/2‑64 (MQ=255)
                                                                                                                cgctgTGCGGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCgg                                                                                                                          <  1:1902816/63‑1 (MQ=255)
                                                                                                                 gctgTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAAcc                                   >  1:2182494/1‑150 (MQ=255)
                                                                                                                    gtgCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCgg                                >  1:1658179/1‑150 (MQ=255)
                                                                                                                       cAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGGCTCTGTGG‑GAGCGGGCGAGCCCGCGAATGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGgcgc                             >  1:480131/1‑150 (MQ=255)
                                                                                                                        aGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGcc                            >  2:1690320/1‑150 (MQ=255)
                                                                                                                            cTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGccc                                                                                            <  1:1126469/82‑1 (MQ=255)
                                                                                                                            cTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGccc                                                                                            >  2:1126469/1‑82 (MQ=255)
                                                                                                                            cTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTgc                        >  1:1963070/1‑150 (MQ=255)
                                                                                                                            cTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACACGATCAAGGGCAACCCGGCGCCTTgc                        >  1:5191/1‑150 (MQ=255)
                                                                                                                                 cGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCtgg                   <  2:56430/150‑1 (MQ=255)
                                                                                                                                  gggCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCtggt                  >  2:1297128/1‑150 (MQ=255)
                                                                                                                                  gggCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCtggt                  <  1:1690320/150‑1 (MQ=255)
                                                                                                                                  gggCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCtggt                  <  2:407020/150‑1 (MQ=255)
                                                                                                                                   ggCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCtggtg                 <  2:1963070/150‑1 (MQ=255)
                                                                                                                                    gCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAAc                                                                     >  1:1871404/1‑97 (MQ=255)
                                                                                                                                    gCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAAc                                                                     <  2:1871404/97‑1 (MQ=255)
                                                                                                                                    gCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTCTTACCCGATCAAGGGCAACCCGGCGCCTTGCGCtggtgg                >  2:1916603/1‑150 (MQ=255)
                                                                                                                                      tCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTc              >  2:1900769/1‑150 (MQ=255)
                                                                                                                                      tCGCCCGCTCCACCAGGCCCATTGCAGTCGCTGCGG‑GATCGTGCGAGCCCGCGAAAGGCCGCACAGCGGCCCCTTCTTTAAGACCACAAATCAACGTGCAGCTTGCCTATTAACCGATCAAGGGCAACCCGGCGCCTTGCGCTGGCGGTc              >  2:671541/1‑150 (MQ=255)
                                                                                                                                         cccGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGCACGACCGGGCGCCTTGCGCTGGTGGTCTtc           >  1:577816/1‑150 (MQ=255)
                                                                                                                                           cGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTtcgt         >  2:359803/1‑150 (MQ=255)
                                                                                                                                            gCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTtcgtc        <  2:5191/150‑1 (MQ=255)
                                                                                                                                            gCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTtcgtc        >  1:2152398/1‑150 (MQ=255)
                                                                                                                                                ccACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTAc    <  1:1297128/150‑1 (MQ=255)
                                                                                                                                                 cacaGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACt   >  2:1517350/1‑150 (MQ=255)
                                                                                                                                                  acaGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACtt  >  2:619417/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
TCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGG‑GAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTT  >  NC_002947/5652860‑5653155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.