Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947322,1420TC38.3% 77.9 / 109.3 116intergenic (+427/+31)aguA/PP_0267agmatine deiminase/ferric siderophore receptor
Reads supporting (aligned to +/- strand):  ref base T (33/38);  new base C (20/24);  total (53/63)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.90e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 120 total aligned reads displayed.

ATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTCAGCAATGTTGCTCAATGCCGCCCGCA  >  NC_002947/321993‑322291
                                                                                                                                                      |                                                                                                                                                     
aTGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCt                                                                                                                                                       >  2:1040506/1‑150 (MQ=255)
        aTCAGGGTGAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCGCGCGAaga                                                                                                                                               <  1:171867/150‑1 (MQ=255)
        aTCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAaga                                                                                                                                               <  1:1540246/150‑1 (MQ=255)
        aTCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAaga                                                                                                                                               <  1:889376/150‑1 (MQ=255)
        aTCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAaga                                                                                                                                               >  2:1536393/1‑150 (MQ=255)
        aTCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAaga                                                                                                                                               <  2:168852/150‑1 (MQ=255)
        aTCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAaga                                                                                                                                               <  1:1500981/150‑1 (MQ=255)
        aTCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAaga                                                                                                                                               <  2:132312/150‑1 (MQ=255)
         tCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAagag                                                                                                                                              <  2:196815/150‑1 (MQ=255)
         tCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACATGCCTCTTCGCGAGCATGCCCGCGAagag                                                                                                                                              <  2:354857/150‑1 (MQ=255)
          cAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAgg                                                                                                                                             <  2:298606/150‑1 (MQ=255)
           aGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGAGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGAC‑CTGAAACGGTTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGc                                                                                                                                            >  1:1281349/1‑150 (MQ=255)
            gggTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGAAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGGTTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAAGAGGCa                                                                                                                                           <  2:325794/150‑1 (MQ=255)
             ggTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCATCCTCGCGGGCATGCTCGCGAAGAGGCAg                                                                                                                                          <  1:880213/150‑1 (MQ=255)
              gTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAgg                                                                                                                                         >  2:179928/1‑150 (MQ=255)
                   gacgacCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGCGGCAGGTACAg                                                                                                                                    >  1:1125932/1‑150 (MQ=255)
                   gacgacCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAg                                                                                                                                    <  1:1040506/150‑1 (MQ=255)
                   gacgacCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCAAAG‑AGCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGCGGCAGGTACAg                                                                                                                                    >  1:602394/1‑150 (MQ=255)
                    acgacCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAgg                                                                                                                                   <  1:179928/150‑1 (MQ=255)
                          gaccCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAagag                                                                                                                                              <  2:1219329/133‑1 (MQ=255)
                          gaccCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAagag                                                                                                                                              >  1:1219329/1‑133 (MQ=255)
                              cACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAagag                                                                                                                                              >  2:2202875/1‑129 (MQ=255)
                              cACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAagag                                                                                                                                              <  1:2202875/129‑1 (MQ=255)
                                cgacgTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATc                                                                                                                       <  1:244116/150‑1 (MQ=255)
                                    gTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTaaaa                                                                                                                         >  2:1877070/1‑144 (MQ=255)
                                          ttGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGa                                                                                                                                                  >  1:970807/1‑113 (MQ=255)
                                             ccGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAAGAGGCAGGTACAg                                                                                                                                    <  2:2228063/124‑1 (MQ=255)
                                             ccGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAAGAGGCAGGTACAg                                                                                                                                    >  1:2228063/1‑124 (MQ=255)
                                               gggCGATCCCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTAc                                                                                                        >  2:672287/1‑150 (MQ=255)
                                                        ccccAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTa                                                                                                                                       <  1:634030/110‑1 (MQ=255)
                                                        ccccAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTa                                                                                                                                       >  2:634030/1‑110 (MQ=255)
                                                        ccccAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAagag                                                                                                                                              <  1:320151/103‑1 (MQ=255)
                                                        ccccAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAagag                                                                                                                                              >  2:320151/1‑103 (MQ=255)
                                                         cccAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAagag                                                                                                                                              >  2:1587992/1‑102 (MQ=255)
                                                         cccAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAagag                                                                                                                                              <  1:1587992/102‑1 (MQ=255)
                                                          cccaGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAAGAGGCAg                                                                                                                                          <  1:2218497/102‑1 (MQ=37)
                                                          ccAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAAGAGGCa                                                                                                                                           >  2:601906/1‑104 (MQ=255)
                                                          ccAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGAGCATGCCCGCGAAGAGGCAg                                                                                                                                          >  2:2218497/1‑105 (MQ=255)
                                                           cAAGTGTTGATCAGCGAAGCAGCCGTCGAGGCGCTGATGGGGGTGTGGCACTG‑ATCGATTGAACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACACGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACaa                                                                                            <  2:942174/150‑1 (MQ=38)
                                                               ggTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTAccc                                                                                                      >  2:932750/1‑136 (MQ=255)
                                                               ggTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTAccc                                                                                                      <  1:932750/136‑1 (MQ=255)
                                                                   gATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACt                                                                                                                >  1:2165688/1‑122 (MQ=255)
                                                                   gATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACt                                                                                                                <  2:2165688/122‑1 (MQ=255)
                                                                      cAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGa                                                                                 <  1:1745067/150‑1 (MQ=255)
                                                                        gCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATc                                                                               <  1:2017808/150‑1 (MQ=255)
                                                                                       aGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTg                                                                >  1:1091944/1‑150 (MQ=255)
                                                                                         gcgcTGATGGCGGTGTGGCACTG‑ATCGATTGCAGCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGGCACCACAAGGCTACGCGCATCGCCCACCTGGATCTgcg                                                              <  2:602394/150‑1 (MQ=255)
                                                                                          cgcTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTgcgc                                                             <  2:1091944/150‑1 (MQ=255)
                                                                                           gcTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAg                                                                                                                                          <  1:1943773/72‑1 (MQ=255)
                                                                                           gcTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAg                                                                                                                                          >  2:1943773/1‑72 (MQ=255)
                                                                                           gcTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGcgcc                                                            <  1:1454845/150‑1 (MQ=255)
                                                                                                  gCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCa                                                                                                                                           >  2:1706523/1‑64 (MQ=255)
                                                                                                  gCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCa                                                                                                                                           <  1:1706523/64‑1 (MQ=255)
                                                                                                         ggCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCCTGCTAGGGACGAGGTAGCTACAGGCATTTTAAAATCAGAGACTCTAGCTACCCGTCACGACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGa                                              <  2:258736/150‑1 (MQ=255)
                                                                                                          gCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAg                                             <  1:672287/150‑1 (MQ=255)
                                                                                                          gCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAg                                             >  1:1347270/1‑150 (MQ=255)
                                                                                                           cACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGc                                            <  1:1784917/150‑1 (MQ=255)
                                                                                                            aCTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCTCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAg                                                                                                            <  2:1367386/85‑1 (MQ=255)
                                                                                                            aCTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCTCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAg                                                                                                            >  1:1367386/1‑85 (MQ=255)
                                                                                                            aCTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCt                                           >  2:573626/1‑150 (MQ=255)
                                                                                                            aCTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCt                                           >  1:1967540/1‑150 (MQ=255)
                                                                                                                    gATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGtagtag                                    <  1:573626/150‑1 (MQ=255)
                                                                                                                    gATTGCACCTGTAACTGCCTCTACGCAGGCATGCTCGCGACGAGGCAGGTATAGGGAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGCATCTGCGCCGCCCTGGTCGCCGAGCTGtagtag                                    <  2:1281349/150‑1 (MQ=255)
                                                                                                                     aTTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACGGGCACCTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTc                                                   <  1:1986793/134‑1 (MQ=255)
                                                                                                                     aTTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACGGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTc                                                   >  2:1986793/1‑134 (MQ=255)
                                                                                                                          aCCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCAc                                                        >  2:1456411/1‑124 (MQ=255)
                                                                                                                          aCCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCAc                                                        <  1:1456411/124‑1 (MQ=255)
                                                                                                                               tACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTCAGc                         <  2:1347270/150‑1 (MQ=255)
                                                                                                                                  cTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTCGTAGGTCTTGTCAGCCAt                      >  2:169628/1‑150 (MQ=255)
                                                                                                                                  cTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAATAGGTCTTGTCAGCAAt                      >  1:699329/1‑150 (MQ=255)
                                                                                                                                    gCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTg                                          <  1:96421/128‑1 (MQ=255)
                                                                                                                                    gCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTg                                          >  2:96421/1‑128 (MQ=255)
                                                                                                                                      ctctTCGCGAGCATGCCCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTgcgc                                                             >  1:1730522/1‑107 (MQ=255)
                                                                                                                                      ctctTCGCGAGCATGCCCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTgcgc                                                             <  2:1730522/107‑1 (MQ=255)
                                                                                                                                      ctctTCGCGAGCATGCCCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTgcgc                                                             <  2:1729470/107‑1 (MQ=255)
                                                                                                                                       tctTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTc                                 <  1:133350/134‑1 (MQ=255)
                                                                                                                                       tctTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTCAGCAATGTTGc                 >  1:1438986/1‑150 (MQ=255)
                                                                                                                                       tctTCGCGAGCATGCCCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCt                                                                       >  2:1274769/1‑96 (MQ=255)
                                                                                                                                       tctTCGCGAGCATGCCCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTgg                                                                     >  2:836391/1‑98 (MQ=255)
                                                                                                                                       tctTCGCGAGCATGCCCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTgg                                                                     <  1:836391/98‑1 (MQ=255)
                                                                                                                                       tctTCGCGAGCATGCCCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGc                                            >  2:879239/1‑123 (MQ=255)
                                                                                                                                       tctTCGCGAGCATGCCCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGc                                            <  1:879239/123‑1 (MQ=255)
                                                                                                                                       tctTCGCGAGCATGCCCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGtagtag                                    <  1:1182523/131‑1 (MQ=255)
                                                                                                                                       tctTCGCGAGCATGCCCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGtagtag                                    >  2:1182523/1‑131 (MQ=255)
                                                                                                                                       tctTCGCGAGCATGCCCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTCAGCAATGTTGc                 >  1:626229/1‑150 (MQ=255)
                                                                                                                                        ctTCGCGAGCATGCCCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGcc                                                                            <  1:2111428/90‑1 (MQ=255)
                                                                                                                                        ctTCGCGAGCATGCCCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGcc                                                                            >  2:2111428/1‑90 (MQ=255)
                                                                                                                                         ttCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTgcg                                                              <  1:1547449/103‑1 (MQ=255)
                                                                                                                                         ttCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTgcg                                                              >  2:1547449/1‑103 (MQ=255)
                                                                                                                                         ttCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTCAGCAATGTTGCTc               >  1:1383959/1‑150 (MQ=255)
                                                                                                                                         ttCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTCAGCAATGTTGCTc               <  1:285012/150‑1 (MQ=255)
                                                                                                                                         ttCGCGAGCATGCCCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTCAGCAATGTTGCTc               >  2:1732098/1‑150 (MQ=255)
                                                                                                                                              gggCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTCAGCAATGTTGCTCAATgc          <  2:1420716/150‑1 (MQ=255)
                                                                                                                                                gCATGCCCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTCAGCAATGTTGCTCAATgccg        >  1:262939/1‑150 (MQ=255)
                                                                                                                                                  aTGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTCAGCAATGTTg                  >  2:471013/1‑138 (MQ=255)
                                                                                                                                                  aTGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTCAGCAATGTTg                  <  1:471013/138‑1 (MQ=255)
                                                                                                                                                   tGCCCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTc                            <  1:1834168/127‑1 (MQ=255)
                                                                                                                                                      tCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTAcgc                                                                                    >  2:1406577/1‑68 (MQ=255)
                                                                                                                                                      tCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTAcgc                                                                                    <  1:1406577/68‑1 (MQ=255)
                                                                                                                                                      tCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTCAGCAATGTTGCTCAATGCCGCCCGca  >  1:797460/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
ATGGAAGCATCAGGGTCAGGACGACCGACCCACGACGTCTGCTTGCCGGGCGATACCCCCAAGGGTTGATCAGCGAAGCAGAGATGCAGGCGCTGATGGCGGTGTGGCACTG‑ATCGATTGCACCTGTACCTGCCTCTTCGCGGGCATGCTCGCGAAGAGGCAGGTACAGGCAACTTAAAATCAGAAACTGTAGCTACCCGTCACCACAAGGCTACGCGGATCGCCCACCTGGATCTGCGCCGCACTGGTCGCCGAGCTGTAGTAGGTCTTGTCAGCAATGTTGCTCAATGCCGCCCGCA  >  NC_002947/321993‑322291

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑