New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2295818 =	49 (0.890)	12 (0.260)	9/232	4.4	23.2%	intergenic (+21/+112)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
	?	NC_002947	2295903 =	39 (0.860)					intergenic (+106/+27)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
Rejected: Coverage evenness skew score above cutoff.

GGAGCTGGCTGGAGGGGTGGCTGGCTTCGGAGCTGTTCAAGGCAATCATGGTCCGCTGATTAAACATCGGGCTGCACATGGGTCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2295988‑2295818 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcatgcccgctcccacaCGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCGGATAAGCCGCCTCGGCGAACCACTGCGGTTCGACCCCGGCAAACTGGCGC  >  NC_002947/2295903‑2296047                                                                                                                                                                                                                                                                                                                              GGAGCTGGCTGGAGGGGTGGCTGGCTTCGGAGCTGTTCAAGGCAATCATGGTCCGCTGATTAAACATCGGGCTGCACATGGGTCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTC                                                                                                                                                                        >  1:174715/1‑150  GAGCTGGCTGGAGGGGTGGCTGGCTTCGGAGCTGTTCAAGGCAAACATGGTCCGCTGATTAAACATCGACCTTCACATGGGTCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCG                                                                                                                                                                       >  1:1077650/1‑150     CTGGCTGGAGGGGTGGCTGGCTTCGGAGCTGTTCAAGGCAATCATGGTTCGCTGATTAAACATCGGGCTGCACATGGGTCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGG                                                                                                                                                                    <  1:907242/150‑1       GGCTGGAGGGGTGGCTGGCTTCGGAGCTGTTCAAGGCAATCATGGTCCGCTGATTAAACATCGGGCTGCACATGGGTCCGGGTGGGAGCGGGCATGCCGGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGC                                                                                                                                                                  <  1:536505/150‑1           GGAGGGGTGGCTGGCTTCGGAGCTGTTCAAGGCAATCATGGTCCGCTGATTAAACATCGGGCTGCACATGGGTCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGC                                                                                                                                                              <  1:7064/150‑1             AGGGGTGGCTGGCTTCGGAGCTGTTCAAGGTAATCATGGTCCGCTGATTAAACATCGGGCTGCACATGGGTCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCC                                                                                                                                                            <  1:457685/150‑1               GGGTGGCTGGCTTCGGAGCTGTTCAAGGCAATCATGGTCCGCTGATTAAACATCGGGCTGCACATGGGTCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGC                                                                                                                                                          >  1:94937/1‑150                    GCTGGCTTCGGAGCTGGTCAAGGCAATCATGGTCCGCTGATTAAACATCGGGCTGCACATGGGTCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCA                                                                                                                                                     <  2:486112/150‑1                      TGGCTTCGGAGCTGTTCAAGGCAATCATGGTCCGCTGATTAAACATCGGGCTGCACATGGGTCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACA                                                                                                                                                   >  2:206929/1‑150                                              TCATGGTCCGCTGATTAAACATCGGGCTGCACATGGGTCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCG                                                                                                                                                                     <  1:824672/108‑1                                              TCATGGTCCGCTGATTAAACATCGGGCTGCACATGGGTCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCG                                                                                                                                                                     >  2:824672/1‑108                                                                            ACATGGGTCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAAGGACCTATGTGCAGCCCGATGTTTAATCAGCGGA                                                                                                                <  2:123458/131‑1                                                                            ACATGGGTCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAAGGACCTATGTGCAGCCCGATGTTTAATCAGCGGA                                                                                                                >  1:123458/1‑131                                                                                                GGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAA                                                                                                <  2:290653/127‑1                                                                                                GGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAA                                                                                                >  1:290653/1‑127                                                                                                    ATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAG                                                                     >  1:1027329/1‑150                                                                                                        CCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACACGGA                                                                                                                                               >  1:308703/1‑72                                                                                                        CCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACACGGA                                                                                                                                               <  2:308703/72‑1                                                                                                        CCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACACGGA                                                                                                                                               >  2:1056361/1‑72                                                                                                        CCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACACGGA                                                                                                                                               <  1:1056361/72‑1                                                                                                        CCGCGAAGCGGGCACCGAGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAG                                                                 >  2:854369/1‑150                                                                                                            GAAGCGGGCACCGCGGAGGATGGCACCTAGCCTGCCGGTGTTCTCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACTATGATTGCCTTGAAAAACTCCGAAGCCAGCCACCCCTCCAGCCAGCTCC                                                             >  1:307930/1‑150                                                                                                                  GGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACAC                                                       >  2:1097365/1‑150                                                                                                                                                          GGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGGCCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCGGATAAGCCGCCTCGGCGAGCGACTACGTTTCGAGCCC               >  1:976226/1‑150                                                                                                                                                           GCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCGGATAAGCCGCCTCGGCGAACCACTGCGGTTCGACCCCG              <  1:1180379/150‑1                                                                                                                                                               ggCCGCTCCCTCACTGACACATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCCCCCCTCCCGCCAGCTCCGCACACGCGGATAAGCCGCCTCGGCGAACCACTGCGGTTCGACCCCGGCAA          <  2:1195235/148‑1                                                                                                                                                                 CCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAA                                                                                      >  2:977638/1‑72                                                                                                                                                                 CCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAA                                                                                      <  1:977638/72‑1                                                                                                                                                                   GCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCGGATAAGCCGCCTCGGCGAACCACTGCGGTTCGACCCCGGCAAACTG      <  1:842757/150‑1                                                                                                                                                                       CCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCGGATAAGCCGCCTCGGCGAACCACTGCGGTTCGACCCCGGCAAACTGGCGC  >  1:1229215/1‑150                                                                                                                                                                       CCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCGGATAAGCCGCCTCGGCGAACCACTGCGGTTCGACCCCGGCAAACTGGCGC  >  1:1177153/1‑150                                                                                                                                                                        CACACGGACCCATGTGCAGCCCGATGTTTAATCAGCG                                                                                                                  <  2:473144/37‑1                                                                                                                                                                        CACACGGACCCATGTGCAGCCCGATGTTTAATCAGCG                                                                                                                  >  1:473144/1‑37                                                                                                                                                                                                                                                                                                                              GGAGCTGGCTGGAGGGGTGGCTGGCTTCGGAGCTGTTCAAGGCAATCATGGTCCGCTGATTAAACATCGGGCTGCACATGGGTCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2295988‑2295818 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcatgcccgctcccacaCGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTCCGCACACGCGGATAAGCCGCCTCGGCGAACCACTGCGGTTCGACCCCGGCAAACTGGCGC  >  NC_002947/2295903‑2296047

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.