| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 1,443,379 | C→A | A272S (GCC→TCC) | PP_1262 ← | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,443,379 | 0 | C | A | 99.7% | 991.3 / NA | 308 | A272S (GCC→TCC) | PP_1262 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base A (178/129); total (179/129) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 308 total aligned reads displayed.
TTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGCATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCA > NC_002947/1443232‑1443525 | ttGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAAt > 2:4085226/1‑150 (MQ=255) agcagcTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGTCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACat < 1:5614563/150‑2 (MQ=255) agcagcTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAg < 1:2971296/150‑1 (MQ=255) gcTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGTATGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGCTGGATAGATGGAATACacgctc > 2:2373067/1‑145 (MQ=255) tttttAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCaa > 1:4749750/1‑150 (MQ=255) tttttAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCaa < 1:3783276/150‑1 (MQ=255) ttttAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAAc < 2:3980567/150‑1 (MQ=255) tAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTcc > 1:7152356/1‑150 (MQ=255) gCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAgg < 1:4541228/150‑1 (MQ=255) gATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCg > 1:6984019/1‑150 (MQ=255) aTCAGCACCTGATGGGATTTCAGGTCTGCCTCATGCGCGGCAAGAATCGCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGa > 2:2072804/1‑150 (MQ=255) gCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACt > 2:5915268/1‑150 (MQ=255) cACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTc > 2:486000/1‑150 (MQ=255) cACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTc > 2:1134487/1‑150 (MQ=255) cTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCgg < 2:1199270/150‑1 (MQ=255) gATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCa < 2:5791998/150‑1 (MQ=255) gATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCa < 2:3756332/150‑1 (MQ=255) gATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCa > 1:3211917/1‑150 (MQ=255) ctGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAg > 2:2490372/2‑150 (MQ=255) tGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGt > 1:4899841/1‑150 (MQ=255) gTTNTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTAcc > 2:4462385/1‑150 (MQ=255) tttCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCg > 1:365185/1‑150 (MQ=255) gTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGC‑CCTATATTACTGCCGCGATGGATAGATGGCATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAg > 1:3339821/1‑150 (MQ=255) tGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCt > 1:2676281/1‑150 (MQ=255) tGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCt > 2:2288781/1‑150 (MQ=255) cccTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTa < 1:5003505/149‑1 (MQ=255) ccccATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTAc > 1:1427050/4‑150 (MQ=255) ccTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTAc > 2:1622389/1‑150 (MQ=255) cTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTAcc < 1:4660764/150‑1 (MQ=255) cctgagcgGCAAGAATCTGTGGCAGCGGGTTGCGCAGGTACTCGACCCAGGTCTTCCTCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATTCAGGGTCAACTCCTGCAGGCGATACTCCGGCAGTACCCCTACCAGGCTACCGt < 2:2592914/145‑1 (MQ=255) tGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGAGCCAGGGCGGTTTCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTcc > 2:2789829/1‑150 (MQ=255) gcgGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGc > 1:6065962/1‑150 (MQ=255) gcgGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGATCTGGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGc > 1:1665489/1‑150 (MQ=255) ggCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAg > 1:6427445/1‑150 (MQ=255) aGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGccc > 2:6403382/1‑150 (MQ=255) aaTCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTc > 1:1171235/1‑150 (MQ=255) tctcTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGa > 2:6291436/1‑150 (MQ=255) ctctGGCAGCGAGTTGCGCAGGTCCTCGACCCATGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGAt < 1:28524/150‑1 (MQ=255) tctGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATa < 1:5109379/150‑1 (MQ=255) tctGGCAGCGAGTTGCGCAGGGACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATa < 1:1701059/150‑1 (MQ=255) tGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGc > 1:902199/1‑150 (MQ=255) ggCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGcc < 1:4085226/150‑1 (MQ=255) cAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGa > 2:6539012/1‑150 (MQ=255) aGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGaa > 1:3076137/1‑150 (MQ=255) aGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGaa > 1:1556317/1‑150 (MQ=255) aGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGa > 2:5478166/1‑150 (MQ=255) gTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGAt > 1:1795395/1‑150 (MQ=255) ttGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATc < 1:2072804/150‑1 (MQ=255) ttGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATc > 1:6286012/1‑150 (MQ=255) cgcAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGgc < 2:2176037/150‑1 (MQ=255) cgcAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGgc > 2:334102/1‑150 (MQ=255) cgcAGGTACCCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGGCCTCGATAGGCGAATAGATCGgc < 2:3534753/150‑1 (MQ=255) gcAGGTACTCGACCCAGGTCTTGATCTTGGCCTCCAAG‑TACTACCGCGGTGGTTATATGGAATACAGGTTTAACTCATCCAGCCGATTCTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGgca > 1:5179827/1‑150 (MQ=255) gcAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGgca > 2:6216313/1‑150 (MQ=255) gcAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGgca > 2:6074936/1‑150 (MQ=255) gTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCAc > 1:2324982/1‑150 (MQ=255) tACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACg > 2:6426888/1‑150 (MQ=255) aCTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACTGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGc > 1:6781773/1‑150 (MQ=255) aCTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGc > 1:7117088/1‑150 (MQ=255) cTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGcc > 2:2285154/1‑150 (MQ=255) gACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTAc > 1:5057734/1‑150 (MQ=255) aCCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACg > 2:5133494/1‑150 (MQ=255) cccAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCACCTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGc < 1:4340471/150‑1 (MQ=255) cccAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGc < 2:567077/150‑1 (MQ=255) ccAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTc < 1:4824280/117‑1 (MQ=255) ctggTCGTGATCTTGGCATCAGGA‑TAAAGCTGCGAGAGATATAGGTAATTCAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGccc < 2:3600092/148‑1 (MQ=255) aGGTCTTGGTCTTGGCATCCAGA‑TACTGCCGCGATGGAGAGATGGAATACAGGAACAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGCCTACCGTCCCGCCGGCCCTCGATAGCCGAACAGATCGGCAGCACGCCTACGCCCa > 2:532487/1‑150 (MQ=255) tCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGc > 2:827174/1‑150 (MQ=255) ttGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCa < 1:3560642/150‑1 (MQ=255) gATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACt < 2:2676281/150‑1 (MQ=255) aTCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGc < 2:6651096/145‑1 (MQ=255) aTCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTg < 2:3047236/150‑1 (MQ=255) ttGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCgg > 1:1241566/1‑150 (MQ=255) tGGCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACCGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGa < 1:931696/150‑1 (MQ=255) ggCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCTGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGAt > 1:6512240/1‑150 (MQ=255) ggCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAgg < 2:3116061/82‑1 (MQ=255) ggCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGAt > 2:4968712/1‑150 (MQ=255) gCATCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACACCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATc < 1:784298/150‑1 (MQ=255) aTCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGc > 1:6134545/1‑150 (MQ=255) tCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCa < 2:3293965/150‑1 (MQ=255) tCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCa < 1:2288605/150‑1 (MQ=255) tCCAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCACGCCGCCTACGCCCATGCCACTGCGGATCGCa < 1:1318694/150‑1 (MQ=255) cAGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGt > 2:463743/1‑150 (MQ=255) aGA‑TACTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTc > 2:6439923/1‑150 (MQ=255) aGA‑TACTGCCGCGAATGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTc < 1:2490372/150‑1 (MQ=255) tACTGCCGCGATGGATAGATGGAATACAGGTTCACCTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTc < 1:3931218/150‑1 (MQ=255) cTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCAt < 2:4749750/150‑1 (MQ=255) cTGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCAt > 1:3271071/1‑150 (MQ=255) tGCCGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAgg > 2:324597/1‑84 (MQ=255) ccGCGATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCa < 2:1390787/53‑1 (MQ=255) cgcgATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATAGCAGTCTTcccggcc > 2:4316696/1‑144 (MQ=255) gcgATGGATAGATGGAATACAGGTTCAACTCCTGCAGGCGATCCTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCAt < 1:5845780/150‑1 (MQ=255) ggATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATcggcg < 1:4462385/150‑1 (MQ=255) ggATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATcggcg < 1:3459064/150‑1 (MQ=255) ggATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATcggcg > 1:5920054/1‑150 (MQ=255) gATAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATcggcgg > 2:6942123/1‑150 (MQ=255) aTAGATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGgt < 2:7152356/150‑1 (MQ=255) gATGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGtt < 1:4278801/150‑1 (MQ=255) aTGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTc < 1:6539012/150‑1 (MQ=255) tGGAATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCa > 2:5820495/1‑150 (MQ=255) | TTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGA‑TACTGCCGCGATGGATAGATGGCATACAGGTTCAACTCCTGCAGGCGATACTCCGGCAGTACCCGTACCAGGCTACCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCA > NC_002947/1443232‑1443525 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |