| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 447,151 | Δ1 bp | 8.7% | intergenic (+28/‑274) | PP_0368 → / → PP_0369 | acyl‑CoA dehydrogenase/diguanylate cyclase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 447,151 | 0 | G | . | 8.7% | 216.4 / 15.5 | 69 | intergenic (+28/‑274) | PP_0368/PP_0369 | acyl‑CoA dehydrogenase/diguanylate cyclase |
| Reads supporting (aligned to +/- strand): ref base G (37/26); new base . (2/4); total (39/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.92e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.72e-01 | |||||||||||
CTGCGCGCTTCTACTTCCAGCGCATCCTGCCACGTACCCGTACCCATGTGGCGACCATGCTGTCGGGCGCCAACAACCTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGCCGTTCACCGTTGCCAGCGCTACCGTATTCGCGGGTAAACCCG > NC_002947/447005‑447299 | cTGCGCGCTTCTACTTCCAGCGCATCCTGCCACGTACCCGTACCCATGTGGCGACCATGCTGTCGGGCGCCAACCACCTGATGGCGCTGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCCCTGTACCCAATACCCGCCTGccc < 2:1003968/150‑1 (MQ=255) gcTTCTACTTCCAGCGCATCCTGCCACGTACCCGTACCCATGTGGCGACCATGCTGTCGGGCGCCAACAACCTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCg > 2:583058/1‑150 (MQ=255) ttCTACTTCCAGCGCATCCTGCCACGTACCCGTACCCATGTGGCGACCATGCTGTCGGGCGCCAACAACCTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCggg > 2:502562/1‑150 (MQ=255) tACTTCCAGCGCATCCTGCCACGTACCCGTACCCATGTGGCGACCATGCTGTCGGGCGCCAACAACCTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑Agg > 2:176199/1‑150 (MQ=255) aCTTCCAGCGCATCCTGCCACGTACCCGTACCCATGTGGCGACCATGCTGTCGGGCGCCAACAACCTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGc < 2:542755/150‑1 (MQ=255) ttCCGGCGCATCCTGCAACGTACCCGTACCCACGTGGCGACCATGCTGTCGGGCCCCAACGACCTGATGGGGATGGACGAAGAGCACTTCGGCGTGTCGTACTGAGACTGGCGCTGTACCCAAAACCCGCGTGCCCTGACCGGG‑AGGcag > 2:718803/1‑148 (MQ=255) ttCCAGCGCATCCTGCCACGTACCCGTACCCATGTGGCGACCATGCTGTCGGGCGCCAACAACCTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCgg < 1:176199/150‑1 (MQ=255) cAGCGCATCCTGCCACGTACCCGTACCCATGTGGCGACCATGCTGTCGGGCGCCAACAACCTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGtt < 1:959925/150‑1 (MQ=255) cgcATCCTGCCACGTACCCGTACCCATGTGGCGACCATGCTGTCGGGCGCCAACAACCTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGttttt < 1:741490/150‑1 (MQ=255) cgcAGCCGGCCACGTACCCGGACCCATGTGGCGACCAGGGTGTCGGGCGCCAACAACCTGAGGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCT‑CCCGGTCAGGGCAGGCGGGttttg < 1:1193778/150‑2 (MQ=255) gcATCCTGCCACGTACCCGTACCCATGTGGCGACCATGCTGTCGGGCGCCAACAACCTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCT‑CCCGGTCAGGGCAGGCGGGttttgg < 1:763967/150‑3 (MQ=38) ccACGTACCCGTACCCATGTGGCGACCATGCTGTCGGGCGCCAACAACCTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTc < 1:1195522/150‑1 (MQ=255) cACGTACCCGTACCCATGTGGCGACCATGCTGTCGGGCGCCAACAACCTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCgg > 1:1013515/1‑134 (MQ=255) cACGTACCCGTACCCATGTGGCGACCATGCTGTCGGGCGCCAACAACCTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCgg < 2:1013515/134‑1 (MQ=255) aCGTACCCGTACCCATGTGGCGACCATGCTGTCGGGCGCCAACAACCTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAg > 2:618456/1‑150 (MQ=255) gtacccgtacccATGTGGCGACCATGCTGTCGGGCGCCAACAACCTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGt > 1:83288/1‑150 (MQ=255) acccATGTGGCGACCATGCTGTCGGGCGCCAACAACCTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTg < 1:583058/150‑1 (MQ=255) gACCATGCTGTCGGGCGCCAACAACCTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAg > 2:851093/1‑150 (MQ=255) gACCATGCTGTCGGGCGCCAACAACCTGATGGCGATGGACGAAGAGCACTTCGGCATGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGGTTTTTACGTTTTCAGGTTCAGCGTGGTCCCTCGTAg > 2:1132228/1‑150 (MQ=255) tGTCGGGCGCCAACAACCTGATGGCGATGGACGAAGAGCACTTCGGCCTGTTGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGt > 2:849453/1‑150 (MQ=255) gTCGGGCGCCAACAACCTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGtt > 1:588665/1‑150 (MQ=255) ggCGCCAACAACCTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTAcc < 1:851093/150‑1 (MQ=255) gcCAACAACCTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCcgc < 2:425780/150‑1 (MQ=255) caccaacCTGATGGCGCTGGACGAAGAGCACTTCGGCCTGCCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCATCGTGGTCCCTCGTAGGAGCGGGTTTACCcgcgg > 2:1156278/4‑149 (MQ=255) caacaaCCTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGATTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGa > 2:436579/1‑150 (MQ=255) caacaaCCTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCT‑CCCGGTCAGGGCAGGCGGGtttt > 2:755948/1‑99 (MQ=25) caacaaCCTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCT‑CCCGGTCAGGGCAGGCGGGtttt < 1:755948/99‑1 (MQ=25) ccTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAg > 1:914527/1‑126 (MQ=255) ccTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAg < 2:914527/126‑1 (MQ=255) tGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAggccg > 1:112174/1‑150 (MQ=255) gACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGc > 2:1035330/1‑150 (MQ=255) cGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAggcc < 1:251003/136‑1 (MQ=255) cGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAggcc > 2:251003/1‑136 (MQ=255) aCTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCAt > 2:817448/1‑150 (MQ=255) ttCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTAc > 1:111853/1‑72 (MQ=255) ttCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTAc < 2:111853/72‑1 (MQ=255) ttCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCa > 1:59992/1‑150 (MQ=255) tCGGCCTGTTGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAg < 1:849453/150‑1 (MQ=255) ggCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGcc < 2:83288/150‑1 (MQ=255) ccTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGCCGt < 1:1035330/150‑1 (MQ=255) ccTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCT‑CCCGGTCAGGGCAGGCGGGtttt > 1:910216/1‑63 (MQ=9) ccTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCT‑CCCGGTCAGGGCAGGCGGGtttt < 2:910216/63‑1 (MQ=9) cTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTc > 1:963092/1‑91 (MQ=255) cTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTc < 2:963092/91‑1 (MQ=255) tGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGCCGTTc > 2:1494/1‑150 (MQ=255) tGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGCCGTTc > 2:993521/1‑150 (MQ=255) gTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGGTTTTTACGTCTTCAGGTTCAGCGTGGTCTCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGCCGTTCa > 2:617103/1‑150 (MQ=255) aTACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGCCGTTCACCGTTGCCa > 1:377717/1‑150 (MQ=255) tACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGCCGTTCACCGtt < 1:577149/134‑1 (MQ=255) tACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGCCGTTCACCGtt > 2:577149/1‑134 (MQ=255) cccAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGATTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGTCCCTGCTGTCCAATTTCCATCAGCCGTTCACCGTTGCCAGCGCTACCGTATTc > 2:135969/1‑150 (MQ=255) ccAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCTAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGCCGTTCAc > 2:1189325/1‑127 (MQ=255) ccAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGCCGtt < 1:893644/124‑1 (MQ=255) ccAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGCCGtt > 2:893644/1‑124 (MQ=255) ccAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGCCGTTCACCGTTGCCAGCGCTACCGTATTcg > 2:348420/1‑150 (MQ=255) ccAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAAGCTCCATCAGCCGTTCAc < 1:1189325/127‑1 (MQ=255) cAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGCCGTTCACCGTTGCCAGCGCTACCGTATTcgc > 2:493353/1‑150 (MQ=255) cAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGCCGTTCACCGTTGCCAGCGCTACCGTATTcgc > 1:93732/1‑150 (MQ=255) aagaCCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAggc > 1:1205813/4‑91 (MQ=255) aaaaCCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAggc < 2:1205813/91‑1 (MQ=255) aaaaCCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGCCGTTCACCGTTGCCAGCGCTACCGTATTcgcg > 1:862060/1‑150 (MQ=255) aaaCCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGCCGTTCACCGTTGCCAGCGCTACCGTATTCGCgg < 2:59992/150‑1 (MQ=255) aaaCCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGCCGTTCACCGTTGCCAGCGCTACCGTATTCGCgg < 1:817448/150‑1 (MQ=255) aaCCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGCCGTTCACCGTTGCCAGCGCTACCGTATTCGCggg < 1:993521/150‑1 (MQ=255) cccGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGc < 1:398649/114‑1 (MQ=255) cccGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGc > 2:398649/1‑114 (MQ=255) ccGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGCCGTTCGCCGTTGCCAGCGCTACCGTATTCGCGGGTaa > 1:809986/1‑150 (MQ=255) gCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGCCGTTCACCGTTGCCAGCGCTACCGTATTCGCGGGTAAAc < 1:618456/150‑1 (MQ=255) tGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGCCGTTCACCGTTGCCAGCGCTACCGTATTCGCGGGTAAACCCg > 1:26654/1‑150 (MQ=255) | CTGCGCGCTTCTACTTCCAGCGCATCCTGCCACGTACCCGTACCCATGTGGCGACCATGCTGTCGGGCGCCAACAACCTGATGGCGATGGACGAAGAGCACTTCGGCCTGTCGTACTGATACTGGCGCTGTACCCAAAACCCGCCTGCCCTGACCGGG‑AGGCGGGTTTTTTACGTCTTCAGGTTCAGCGTGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCATCAGCCGTTCACCGTTGCCAGCGCTACCGTATTCGCGGGTAAACCCG > NC_002947/447005‑447299 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |