Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,296,137 Δ1 bp 7.3% coding (393/600 nt) PP_2023 ← glutathione S‑transferase family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,296,1370C. 7.3% 169.4 / 8.2 55coding (393/600 nt)PP_2023glutathione S‑transferase family protein
Reads supporting (aligned to +/- strand):  ref base C (27/24);  new base . (2/2);  total (29/26)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.08e-01

CGCACACGCGGATAAGCCGCCTCGGCGAACCACTGCGGTTCGACCCCGGCAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGTACAGGTTCACGTGCGCCTTGAACGTGGTGTCATTGCGCGCAATCAGCGTTTCAGCCTGCTGCGCAGCCGCAGGGTTGGCCTGTA  >  NC_002947/2295988‑2296285
                                                                                                                                                      |                                                                                                                                                     
cGCACACGCGGATAAGCCGCCTCGGCGAACCACTGCGGTTCGACCCCGGCAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCgccagc                                                                                                                                                       <  2:1178438/150‑1 (MQ=255)
  cacaCGCGGATAAGCCGCCTCGGCGAACCACTGCGGTTCGACCACGGCAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCgccagcca                                                                                                                                                     <  1:1036936/150‑1 (MQ=255)
   acacGCGGATAAGCCGCCTCGGCGAACCACTGCGGTTCGACCCCGGCAAACTGGCGCATCAGGGGCAGCACAGCGGGAGCGGCCATGCTCCTTTGGTCGGCCAGCAGGTACGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGccagccag                                                                                                                                                    <  1:147518/150‑1 (MQ=255)
   acacGCGGATAAGCCGCCTCGGCGAACCACTGCGGTTCGACCCCGGCAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCAGCCAGCAAGCCTTCGAGCTCCGccagccag                                                                                                                                                    <  1:933346/150‑1 (MQ=255)
       gcgGATAAGCCGCCTCGGCGAACCACTGCGGTTCGACCCCGGCAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCt                                                                                                                                                >  2:1005863/1‑150 (MQ=255)
        cgGATAAGCCGCCTCGGCGAACCACTGCGGTTCGACCCCGGCAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTc                                                                                                                                               <  1:1005863/150‑1 (MQ=255)
           aTAAGCCGCCTCGGCGAACCACTGCGGTTCGACCCCGGCAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGc                                                                                                                                            >  2:3942/1‑150 (MQ=255)
               gccgccTCGGCGAACCACTGCGGTTCGACCCCGGCAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCctgc                                                                                                                                       >  2:672670/1‑150 (MQ=255)
                ccgccTCGGCGAACCACTGCGGTTCGACCCCGGCAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCctgct                                                                                                                                      >  1:64421/1‑150 (MQ=255)
                ccgccTCGGCGAACCACTGCGGTTCGACCCCGGCAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCctgct                                                                                                                                      >  2:393264/1‑150 (MQ=255)
                ccgccTCGGCGAACCACTGCGGCTCGACCCCGGCAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCctgct                                                                                                                                      >  1:567132/1‑150 (MQ=255)
                  gccTCGGCGAACCACTGCGGTTCGACCCCGGCAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTgg                                                                                                                                    <  2:862469/150‑1 (MQ=255)
                      cGGCGAACCACTGCGGTTCGACCCCGGCAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCAGGCCGAGGCCTGGCTGGCgga                                                                                                                                <  2:598076/150‑2 (MQ=255)
                       ggCGAACCACTGCGGTTCGACCCCGGCAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTa                                                                                                                               >  1:524889/1‑150 (MQ=255)
                       ggCGAACCACTGCGGTTCGACCCCGGCAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTa                                                                                                                               <  1:393264/150‑1 (MQ=255)
                           aaCCACTGGGGTTCGACCCCGGCAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGc                                                                                                                           <  2:524889/150‑1 (MQ=255)
                                 tGCGGTTCGACCCCGGCAAACTGGCGCATGAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCgg                                                                                                                     >  1:232174/1‑150 (MQ=255)
                                 tGCGGTTCGACCCCGGCAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTCAAAACGCCCCGCCAGCAAGCCTTCGAGCTCCGACCGCCAGGCGGCGATGTGCTGGCGGTAAGGCTCGCgg                                                                                                                     >  1:327448/1‑150 (MQ=255)
                                    ggctCGACCCCGGCAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGaa                                                                                                                  <  2:567132/147‑1 (MQ=255)
                                    ggTTCGACCCCGGCAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGaa                                                                                                                  <  1:26519/150‑1 (MQ=255)
                                         gaacccGGCAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTc                                                                                                             >  2:1104145/4‑150 (MQ=255)
                                           ccccGGCAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCg                                                                                                           <  2:112084/150‑1 (MQ=255)
                                            cccGGCAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCgg                                                                                                          <  2:497975/150‑1 (MQ=255)
                                             ccGGCAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCTTGCTATCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTACTGCTCGCGGGAATGCTCCggg                                                                                                         >  1:380132/1‑150 (MQ=255)
                                             ccGGCAAACTGGCGCATCAGGGGCAGCAACGAGGGATGGGACATGCTAGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCggg                                                                                                         >  1:210718/1‑150 (MQ=255)
                                                 cAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAAc                                                                                                     <  2:223143/150‑1 (MQ=255)
                                                 cAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAAc                                                                                                     <  1:672670/150‑1 (MQ=255)
                                                     cTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTc                                                                                                 <  2:983974/150‑1 (MQ=255)
                                                      tGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTTGGGCCGTTGGTCCCGCAGCAAGTCGTCCGCGTCATCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCg                                                                                                >  1:328007/1‑150 (MQ=255)
                                                           cATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATa                                                                                           >  1:651503/1‑150 (MQ=255)
                                                            aTCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATAc                                                                                          <  2:713914/150‑1 (MQ=255)
                                                                ggggCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGt                                                                                      >  1:460376/1‑150 (MQ=255)
                                                                   gcagcaACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGTACa                                                                                   <  2:327448/150‑1 (MQ=255)
                                                                      gcaACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGTACAGGt                                                                                <  1:467144/150‑1 (MQ=255)
                                                                             ggCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGc                                                                                                                                   <  2:436673/92‑1 (MQ=255)
                                                                             ggCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGc                                                                                                                                   >  1:436673/1‑92 (MQ=255)
                                                                                     ccATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGTACAGGTTCACGTGCGCCTTGa                                                                 >  2:24256/1‑150 (MQ=255)
                                                                                      cATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAAt                                                                                                                             <  1:295841/89‑1 (MQ=255)
                                                                                      cATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAAt                                                                                                                             >  2:295841/1‑89 (MQ=255)
                                                                                      cATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGTACAGGTTCACGTGCGCCTTGaa                                                                <  1:859191/150‑1 (MQ=255)
                                                                                      cATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGTACAGGTTCACGTGCGCCTTGaa                                                                >  1:842041/1‑150 (MQ=255)
                                                                                      cATGCTCGAGTGGTCCGACAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGTACAGGTTCACGTGCGCCTTGaa                                                                >  2:596092/1‑150 (MQ=255)
                                                                                           tCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCAGGCCGAGGCCtggctggc                                                                                                                                   <  2:655376/78‑1 (MQ=25)
                                                                                           tCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCAGGCCGAGGCCtggctggc                                                                                                                                   >  1:655376/1‑78 (MQ=25)
                                                                                            cGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGTACAGGTTCACGTGCGCCTTGAACgtggt                                                          <  2:8624/150‑1 (MQ=255)
                                                                                               gtggtCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGTACAgg                                                                                 >  2:178097/1‑124 (MQ=255)
                                                                                               gtggtCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGTACAgg                                                                                 <  1:178097/124‑1 (MQ=255)
                                                                                                     ggCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCgg                                                                                               <  1:593855/104‑1 (MQ=255)
                                                                                                     ggCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCgg                                                                                               >  2:593855/1‑104 (MQ=255)
                                                                                                      gCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGTACAGGTTCACGTGCGCCTTGAACGTGGTGTCATTgcgc                                                <  2:380132/150‑1 (MQ=255)
                                                                                                          agcagGTAAGCCCGCCCCGCCAGCAAGCCTTCGATCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGTACAGGTTCACGTGCGCCTTGAACgtggt                                                          >  2:218704/1‑137 (MQ=255)
                                                                                                          agcagGTAAGCCCGCCCCGCCAGCAAGCCTTCGATCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGTACAGGTTCACGTGCGCCTTGAACgtggt                                                          <  1:218704/137‑1 (MQ=255)
                                                                                                               gTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTTGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGTACAGGTTCACGTGCGCCTTGAACGTGGTGTCATTGCGCGCAATCAg                                        >  1:468740/1‑150 (MQ=255)
                                                                                                                      cgccccgccAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGTACAGGTTCACGTGCGCCTTGAACGTGGTGTCATTGCGCGCAATCAGCGTTTCa                                 <  2:210718/150‑1 (MQ=255)
                                                                                                                       gccccgccAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGTACAGGTTCACGTGCGCCTTGAACGTGGTGTCATTGCGCGCAATCAGCGTTTCAg                                >  1:263567/1‑150 (MQ=255)
                                                                                                                          ccgccAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGTACAGGTTCACGTGCGCCTTGAACGTGGTGTCATTGCGCGCAATCAGCGTTTCAGCct                             >  1:1120613/1‑150 (MQ=255)
                                                                                                                                     ccTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGTACAGGTTCACGTGCGCCTTGAACGTGGTGTCATTGCGCGCAATCAGCGTTTCAGCCTGCTGCGCAGcc                  <  2:571503/150‑1 (MQ=255)
                                                                                                                                           attaccGCCAGCAGGCCGAGGCCTGGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGTACAGGTTCACGTGCGCCTTGAACGTGGTGTCATTGCGCGCAATCAGCGTTTCAGCCTGCTGCGCAGCCGCAggg            >  2:1155566/5‑150 (MQ=255)
                                                                                                                                            gCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGTACAGGTTCACGTGCGCCTTGAACGTGGTGTCATTGCGCGCAATCAGCGTTTCAGCCTGCTGCGCAGCCGCAGGGt           >  2:507644/1‑150 (MQ=255)
                                                                                                                                                 gccagccaGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGTACAGGTTCACGTGCGCCTTGAACGTGGTGTCATTGCGCGCAATCAGCGTTTCAGcc                              <  2:1029504/126‑1 (MQ=255)
                                                                                                                                                 gccagccaGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGTACAGGTTCACGTGCGCCTTGAACGTGGTGTCATTGCGCGCAATCAGCGTTTCAGcc                              >  1:1029504/1‑126 (MQ=255)
                                                                                                                                                     gccagGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGTACAGGTTCACGTGCGCCTTGAACGTGGTGTCATTGCGCGCAATCAGCGTTTCAGCCTGCTGCGCAGCCGCAGGGTTGGCCTGTa  >  1:303446/1‑150 (MQ=255)
                                                                                                                                                     gccagGCCTCGGCCTGCTGGCGGTAATGCTAGCGGGAATGCTCCGGGTAACGCTCGGCATACTTGTACAGGTTCACGTGCGCCTTGAAAGTGGTGTCATTGTGCGCCATCACCGTTTAAGCCTGCTGCGCAGCCGCAGGGTCGGCCTGTa  <  2:64421/150‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
CGCACACGCGGATAAGCCGCCTCGGCGAACCACTGCGGTTCGACCCCGGCAAACTGGCGCATCAGGGGCAGCAACGCGGCATCGGCCATGCTCGGGTGGTCGGCCAGCAGGTAAGCCCGCCCCGCCAGCAAGCCTTCGAGCTCCGCCAGCCAGGCCTCGGCCTGCTGGCGGTAATGCTCGCGGGAATGCTCCGGGTAACGTTCGGCATACTTGTACAGGTTCACGTGCGCCTTGAACGTGGTGTCATTGCGCGCAATCAGCGTTTCAGCCTGCTGCGCAGCCGCAGGGTTGGCCTGTA  >  NC_002947/2295988‑2296285

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: