| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,541,825 | Δ1 bp | 8.7% | coding (498/1503 nt) | nhaB → | Na(+)/H(+) antiporter NhaB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,541,825 | 0 | C | . | 8.7% | 205.1 / 15.8 | 69 | coding (498/1503 nt) | nhaB | Na(+)/H(+) antiporter NhaB |
| Reads supporting (aligned to +/- strand): ref base C (35/25); new base . (2/4); total (39/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.92e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.60e-01 | |||||||||||
TTCTCACGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGG > NC_002947/4541679‑4541974 | ttcTCACGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTaccac < 1:349683/150‑1 (MQ=255) tcACGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACcgc < 2:755335/150‑1 (MQ=255) aCGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACcgcgt > 1:880382/1‑150 (MQ=255) aCGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACcgcgt > 1:506791/1‑150 (MQ=255) aCGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACcgcgt > 1:261874/1‑150 (MQ=255) aCGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCGACGCGGTGGTA‑CACcgcgt > 2:643122/1‑150 (MQ=255) cGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTGCTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACcgcgtc < 2:753712/150‑1 (MQ=255) aTTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGGTA‑CACcgcgtagaa < 2:196497/150‑5 (MQ=255) aTTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCGACGCGGTGGTA‑CACcgcgtagaa < 1:643122/150‑5 (MQ=255) gggTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCa > 1:253979/1‑150 (MQ=255) ggTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGAACATTCGTGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCaa > 1:75218/1‑150 (MQ=255) aaGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGGTA‑CACcgcgtagaa < 2:1031397/129‑5 (MQ=255) aaGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAg > 1:807105/1‑150 (MQ=255) aaGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GGTACACcgcgtagaa > 1:1031397/1‑125 (MQ=255) gCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCAGCGCGAGGAc > 2:256855/1‑150 (MQ=255) ccATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GGTACACcgcgta > 2:401608/1‑121 (MQ=255) ccATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GGTACACcgcgta < 1:401608/122‑2 (MQ=255) cTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGAACGTCACAGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCa < 1:145739/150‑1 (MQ=255) gcgcTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTg < 1:818485/150‑1 (MQ=255) gcgcTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGACGCCGTGACCGTAACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTg < 1:865812/150‑1 (MQ=255) gctgctGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTNTCGATGNCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTggg > 1:823485/1‑149 (MQ=255) tgctgTTTTGCGTACTGTCGGCGTTTCTATCCGTGTTTCTCGATGCCATGACCGTCATGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCGCCGCGTCGCGTCCGGGGCAAATCCGCGCGAGGACAGCGGACTGgata < 2:51842/150‑3 (MQ=255) tgTTTAGCGGACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCg < 1:51769/150‑1 (MQ=255) gTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACGGCGCACTGGAGAGCGa > 1:546052/1‑150 (MQ=255) tGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTac > 2:1105399/1‑86 (MQ=255) tGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTac < 1:1105399/86‑1 (MQ=255) tGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAGTCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCg > 2:824317/1‑150 (MQ=255) tCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAg > 2:30749/1‑122 (MQ=255) tCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAg < 1:30749/122‑1 (MQ=255) tCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTTGAGAGCGACCAGCAAGTCGCt > 2:210447/1‑150 (MQ=255) tCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCt > 2:112854/1‑150 (MQ=255) cGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTc > 2:1144340/1‑150 (MQ=255) ggCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGa > 1:369654/1‑114 (MQ=255) ggCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGa < 2:369654/114‑1 (MQ=255) ggCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCAGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCa < 1:256855/150‑1 (MQ=255) gTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCt > 2:876019/1‑150 (MQ=255) gTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCt < 1:939919/150‑1 (MQ=255) tATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCAcc > 1:107790/1‑150 (MQ=255) gcgTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGACGCTCACCTGCACCGGGaa > 2:797219/1‑150 (MQ=255) cGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGa > 1:322282/1‑150 (MQ=255) gATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGAc < 1:112854/150‑1 (MQ=255) gATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGAc < 1:258620/150‑1 (MQ=255) aTGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGGCAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGAcc > 1:13000/1‑150 (MQ=255) aTGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGAcc > 2:715094/1‑150 (MQ=255) tGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCCCCGGGAAGACCTCGACCa < 2:75218/150‑1 (MQ=255) gCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAg < 2:107790/150‑1 (MQ=255) gTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGcc > 2:183351/1‑150 (MQ=255) tCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTcc > 1:840561/1‑144 (MQ=255) tCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTcc < 2:840561/144‑1 (MQ=255) cACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGAT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGga > 2:769505/1‑93 (MQ=255) cACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGAT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGga < 1:769505/93‑1 (MQ=255) gTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGc > 1:393932/1‑148 (MQ=255) gTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGc < 2:393932/148‑1 (MQ=255) atcaGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCctg > 2:765793/1‑150 (MQ=255) atcaGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCctg < 1:183351/150‑1 (MQ=255) tCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGTGAGCGAc > 2:483743/1‑74 (MQ=255) tCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGTGAGCGAc < 1:483743/74‑1 (MQ=255) ggCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCt < 1:1146170/150‑1 (MQ=255) gCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCtg > 2:430842/1‑150 (MQ=255) ttCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTc < 2:293146/102‑1 (MQ=255) ttCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTc > 1:293146/1‑102 (MQ=255) ttCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCt > 2:987345/1‑122 (MQ=255) ttCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCt < 1:987345/122‑1 (MQ=255) ttCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCtgtg > 1:18161/1‑150 (MQ=255) tCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTgg < 1:765793/150‑1 (MQ=255) gcgaCGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTgg > 1:102842/4‑150 (MQ=255) cTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCt < 2:1175126/99‑1 (MQ=255) cTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCt > 1:1175126/1‑99 (MQ=255) tACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGt > 2:835776/1‑150 (MQ=255) tACGAGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGt > 1:897171/1‑150 (MQ=255) gaCGCGGTGGTA‑CACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCctgc > 2:154223/2‑130 (MQ=255) gaCGCGGTGGTA‑CACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCctgc < 1:154223/129‑1 (MQ=255) ccaccGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGTTACCGCCCTggg > 2:1116230/1‑150 (MQ=255) ccaccGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTggg > 1:228493/1‑150 (MQ=255) | TTCTCACGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGG > NC_002947/4541679‑4541974 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |