| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 235,347:1 | +A | 7.7% | intergenic (+44/+81) | PP_0183 → / ← argH | glutathione S‑transferase/argininosuccinate lyase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 235,347 | 1 | . | A | 7.7% | 292.5 / 17.6 | 78 | intergenic (+44/+81) | PP_0183/argH | glutathione S‑transferase/argininosuccinate lyase |
| Reads supporting (aligned to +/- strand): ref base . (32/40); new base A (4/2); total (36/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCAC > NC_002947/235198‑235495 | gtgtggttaatgcgcgtgaccacattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGTc < 2:301306‑M1/17‑1 (MQ=255) tGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGtttt < 1:924605/150‑1 (MQ=255) ggggAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGTAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGaaa < 1:687606/150‑1 (MQ=255) ggggAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGaaa < 1:310395/150‑1 (MQ=255) ggAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACt < 2:361147/150‑1 (MQ=255) cacattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGTAATGCACCGTTTTTGAAACtt > 2:630540‑M1/114‑150 (MQ=255) cacattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGTAATGCACCGTTTTTGAAACtt > 2:613380‑M1/114‑150 (MQ=255) agaACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTtg > 2:1101335/1‑150 (MQ=255) gaACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTT‑TGCACCGTTTTTGAAACTtgt > 1:1024371/1‑150 (MQ=255) gaACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTtgt < 2:210623/150‑1 (MQ=255) ccGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCTGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCAt > 1:1037436/1‑150 (MQ=255) cacaTGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCTGGCATGCCCGCTCCCACAGGTC‑TTCACCGTTTTTGAAACTTGTGCATTAc < 1:284871/150‑1 (MQ=255) gCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCtgtg < 2:696080/150‑1 (MQ=255) gCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCtgtg < 1:1101335/150‑1 (MQ=255) ggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcatGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTgg < 2:869227‑M1/51‑1 (MQ=255) ggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcatGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTgg > 1:869227‑M1/100‑150 (MQ=255) gcgGATCTTGGCGTACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGaaa > 2:1127655/1‑130 (MQ=255) gcgGATCTTGGCGTACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGaaa < 1:1127655/130‑1 (MQ=255) gcgGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCa < 2:166470/118‑1 (MQ=255) gcgGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCa > 1:166470/1‑118 (MQ=255) aggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCAtt < 1:985176‑M1/43‑1 (MQ=255) aggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCAtt > 2:985176‑M1/89‑131 (MQ=255) gCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGc > 2:595943/1‑150 (MQ=255) tgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcatGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTg < 2:994215‑M1/62‑1 (MQ=255) tgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcatGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTg > 1:994215‑M1/86‑147 (MQ=255) aaGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGATGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACAGCTTTTGAAACTTGTGGATTACCTGTGGGAGCGGGCGTGCCCGGGa > 2:1179439/1‑150 (MQ=38) aGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGaa > 1:594514/1‑150 (MQ=255) ggAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAAc > 2:1146003/1‑150 (MQ=255) gCGTCGATGCCGACCTACACAGCGATGTACCGGATTGCCTAGCGCGAAGTTTTTTGTTTAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAgg < 2:1037436/150‑1 (MQ=21) ggcgttcgtggcaaggccctgttggcgtctcgctaatcccccaagtcgaggccttcgccctcgttcgcgggcacGCCCGCTCCCACATGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAggg > 1:301306‑M1/75‑150 (MQ=255) cGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAggg > 1:934263/1‑150 (MQ=255) tCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCg < 1:911305/150‑1 (MQ=255) gATGCCGGCCTTCAGGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTCTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGaa < 1:1179439/150‑1 (MQ=255) tcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcatGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTAc < 1:809187‑M1/45‑1 (MQ=255) tcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcatGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTAc > 2:809187‑M1/70‑114 (MQ=255) tGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTGCGCGGGCATGCTTGCTCCCACAGGTC‑TACACCGTTTTTGAAACTTGTGCAGTACCTGTTGGGGCGGGCGTGCCCGCGAACGAGGGCGAAGc > 1:421777/1‑150 (MQ=255) cGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCt > 1:1149681/1‑150 (MQ=255) cGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCACCAGCCGATAGTTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGGGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCt < 2:585883/150‑1 (MQ=255) aTGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTgg < 1:1146003/150‑1 (MQ=255) aTGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTgg > 1:147322/1‑150 (MQ=255) aTGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTgg < 1:175972/150‑1 (MQ=255) tGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTCGGAGCCGGCGTGCACGCGAACGAGGGCGAAGCCCTCGCCTTggg < 1:214355/150‑1 (MQ=255) gatCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGGTTAg > 1:898349/1‑150 (MQ=255) tCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCg < 2:931450/150‑1 (MQ=255) tcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTAc < 2:485672‑M1/45‑1 (MQ=255) tcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTAc > 1:485672‑M1/46‑90 (MQ=255) gCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTc > 1:202496/1‑61 (MQ=255) gCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTc < 2:202496/61‑1 (MQ=255) gCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCACTTCTCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGGAGGTGGAACTTGTGATGAATTTGTTGGGGCGTGCGTGCCCGCGAACGAGGGCGAAGACCTCGCCTTGGAGGTTTAGCgaga > 1:990549/1‑150 (MQ=255) gctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGTAATGCACCGTTTTTGAAACtt > 2:567412‑M1/44‑80 (MQ=255) gctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGTAATGCACCGTTTTTGAAACtt < 1:567412‑M1/37‑1 (MQ=255) gCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTTCTACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGc < 1:265620/150‑1 (MQ=255) ggCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCa < 2:1049100/150‑1 (MQ=255) atcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGTAATGCACCGTTTTTGAAACtt > 2:507508‑M1/40‑76 (MQ=255) atcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGTAATGCACCGTTTTTGAAACtt < 1:507508‑M1/37‑1 (MQ=255) gCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCga < 2:561434/142‑1 (MQ=255) gCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCga > 1:561434/1‑142 (MQ=255) cTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGATGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGcc < 1:595943/150‑1 (MQ=255) cTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGc > 2:225762/1‑133 (MQ=255) cTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGc < 1:225762/133‑1 (MQ=255) tCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGcc > 2:820791/1‑150 (MQ=255) cTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCa < 1:434718/150‑1 (MQ=255) tgtTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCacgaa < 2:934263/150‑1 (MQ=255) ttGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGcc < 2:244403/143‑1 (MQ=255) ttGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGcc > 1:244403/1‑143 (MQ=255) gAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAacgac < 2:147322/150‑1 (MQ=255) aGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAacgacg > 2:664979/1‑150 (MQ=255) tCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGgcagca < 2:921457/150‑1 (MQ=255) aTGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTg > 2:179716/1‑150 (MQ=255) aTGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTg > 2:154832/1‑150 (MQ=255) CCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGCGGGCCAACGCTGGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTgcgc < 2:296413‑M1/150‑1 (MQ=255) CGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTgcgccg < 1:1050329‑M1/150‑1 (MQ=255) CCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTgg > 2:267121‑M1/1‑85 (MQ=255) CCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTgg < 1:267121‑M1/85‑1 (MQ=255) CCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGcc < 2:480058‑M1/111‑1 (MQ=255) CCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGcc > 1:480058‑M1/1‑111 (MQ=255) CCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTgcgccggcgcc < 1:540041‑M1/150‑1 (MQ=255) CACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTgcgccggcgccg < 1:482990‑M1/150‑1 (MQ=255) AGGTT‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTac > 2:1024371‑M1/1‑150 (MQ=255) GGTC‑TGCACCGTTTTTGATACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTacc > 1:664979‑M1/1‑150 (MQ=255) TC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTaccac < 2:847392‑M1/150‑1 (MQ=255) | GTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTC‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCAC > NC_002947/235198‑235495 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |