New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 174139 =NA (NA)4 (0.090) 4/240 NT NA noncoding (937/2902 nt) PP_23SA 23S ribosomal RNA
?NC_002947 174165 = NA (NA)noncoding (963/2902 nt) PP_23SA 23S ribosomal RNA

TTACGCTTTCTTTAAAGGGTGGCTGCTTCTAAGCCAACCTCCTAGCTGTCTAAGCCTTCCCACATCGTTTCCCACTTAACCATGACTTTGGGACCTTAGCTGACGGTCTGGGTTGTTTCCCTTTTCACGACGGACGTTAGCACCCGCCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/174289‑174139
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgAAAAGGGAAACAACCCAGACCGTCAGCTAAGGTCCCAAAGTCATGGTTAAGTGGGAAACGATGTGGGAAGGCTTAGACAGCTAGGAGGTTGGCTTAGAAGCAGCCACCCTTTAAAGAAAGCGTAATAGCTCACTAGTCGAGTCGGCCTG  >  NC_002947/174165‑174313
                                                                                                                                                                                                                                                                                                            
TTACGCTTTCTTTAAAGGGTGGCTGCTTCTAAGCCAACCTCCTAGCTGTCTAAGCCTTCCCACATCGTTTCCCACTTAACCATGACTTTGGGACCTTAGCTGACGGTCTGGGTTGTTTCCCTTTTCACGACGGACGTTAGCACCCGCCGT                                                                                                                                                        >  2:1115502/1‑150
 TACGCTTTCTTTAAAGGGTGGCTGCTTCTAAGCCAACCTCCTAGCTGTCTAAGCCTTCCCACATCGTTTCCCACTTAACCATGACTTTGGGACCTTAGCTGACGGTCTGGGTTGTTTCCCTTTTCACGACGGACGTTAGCACCCGCCGTG                                                                                                                                                       >  1:971128/1‑150
                                GCCAACCTCCTAGCTGTCTAAGCCTTCCCACATCGTTTCCCACTTAACCATGACTTTGGGACCTTAGCTGACGGTCTGGGTTGTTTCCCTTTTCACGACGGACGTTAGCACCCGCCGT                                                                                                                                                        >  1:685173/1‑118
                                GCCAACCTCCTAGCTGTCTAAGCCTTCCCACATCGTTTCCCACTTAACCATGACTTTGGGACCTTAGCTGACGGTCTGGGTTGTTTCCCTTTTCACGACGGACGTTAGCACCCGCCGT                                                                                                                                                        <  2:685173/118‑1
                                                                                                                    TTCCCTTTTCACGACGGACGTTAGCACCCGCCGTGAAAAGGGAAACAACCCAGACCGTCAGCTAAGGTCCCAAAGTCATGGTTAAGTGGGAAACGATGTGGGAAGGCTTAGACAGCTAGGAGG                                                               >  1:889076/1‑123
                                                                                                                    TTCCCTTTTCACGACGGACGTTAGCACCCGCCGTGAAAAGGGAAACAACCCAGACCGTCAGCTAAGGTCCCAAAGTCATGGTTAAGTGGGAAACGATGTGGGAAGGCTTAGACAGCTAGGAGG                                                               <  2:889076/123‑1
                                                                                                                     TCCCTTTTCACGACGGACGTTAGCACCCGCCGTGAAAAGGGAAACAACCCAGACCGTCAGCTAAGGTCCCAAAGTCATGGTTAAGTGGGAAACGATGTGGGAAGGCTTA                                                                            <  1:800834/109‑1
                                                                                                                     TCCCTTTTCACGACGGACGTTAGCACCCGCCGTGAAAAGGGAAACAACCCAGACCGTCAGCTAAGGTCCCAAAGTCATGGTTAAGTGGGAAACGATGTGGGAAGGCTTA                                                                            >  2:800834/1‑109
                                                                                                                                                   CGTGAAAAGGGAAACAACCCAGACCGTCAGCTAAGGTCCCAAAGTCATGGTTAAGTGGGAAACGATGTGGGAAGGCTTAGACAGCTAGGAGGTTGGCTTAGAAGCAGCCACCCTTTAAAGAAAGCGTAATAGCTCACTAGTCGAGTCGGC     <  1:197680/150‑1
                                                                                                                                                     TGAAAAGGGAAACAACCCAGACCGTCAGCTAAGGTCCCAAAGTCATGGTTAAGTGGGAAACGATGTGGGAAGGCTTAGACAGCTAGGAGGTTGGCTTAGAAGCAGCCACCCTTTAAAGAAAGCGTAATAGCTCACTAGTCGAGTCGGCCT   <  1:285791/150‑1
                                                                                                                                                      GAAAAGGGAAACAACCCAGACCGTCAGCTAAGGTCCCAAAGTCATGGTTGAAAGTTAAACGATGTGGGAAGGCTTAGACAGCTAGGAGGTTGGCTTAGAAGCAGCCACCCTTTAAAGAAAGCGTAATAGCTCACTAGTCGAGTCGGCCTG  >  1:634307/1‑150
                                                                                                                                                      GAAAAGGGAAACAACCCAGACCGTCAGCTAAGGTCCCAAAGTCATGGTTAAGTGGGAAACGATGTGGGAAGGCTTAGACAGCTAGGAGGTTGGCTTAGAAGCAGCCACCCTTTAAAGAAAGCGTAATAGCTCACTAGTCGAGTCGGCCTG  >  1:602143/1‑150
                                                                                                                                                      GAAAAGGGAAACAACCCAGACCGTCAGCTAAGGTCCCAAAGTCATGGTTAAGTGGGAAACGATGTGGGAAGGCTTAGACAGCTAGGAGGTTGGCTTAGAAGCAGCCACCCTTTAAAGAAA                                >  1:66473/1‑120
                                                                                                                                                      GAAAAGGGAAACAACCCAGACCGTCAGCTAAGGTCCCAAAGTCATGGTTAAGTGGGAAACGATGTGGGAAGGCTTAGACAGCTAGGAGGTTGGCTTAGAAGCAGCCACCCTTTAAAGAAA                                <  2:66473/120‑1
                                                                                                                                                                                                                                                                                                            
TTACGCTTTCTTTAAAGGGTGGCTGCTTCTAAGCCAACCTCCTAGCTGTCTAAGCCTTCCCACATCGTTTCCCACTTAACCATGACTTTGGGACCTTAGCTGACGGTCTGGGTTGTTTCCCTTTTCACGACGGACGTTAGCACCCGCCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/174289‑174139
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgAAAAGGGAAACAACCCAGACCGTCAGCTAAGGTCCCAAAGTCATGGTTAAGTGGGAAACGATGTGGGAAGGCTTAGACAGCTAGGAGGTTGGCTTAGAAGCAGCCACCCTTTAAAGAAAGCGTAATAGCTCACTAGTCGAGTCGGCCTG  >  NC_002947/174165‑174313

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.