| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 195962 | 88 (1.950) | 9 (0.200) | 6/246 | NT | 10.8% | coding (1468/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | NC_002947 | = 197443 | 62 (1.390) | coding (2949/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
AGAGCGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/195849‑195962‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGCGTCGGGTTCGGGGTCAGCTGTTCGAAGTTGCCGCCGGTGGCGTTCTCGATGGTGACGCTGACGGTCGAACCGTTGTTGTAG < NC_002947/197443‑197314 AGAGCGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGGGTCGCG < 1:201825/121‑1AGAGCGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGGGTCGCG > 2:201825/1‑121 ACCACCGCGACCCTGACGGCGAGCCCGTCGGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGCGTCGGGTTCGGGGTCAGCTGTTCGAAGTTGCCGCCGGTG < 1:1140655/119‑1 ACCACCGCGACCCTGACGGCGAGCCCGTCGGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGCGTCGGGTTCGGGGTCAGCTGTTCGAAGTTGCCGCCGGTG > 2:1140655/1‑119 CCACCGCGACCCTGACGGCGAGCCCGTCAGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGCGTCGGGTTCGGGGTCAGCTGT > 1:50813/1‑100 CCACCGCGACCCTGACGGCGAGCCCGTCAGGGTCGCGGTGGTGGCATCGACAGAGTCGTTGATCGTGGTCTGAGCCGGCGTCGGGTTCGGGGTCAGCTGT < 2:50813/100‑1 GCGACCCTGACGGCGAGCCCGTCGGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGTCGGATTCGGGGTCA < 1:174190/90‑1 GCGACCCTGACGGCGAGCCCGTCGGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGGGTCGGATTCGGGGTCA > 2:174190/1‑90 CCTGACGGCGAGCCCGTCGGGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGCGTCGGGTTCGGGGTCAGCTGTTCGAAGTTGCCGCCAGTGGCGTTCTCGATGGTGACGCTGACGGTCGAACCGTTGTTGTAG > 1:34484/1‑150 AGAGCGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/195849‑195962‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGGTCGCGGTGGTGGCATCGACCGAGTCGTTGATCGTGGTCTGAGCCGGCGTCGGGTTCGGGGTCAGCTGTTCGAAGTTGCCGCCGGTGGCGTTCTCGATGGTGACGCTGACGGTCGAACCGTTGTTGTAG < NC_002947/197443‑197314 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |