New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	647234 =	53 (1.170)	6 (0.140)	6/232	NT	11.7%	coding (854/1854 nt)	acoR	acetoin catabolism regulatory protein
	?	NC_002947	647262 =	41 (0.970)					coding (882/1854 nt)	acoR	acetoin catabolism regulatory protein

GCACCGCCAGGTTGCAGTCCTTGACCCGCGTGGCCAACCGCAGGTGTTGCTCGATACGGGTGTCCTGGGCCTGGCGCAAAGGCTGCGCACGCTGGCGTTGCTGCGGTGCGCTGACCCGGCCATACAAACCGCCCAG‑ACCAGGCAGGCGCTGGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/647389‑647234 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggcggTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAACACCTGCGGTTGGCCACGCGGGTCAAGGACTGCAACCTGGCGGTGCTGGTACTGGGTGAGACCGGG  >  NC_002947/647262‑647409                                                                                                                                                                                                                                                                                                                   GCACCGCCAGGTTGCAGTCCTTGACCCGCGTGGCCAACCGCAGGTGTTGCTCGATACGGGTGTCCTGCGCCTGGCGCAAAGGCTGCGCACGCTGGCGTTGCTGCGGTGCGCTGACCCGGCCATACAAACCGCCCAG‑ACCAGGCAGGCGCT                                                                                                                                                            >  2:233258/1‑150    CCGCCAGGTTGCAGTCCTTGACCCGCGTGGCCAACCGCAGGTGTTGCTCGATACGGGTGTCCTGGGCCTGGCGCAAAGGCTGCGCACGCTGGCGTTGCTGCGGTGCGCTGACCCGGCCATACAAACCGCCCAG‑ACCAGGCAGGCGCTGGG                                                                                                                                                         <  2:1197274/150‑1                                                   TCGATACGGGTGTCCTGGGCCTGGCGCAAAGGCTGCGCACGCTGGCGTTGCTGCGGTGCGCTGACCCGGCCATACAAACCGCCCAGCGCCTGCCTGG‑TCTGGGCGGTTTGTATGGCC                                                                                                                                           <  1:755292/117‑1                                                   TCGATACGGGTGTCCTGGGCCTGGCGCAAAGGCTGCGCACGCTGGCGTTGCTGCGGTGCGCTGACCCGGCCATACAAACCGCCCAGCGCCTGCCTGG‑TCTGGGCGGTTTGTATGGCC                                                                                                                                           >  2:755292/1‑117                                                                                                                          ATACAAACCGCCCAG‑ACCAGGCAGGCGCTGGGCGGTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAACGCCTGCGGTTG                                                        <  2:465087/129‑1                                                                                                                          ATACAAACCGCCCAG‑ACCAGGCAGGCGCTGGGCGGTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAACACCTGCGGTTG                                                        >  1:465087/1‑129                                                                                                                           TACAAACCGCCCAG‑ACCAGGCAGGCGCTGGGCGGTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAACACCTGCGGTTGGCCACGCGGGTCAAGGACTGCA                                  >  2:1144756/1‑150                                                                                                                              AAACCGCCCAG‑ACCAGGCAGGCGCTGGGCGGTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAACACCTGCGGTTGGCCACGCGGGTCAAGGACTGCAACC                               >  2:660895/1‑150                                                                                                                                                     GCTGGGCGGTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAACACCTGCGGTTGGCCACGCGGGTCAAGGACTGCAACCTGGCGGTGCTGGTACTGGGTGA         <  1:660895/150‑1                                                                                                                                                     GCTGGGCGGTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAACACCTGCGGTTGGCCACGCGGGTCAAGGACTGCAACCTGGCGGTGCTGGTACTGGGTGA         <  2:1062865/150‑1                                                                                                                                                        GGGCGGTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAACACCTGCGGTTGG                                                       <  1:785315/101‑1                                                                                                                                                        GGGCGGTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAACACCTGCGGTTGG                                                       >  2:785315/1‑101                                                                                                                                                         GGCGGTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAAC                                                                   <  1:852137/88‑1                                                                                                                                                         GGCGGTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAAC                                                                   >  2:852137/1‑88                                                                                                                                                            GGTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAACACCTGCGGTTGGCCACGCGGGTCAAGGACTGCAACCTGGCGGTGCTGGTACTGGGTGCGACCGag  <  2:351365/150‑3                                                                                                                                                            GGTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAACACCTGCGGTTGGCCACGCGGGTCAAGGACTGCAACCTGGCGGTGCTGGTACTGGGTGAGACCGGG  <  2:420777/150‑1                                                                                                                                                                                                                                                                                                                   GCACCGCCAGGTTGCAGTCCTTGACCCGCGTGGCCAACCGCAGGTGTTGCTCGATACGGGTGTCCTGGGCCTGGCGCAAAGGCTGCGCACGCTGGCGTTGCTGCGGTGCGCTGACCCGGCCATACAAACCGCCCAG‑ACCAGGCAGGCGCTGGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/647389‑647234 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggcggTTTGTATGGCCGGGTCAGCGCACCGCAGCAACGCCAGCGTGCGCAGCCTTTGCGCCAGGCCCAGGACACCCGTATCGAGCAACACCTGCGGTTGGCCACGCGGGTCAAGGACTGCAACCTGGCGGTGCTGGTACTGGGTGAGACCGGG  >  NC_002947/647262‑647409

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.