New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	675401 =	65 (1.440)	3 (0.070)	3/226	NT	5.2%	coding (301/696 nt)	PP_0577	hypothetical protein
	?	NC_002947	675451 =	51 (1.240)					coding (251/696 nt)	PP_0577	hypothetical protein

CGCCCGTTACCACCGGCCCCCGCCCAGGCGGCCACCACCTTCGACGCCAGTGCTTACCCTGCGCCCGCTCGTGATTATGGGCACTACCGCAGCTGGAGCTGGCGCAACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCC‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/675557‑675401 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaactggcc‑gTTGCGCCAGCTCCAGCTGCGGTAGTGCCCATAATCACGAGCGGGCGCAGGGTAAGCACTGGCGTCGAAGGTGGTGGCCGCCTGGGCGGGGGCCGGTGGTAACGGGCGGCTGCTGGCCACATACGGGTTGCTGCCCTGGCAGCCAGC  >  NC_002947/675451‑675596                                                                                                                                                                                                                                                                                                                  CGCCCGTTACCACCGGCCCCCGCCCAGGCGGCCACCACCTTCGACGCCAGTGCTTACCCTGCGCCCGCTCGTGATTATGGGCACTACCGCAGCTGGAGCTGGCGCAACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAt                                                                                                                                                            <  1:475957/150‑2     CGTTCCCACCGGCCCCCGCCCAGGCGGCCACCTCCTTCGACGCCAGTGCTTACCCTGCGCCCGCTCGTGATTATAGGCACTACCGCAGCTGGAGCTGGCGCAACGTCCAGGTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGG                                                                                                                                                        <  1:1038692/150‑1     CGTTACCCCCGGCCCCCGCCCAGGCGGCCACCACCTTCGACGCCAGTGCTTACCCTGCGCCCGCTCGTGATGCTCGGCACTACCGCAGCTGGAGCTGGCGCAACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGCCCCGGCGCCACTGG                                                                                                                                                        >  2:1130253/1‑150      GTTACCACCGGCCCCCGCCCAGGCGGCCACCACCTTCGACGCCAGTGCTTACCCTGCGCCCGCTCGTGATTATGGGCACTACCGCAGCTGGAGCTGGCGCAACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGC                                                                                                                                                       <  2:1139722/150‑1                                                        ACCCTGCGCCCGCTCGTGATTATGGGCACTACCGCAGCTGGAGCTGGCGCAACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTG                                                                                                                                                         <  1:495986/98‑1                                                        ACCCTGCGCCCGCTCGTGATTATGGGCACTACCGCAGCTGGAGCTGGCGCAACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTG                                                                                                                                                         >  2:495986/1‑98                                                                                                            CGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCC‑GTTGCGCCAGCTCCAGCTGCGGTAGTGCCCATAATCACGAGCGGGCGCAGGGTAAGCACTGGCGTCGAAGGTGGTGGCCGCCTGGGCGGGGGCCGGTGGTA                                                >  2:981870/1‑150                                                                                                              GCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCC‑GTTGCGCCAGCTCCAGCTGCGGTAGTGCCCATAATCACGAGCGGGCGCAGGGTAAGCACTGGCGTCGAAGGTGGTGGCCGCCTGGGCGGG                                                           <  1:894414/137‑1                                                                                                              GCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCC‑GTTGCGCCAGCTCCAGCTGCGGTAGTGCCCATAATCACGAGCGGGCGCAGGGTAAGCACTGGCGTCGAAGGTGGTGGCCGCCTGGGCGGG                                                           >  2:894414/1‑137                                                                                                                                         tggagctGGCGCAAC‑GGCCAGTTGC‑CCAGCTCCAGCTGCGGTAGTGCCCATAATCACGAGCGGGCGCAGGGTAAGCACTGGCGTCGAAGGTGGTGGCCGCCTGGGCGGGGGCCGGTGGTAACGGGCGGCTGCTGGCCACATACGGGTTGC                  >  2:471425/8‑150                                                                                                                                                        TGGCC‑GTTGCGCCAGCTCCAGCTGCGGTAGTGCCCATAATCACGAGCGGGCGCAGGGTAAGCACTGGCGTCGAAGGTGGTGGCCGCCTGGGCGGGGGCCGGTGGTAACGGGCGGCTGCTGGCCACATACGGGTTGCTGCCCTGGCAGCCA    <  2:1169399/150‑1                                                                                                                                                        TGGCC‑GTTGCGCCAGCGCCAGCTGCGGTAGTGCCCATACTCACGAGCGGGCGCAGGGTAAGCACTGGCGTCGAAGGTGGTGGCCGCCTGGGGGGGGGCCGGTGGTAACGGGCGGCTGCTGGCCACCTACGGGTTGCTGCCCTGGCAGCCA    >  2:624639/1‑150                                                                                                                                                          GCC‑GTTGCGCCAGCTCCAGCTGCGGTAGTGCCCATAATCACGAGCGGGCGCAGGGTAAGCACTGGCGTCGAAGGTGGTGGCCGCCTGGGCGGGGGCCGGTGGTAACGGGCGGCTGCTGGCCACATACGGGTTGCTGCCCTGGCAGCCAGC  >  1:93415/1‑150                                                                                                                                                                                                                                                                                                                  CGCCCGTTACCACCGGCCCCCGCCCAGGCGGCCACCACCTTCGACGCCAGTGCTTACCCTGCGCCCGCTCGTGATTATGGGCACTACCGCAGCTGGAGCTGGCGCAACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCC‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/675557‑675401 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaactggcc‑gTTGCGCCAGCTCCAGCTGCGGTAGTGCCCATAATCACGAGCGGGCGCAGGGTAAGCACTGGCGTCGAAGGTGGTGGCCGCCTGGGCGGGGGCCGGTGGTAACGGGCGGCTGCTGGCCACATACGGGTTGCTGCCCTGGCAGCCAGC  >  NC_002947/675451‑675596

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.