| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 874287 = | 60 (1.330) | 3 (0.080) | 3/204 | NT | 6.4% | intergenic (+21/‑138) | PP_0758/PP_0759 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 874351 = | 39 (1.050) | intergenic (+85/‑74) | PP_0758/PP_0759 | hypothetical protein/hypothetical protein | |||||
GCATGAAAACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGCTTGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/874449‑874287‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taggagcgggcttgcccgcgaaGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCT > NC_002947/874351‑874492 GCATGAAAACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGG > 1:700942/1‑150GCATGAAAACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGG < 2:1015356/150‑1 ATGAAAACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGC > 1:305165/1‑150 aAAAACCCTCCCTAGCCACATGCGCCGTATCCTATGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGCTT < 2:653895/149‑1 AACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTA > 1:320250/1‑136 AACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTA < 2:320250/136‑1 cCTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGCTTGCCCGC < 1:708651/149‑1 ACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGCTTGCCCGC > 2:517581/1‑150 TCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGCTTGCCCGCGA > 1:1100771/1‑150 TCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGCTTGCCCGCGA > 2:40128/1‑150 CCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCG < 2:753077/115‑1 CCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCG > 1:753077/1‑115 ATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGCTT < 1:1189002/79‑1 ATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGCTT > 2:1189002/1‑79 AAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTC > 2:887766/1‑150 CCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAG > 2:153033/1‑115 CCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAG < 1:153033/115‑1 AGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTG > 2:500451/1‑150 GGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGC > 2:34642/1‑150 GAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCT > 2:611117/1‑150 GCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGG > 1:551617/1‑150 GCGGGCGTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCCGG < 1:1205253/150‑1 CCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCT < 2:551617/150‑1 CCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTG < 2:1061975/139‑1 CCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTG > 1:1061975/1‑139 GCATGAAAACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGCTTGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/874449‑874287‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taggagcgggcttgcccgcgaaGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCT > NC_002947/874351‑874492 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |