New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1176666 = | 61 (1.350) | 4 (0.090) | 4/240 | NT | 6.8% | coding (1091/1470 nt) | guaB | IMP dehydrogenase and single strand DNA binding factor |
? | NC_002947 | 1176687 = | 50 (1.140) | coding (1112/1470 nt) | guaB | IMP dehydrogenase and single strand DNA binding factor |
AGCTTCTCGGCGCCGGCCGAGGAGTCCTGGAAGTAACGGTCGGACGAACCCTGCGCCTGCGCCATGGCGCCCAGCGAGCCCATGCCGCGGTAGGCCTTGTAGGAACGGCCCTGGAACAGCTCGACTTCACCCGGGGCCTCTTCGGTACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1176816‑1176666 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggGTGAAGTCGAGCTGTTCCAGGGCCGTTCCTACAAGGCCTACCGCGGCATGGGCTCGCTGGGCGCCATGGCGCAGGCGCAGGGTTCGTCCGACCGTTACTTCCAGGACTCCTCGGCCGGCGCCGAGAAGCTGGTACCGGAAGGCATC > NC_002947/1176687‑1176832 AGCTTCTCGGCGCCGGCCGAGGAGTCCTGGAAGTAACGGTCGGACGAACCCTGCGCCTGCGCCATGGCGCCCAGCGAGCCCATGCCGCGGTAGGCCTTGTAGGAACGGCCCTGGAACAGCTCGCCTTCACCCGGGGCCTCTTCGGTACCG > 2:509796/1‑150 GTCCTGGAAGTAACGGTCGGACGAACCCTGCGCCTGCGCCATGGCGCCCAGCGAGCCCGTGCCGCGGTAGGCCTTGTAGGAACGGCCCTGGAACAGCTCGACTTCACCCGGGGCCTCTTCGGTACC > 1:706105/1‑126 GTCCTGGAAGTAACGGTCGGACGAACCCTGCGCCTGCGCCATGGCGCCCAGCGAGCCCGTGCCGCGGTAGGCCTTGTAGGAACGGCCCTGGAACAGCTCGACTTCACCCGGGGCCTCTTCGGTACC < 2:706105/126‑1 TTCACCCGGGGCCTCTTCGGTACCGGGTGAAGTCGAGCTGTTCCAGGGCCGTTCCTACAAGGCCTACCGCGGCATGGGCTCGCTG < 1:127201/85‑1 TTCACCCGGGGCCTCTTCGGTACCGGGTGAAGTCGAGCTGTTCCAGGGCCGTTCCTACAAGGCCTACCGCGGCATGGGCTCGCTG > 2:127201/1‑85 CCGGGGCCTCTTCGGTACCGGGTGAAGTCGAGCTGTTCCAGGGCCGTTCCTACAAGGCCTACCGCG > 1:936592/1‑66 CCGGGGCCTCTTCGGTACCGGGTGAAGTCGAGCTGTTCCAGGGCCGTTCCTACAAGGCCTACCGCG < 2:936592/66‑1 CCGGGTGAAGTCGAGCTGTTCCAGGGCCGTTCCTACAAGGCCTACCGCGGCATGGGCTCGCTGGGCGCCATGGCGCAGGCGCAGGGTTCGTCCGACCGTTACTTCCAGGACTCCTCGGCCGGCGCCGAGAAGCTGGTACCGGAAGGCATC > 1:545153/1‑150 CCGGGTGAAGTCGAGCTGTTCCAGGGCCGTTCCTACAAGGCCTACCGCGGCATGGGCTCGCTGGGCGCCATGGCGCAGGCGCAGGGTTCGTCCGACCGTTACTTCCAGGACTCCTCGGCCGGCGCCGAGAAGCTGGTACCGGAAGGCATC < 2:987789/150‑1 AGCTTCTCGGCGCCGGCCGAGGAGTCCTGGAAGTAACGGTCGGACGAACCCTGCGCCTGCGCCATGGCGCCCAGCGAGCCCATGCCGCGGTAGGCCTTGTAGGAACGGCCCTGGAACAGCTCGACTTCACCCGGGGCCTCTTCGGTACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1176816‑1176666 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggGTGAAGTCGAGCTGTTCCAGGGCCGTTCCTACAAGGCCTACCGCGGCATGGGCTCGCTGGGCGCCATGGCGCAGGCGCAGGGTTCGTCCGACCGTTACTTCCAGGACTCCTCGGCCGGCGCCGAGAAGCTGGTACCGGAAGGCATC > NC_002947/1176687‑1176832 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |