New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1330943 = | NA (NA) | 3 (0.070) | 3/238 | NT | NA | coding (162/1644 nt) | PP_1157 | acetolactate synthase |
? | NC_002947 | 1330987 = | NA (NA) | coding (206/1644 nt) | PP_1157 | acetolactate synthase |
TTCTTGATCGGCTTCTGCCCGGTGATCATCATCATCGGCATGCCGCCCAGGTAGGCGTAGGCGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAGGGTCGACAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1331092‑1330943 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATCAAGAAGTCCAAGCAGGGTCGCTTCCAGATCATTGACGTGTGCGGCAT > NC_002947/1330987‑1331134 TTCTTGATCGGCTTCTGCCCGGTGATCATCATCATCGGCATGCCGCCCAGGTAGGCGTAGGCGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAGGGTCGACAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCC > 1:503931/1‑150 TTCTTGATCGGCTTCTGCCCGGTGATCATCATCATCGGCATGCCGCCCAGGTAGGCGTAGGCGCTGGCGGTCACCAGGTTGGTGACACCAGGGCCGAGGGTCGACAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCC > 2:37612/1‑150 CGACAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCCTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGAcc > 1:41011/1‑148 GCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCCTGTCGACCCTCGTCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGC < 1:632473/105‑1 GCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCCTGTCGACCCTCGTCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGC > 2:632473/1‑105 GCCTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATCAAGAAGTCCAAGCAGGGTCGCTTCCAGATCATTGACGTGTGCGGCA < 1:64770/150‑1 CCTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATCAAGAAGTCCAAGCAGGGTCGCTTCCAGATCATTGACGTGTGCGGCAT < 1:5175/150‑1 TTCTTGATCGGCTTCTGCCCGGTGATCATCATCATCGGCATGCCGCCCAGGTAGGCGTAGGCGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAGGGTCGACAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1331092‑1330943 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATCAAGAAGTCCAAGCAGGGTCGCTTCCAGATCATTGACGTGTGCGGCAT > NC_002947/1330987‑1331134 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |