New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1473183 = | 55 (1.220) | 4 (0.090) | 3/236 | NT | 7.1% | coding (1045/1317 nt) | algD | GDP‑mannose 6‑dehydrogenase |
? | NC_002947 | 1473227 = | 52 (1.210) | coding (1001/1317 nt) | algD | GDP‑mannose 6‑dehydrogenase |
GAATCGCAGGTGCAGAACGCCTTCGAGCTGATCGAAGCCCACGACAAGCGCAAGGTCGCCCTGCTGGGCCTGAGCTTCAAGGCCGGCACCGACGACCTGCGCGAAAGCCCGCTGGTGGAACTGGCCGAGCGCCTGATCGGCAAGGGCTACCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1473336‑1473183 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accagcGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGCGATTCGTTGCTGCGCATCAGCGAGTCGAGCAGCGGTGCA > NC_002947/1473227‑1473370 GAATCGCAGGTGCAGAACGCCTTCGAGCTGATCGAAGCCCACGACAAGCGCAAGGTCGCCCTGCTGGGCCTGAGCTTCAAGGCCGGCACCGACGACCTGCGCGAAAGCCCGCTGGTGGAACTGGCCGAGCGCCTGATCGGCAAGGGCTAC > 2:226438/1‑150 GCTGGTGGAACTGGCCGAGCGCCTGATCGGCAAGGGCTACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGCG > 1:153013/1‑150 GCTGGTGGAACTGGCCGAGCGCCTGATCGGCAAGGGCTACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGCG > 2:87199/1‑150 GTGGAACTGGCCGAGCGCCTGATCGGCAAGGGCTACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGC > 1:756203/1‑145 GTGGAACTGGCCGAGCGCCTGATCGGCAAGGGCTACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGC < 2:756203/145‑1 ACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGCGATTCGTTGCTGCGCATCAGCGAGTCGAGCAGCGGTGCA > 2:390475/1‑150 GAATCGCAGGTGCAGAACGCCTTCGAGCTGATCGAAGCCCACGACAAGCGCAAGGTCGCCCTGCTGGGCCTGAGCTTCAAGGCCGGCACCGACGACCTGCGCGAAAGCCCGCTGGTGGAACTGGCCGAGCGCCTGATCGGCAAGGGCTACCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1473336‑1473183 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accagcGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGCGATTCGTTGCTGCGCATCAGCGAGTCGAGCAGCGGTGCA > NC_002947/1473227‑1473370 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |