New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1622692 =	69 (1.530)	6 (0.140)	6/234	NT	9.4%	coding (707/813 nt)	PP_1422	hypothetical protein
	?	NC_002947	1622719 =	51 (1.200)					coding (680/813 nt)	PP_1422	hypothetical protein

CCAGCCGGTGCTGGGGGACAAGATCCTCAAGGCCTGGGAGTTTCCGGAGCAGTTGGTCCACCTGCCGAGCCAGGTTCATGACCTGGACCGCCAGACTGACAAGATCGATTACATCGACATCGTGCAGATCGCCCGCTGCATCAGTCAGCGCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1622847‑1622692 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcgATCTGCACGATGTCGATGTAATCGATCTTGTCAGTCTGGCGGTCCAGGTCATGAACCTGGCTCGGCAGGTGGACCAACTGCTCCGGAAACTCCCAGGCCTTGAGGATCTTGTCCCCCAGCACCGGCTGGAGTTGCTCGATCACATAA  >  NC_002947/1622719‑1622865                                                                                                                                                                                                                                                                                                                 CCAGCCGGTGCTGGGGGACAAGATCCTCAAGGCCTGGGAGTTTCCGGAGCAGTTGGTCCACCTGCGGAGCCAGGTTCATGACCTGGACCGCCAGACTGACAAGATGGATTACATCGACATCGTGCAGATCGCCCGCTGCATCAGTCAGCG                                                                                                                                                           >  2:868516/1‑150  CAGCCGGTGCTGGGGGACAAGATCCTCAAGGAATGGGAGTTTCCGGAGCAGTTGGTCCACCTGCCGAGCCAGGTTCATGACCTGGACCGCCAGACTGACAAGATCGATTACATCGACATCGTGCAGATCGCCCGCTGCATCAGTCAGCGC                                                                                                                                                          >  1:1135984/1‑150                                                                                                                                ATCGCCCGCTGCATCAGTCAGCGCGGGCGATCTGCACGATGTCGATGTAATCGATCTTGTCAGTCTGGCGGTCCAGG                                                                                                     >  1:253151/1‑77                                                                                                                                ATCGCCCGCTGCATCAGTCAGCGCGGGCGATCTGCACGATGTCGATGTAATCGATCTTGTCAGTCTGGCGGTCCAGG                                                                                                     <  2:253151/77‑1                                                                                                                                 TCGCCCGCTGCATCAGTCAGCGCGGGCGATCTGCACGATGTCGATGTAATCGATCTTGTCAGTCTGGCGGTCCAGGTCATGAACCTGGCTCGGCAGGTGGAC                                                                           >  1:944986/1‑102                                                                                                                                 TCGCCCGCTGCATCAGTCAGCGCGGGCGATCTGCACGATGTCGATGTAATCGATCTTGTCAGTCTGGCGGTCCAGGTCATGAACCTGGCTCGGCAGGTGGAC                                                                           <  2:944986/102‑1                                                                                                                                  CGCCCGCTGCATCAGTCAGCGCGGGCGATCTGCACGATGTCGATGTAATCGATCTTGTCAGTCTGGCGGTCCAGGTCA                                                                                                  >  1:1172066/1‑78                                                                                                                                  CGCCCGCTGCATCAGTCAGCGCGGGCGATCTGCACGATGTCGATGTAATCGATCTTGTCAGTCTGGCGGTCCAGGTCA                                                                                                  <  2:1172066/78‑1                                                                                                                                                          GCGATCTGCACGATGTCGATGTAATCGATCTTGTCAGTCTGGCGGTCCAGGTCATGAACCTGGCTCGGCAGGTGGACCAACTGCTCCGGAAACTCCCAGGCCTTGAGGATCTTGTCCCCCAGCACCGGCTGGAGTTGCTCGATCACATAA  <  2:805197/150‑1                                                                                                                                                                                                                                                                                                                 CCAGCCGGTGCTGGGGGACAAGATCCTCAAGGCCTGGGAGTTTCCGGAGCAGTTGGTCCACCTGCCGAGCCAGGTTCATGACCTGGACCGCCAGACTGACAAGATCGATTACATCGACATCGTGCAGATCGCCCGCTGCATCAGTCAGCGCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1622847‑1622692 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcgATCTGCACGATGTCGATGTAATCGATCTTGTCAGTCTGGCGGTCCAGGTCATGAACCTGGCTCGGCAGGTGGACCAACTGCTCCGGAAACTCCCAGGCCTTGAGGATCTTGTCCCCCAGCACCGGCTGGAGTTGCTCGATCACATAA  >  NC_002947/1622719‑1622865

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.