New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 230347445 (1.000)5 (0.120) 4/234 NT 10.2% coding (1411/1632 nt) PP_2027 hypothetical protein
?NC_002947 = 2303493 46 (1.080)coding (1392/1632 nt) PP_2027 hypothetical protein

GGTACCAATCGCCCGCCACAAATCCTCCCCCTGCCAATACTGCCCGCTCTCGCTGTACAACGCCCCGTTCAAACCATCCAGCGCATCCGACAACGGCACGAAGCGCGCCGCCATCTCGGCCAGGGTTTCCGGTTGCTGCCGGGCCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2303325‑2303474
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccaggcTACGCGCCAGGCGCTGGATGCCTGGGCCCGGCAGCAACCGGAAACCCTGGCCGAGATGGCGGCGCGCTTCGTGCCGTTGTCGGATGCGCTGGATGGTTTGAACGGGGCGTTGTACAGCGAGAGCGGGCAGTATTGGCAGGGGGAGGATT  <  NC_002947/2303493‑2303345
                                                                                                                                                                                                                                                                                                           
GGTACCAATCGCCCGCCACAACCCCTCCCCCTGCCACTACTGCCCGCTCTCGCTGTACAACGCCCCGTTCAAACCATCCAGCGCATCCGACAACGGCACGAAGCGCGCCGCCATCTCGGCCAGGGTTTCCGGTTGCTGCCGGGCCCAGGC                                                                                                                                                       <  2:305019/150‑1
                             CCTGCCAATACTGCCCGCTCTCGCTGTACAACGCCCCGTTCAAACCATCCAGCGCATCCGACAACGGCACGAAGCGCGCCGCCATCTCGGCCAGGGTTTCCGGTTGCTGCCGGGCCCAGGCTACGCGCCAGGCGCTGGATGCCTGGGCCC                                                                                                                          <  2:846114/150‑1
                                                                CCGTTCAAACCATCCAGCGCATCCGACAACGGCACGAAGCGCGCCGCCATCTCGGCCAGGGTTTCCGGTTGCTGCCGGGCCCAGGCTACGCGCCAGGCGCTGGATGCCTGGGC                                                                                                                            <  1:250968/113‑1
                                                                CCGTTCAAACCATCCAGCGCATCCGACAACGGCACGAAGCGCGCCGCCATCTCGGCCAGGGTTTCCGGTTGCTGCCGGGCCCAGGCTACGCGCCAGGCGCTGGATGCCTGGGC                                                                                                                            >  2:250968/1‑113
                                                                                              GGCACGAAGCGCGCCGCCATCTCGGCCAGGGTTTCCGGTTGCTGCCGGGCCCAGGCTACGCGCCAGGCGCTGGATGCCTGGGCCC                                                                                                                          >  1:254592/1‑85
                                                                                              GGCACGAAGCGCGCCGCCATCTCGGCCAGGGTTTCCGGTTGCTGCCGGGCCCAGGCTACGCGCCAGGCGCTGGATGCCTGGGCCC                                                                                                                          <  2:254592/85‑1
                                                                                                                                                CCAGGCTACGCTCCAGGCGCTGGATGCCTGGGCCCGGCAGCAACCGGAAACCCTGGCCGAGATGGCGGCGCGCTTCGTGCCGTTGTCGGATGCGCTGGATGGTTTGAACGGGGCGTTGTACAGCGAGAGCGGGCAGTATTGGCAGGGGGA       <  1:51338/150‑1
                                                                                                                                                CCAGGCTACGCGCCAGGCGCTGGATGCCTGGGCCCGGCAGCAACCGGAAACCCTGGCCGAGATGGCGGCGCGCTTCGTGCCGTTGTCGGATGCGCTGGATGGTTTGAACGGGGCGTTGTACAGCGAGAGCGGGCAGTATTGGCAGGGGGA       <  2:1052439/150‑1
                                                                                                                                                 CAGGCTACGCGCCAGGCGCTGGATGCCTGGGCCCGGCAGCAACCGGAAACCCTGGCCGAGATGGCGGCGCGCTTCGTGCCGTTGTCGGATTCGCTGGATGGTTTGAACGGGGCGTTGCGATGGCAGAGCGGGCAGTATTGGCAGGGGGAG      <  1:337002/150‑1
                                                                                                                                                    GCTACGCGCCAGGCGCTGGATGCCTGGGCCCGGCAGCAACCGGAAACCCTGGCCGAGATGGCGGCGCGCTTCGTGCCGTTGTCGGATGCGCTGGATGGTTTGAACGGGGCGTTGTACAGCGAGAGCGGGCAGTATTGGCAGGGGGAGGAT   <  2:813130/150‑1
                                                                                                                                                     CTACGCGCCAGGCGCTGGATGCCTGGGCCCGGCAGCAACCGGAAACCCTGGCCGAGATGGCGGCGCGCTTCGTGCCGTTGTCGGATGCGCTGGATGGTTTGAACGGGGCGTTGTACAGCGAGAGCGGGCAGTATTGGCAGGGGGAGGATT  <  1:1023824/150‑1
                                                                                                                                                                                                                                                                                                           
GGTACCAATCGCCCGCCACAAATCCTCCCCCTGCCAATACTGCCCGCTCTCGCTGTACAACGCCCCGTTCAAACCATCCAGCGCATCCGACAACGGCACGAAGCGCGCCGCCATCTCGGCCAGGGTTTCCGGTTGCTGCCGGGCCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2303325‑2303474
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccaggcTACGCGCCAGGCGCTGGATGCCTGGGCCCGGCAGCAACCGGAAACCCTGGCCGAGATGGCGGCGCGCTTCGTGCCGTTGTCGGATGCGCTGGATGGTTTGAACGGGGCGTTGTACAGCGAGAGCGGGCAGTATTGGCAGGGGGAGGATT  <  NC_002947/2303493‑2303345

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.