| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3465854 | 52 (1.150) | 6 (0.140) | 6/240 | NT | 10.8% | intergenic (‑17/+230) | aroF‑II/PP_mr39 | tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase/P15 ncRNA |
| ? | NC_002947 | = 3465882 | 49 (1.120) | intergenic (‑45/+202) | aroF‑II/PP_mr39 | tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase/P15 ncRNA | |||||
CCTGGACTTGCTGGGCCAGTTCGCTGGGCAGTGGCATCTGCTGCTTGAGCAGGTGCGGGCTGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3465702‑3465854‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcCGACCATGCGGGCTTGAACCCGCTGTCCGCCCAGGGAAAAACGCCATGCACGCTTCCAGCCTCGCCCTGCCCCTGACCCAGCCGCAAGCGGCCAACACCACTGTCAGCAGACGCCTGCCCAGCCCGCACCTGCTCAAGCAGCAGATGC < NC_002947/3465882‑3465735 CCTGGACTTGCTGGGCCAGTTCGCTGGGCAGTGGCATCTGCTGCTTGAGCAGGTGCGGGCTGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTG > 1:809422/1‑150 CTGGACTTGCTGGGCCAGTTCGCTGGGCAGTGGCATCTGCTGCTTGAGCAGGTGCGGGCTGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCGGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGGTTTTCCCTGG > 2:83760/1‑150 TGGACTTGCTGGGCCAGTTCGCTGGGCAGTGGCATCTGCTGCTTGAGCAGGTGCGGGCTGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGG > 2:664682/1‑150 GGACTTGCTGGGCCAGTTCGCTGGGCAGTGGCATCTGCTGCTTGAGCAGGTGCGGGCTGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGC < 1:957845/150‑1 TGGGCAGTGGCATCTGCTGCTTGAGCAGGTGCGGGCTGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCCGACCATGCGGGCTTGAA > 1:1114962/1‑147 TGGGCAGTGGCATCTGCTGCTTGAGCAGGTGCGGGCTGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCCGACCATGCGGGCTTGAA < 2:1114962/147‑1 CAGTGGCATCTGCTGCTTGAGCAGGTGCGGGCTGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCCGACCATGCGGGCTTGAACCCGCTG > 1:385668/1‑150 CTGCTGCTTGAGCAGGTGCGGGCTGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCCGACCATGCGGGCTTGAACCCGCTGTCCGCCCAG < 2:385668/150‑1 CTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCCGACCATGCGGGCTTGAACCCGCTGTCCGCCCAGG > 1:474387/1‑88 CTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCCGACCATGCGGGCTTGAACCCGCTGTCCGCCCAGG < 2:474387/88‑1 GGCCGACCATGCGGGCTTGAACCCGCTGTCCGCCCAGGGAAAAACGCCATGCACGCTTCCAGCCTCGCCCTGCCCCTGACCCAGCCGCAAGCGGCCAACACCACTGTCAGCAGACGCCTGCCCAGCCCGCACCTGCTCAAGCAGCAGATG > 2:479422/1‑150 GCCGACCATGCGGGCGTGAACCCGCTGTCCGCCCAGGGAAAAACGCCATGCACGCTTCCAGCCTCGCCCTGCCCCTGACCCAGCCGCAAGCGGCCAACACCACTGTCAGCAGACGCCTGCCCAGCCCGCACCTGCTCAAGCAGCAGATGC < 2:842145/150‑1 CCTGGACTTGCTGGGCCAGTTCGCTGGGCAGTGGCATCTGCTGCTTGAGCAGGTGCGGGCTGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3465702‑3465854‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcCGACCATGCGGGCTTGAACCCGCTGTCCGCCCAGGGAAAAACGCCATGCACGCTTCCAGCCTCGCCCTGCCCCTGACCCAGCCGCAAGCGGCCAACACCACTGTCAGCAGACGCCTGCCCAGCCCGCACCTGCTCAAGCAGCAGATGC < NC_002947/3465882‑3465735 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |