| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3598659 | 25 (0.550) | 4 (0.090) | 4/242 | NT | 12.0% | coding (1089/1521 nt) | PP_3175 | ferredoxin reductase dioxygenase subunit |
| ? | NC_002947 | = 3598684 | 34 (0.770) | coding (1064/1521 nt) | PP_3175 | ferredoxin reductase dioxygenase subunit | |||||
CCACAAACCGTCAGCTGCGCGCATTTCTGCGTCGACCCTCACCGATTTGTCTTCGCCAAGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3598596‑3598659‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCCGCCACCGCGTTCCTTCAAGGCGTGCC < NC_002947/3598684‑3598657 CCACAAACCGTCAGCTGCGCGCATTTCTGCGTCGACCCTCACCGATTTGTCTTCGCCAAGCGGCCCGCCACCGCGTTCCTTCAAGGCGTGCC > 1:518911/1‑92CCACAAACCGTCAGCTGCGCGCATTTCTGCGTCGACCCTCACCGATTTGTCTTCGCCAAGCGGCCCGCCACCGCGTTCCTTCAAGGCGTGCC < 2:518911/92‑1 CAAACCGTCAGCTGCGCGCATTTCTGCGTCGACCCTCACCGATTTGTCTTCGCCAAGCGGCCCGCCACCGCGTTCCTTCAAGGCGT > 1:129568/1‑86 CAAACCGTCAGCTGCGCGCATTTCTGCGTCGACCCTCACCGATTTGTCTTCGCCAAGCGGCCCGCCACCGCGTTCCTTCAAGGCGT < 2:129568/86‑1 CCACAAACCGTCAGCTGCGCGCATTTCTGCGTCGACCCTCACCGATTTGTCTTCGCCAAGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3598596‑3598659‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCCGCCACCGCGTTCCTTCAAGGCGTGCC < NC_002947/3598684‑3598657 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |