New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4443120 | 45 (1.000) | 4 (0.090) | 4/238 | NT | 8.6% | coding (906/1314 nt) | nicT | metabolite transport protein NicT |
? | NC_002947 | = 4443151 | 42 (0.970) | coding (875/1314 nt) | nicT | metabolite transport protein NicT |
GCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4443065‑4443120 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccTGCTCACGGCCATTCCAAGCCTGGCCGCGCTGGCCGGCAT < NC_002947/4443151‑4443112 GCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCTGCTCACGGCCATTCCAAGCCTGGCCGCGCTGGCCGGCAT > 1:733153/1‑96 GCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCTGCTCACGGCCATTCCAAGCCTGGCCGCGCTGGCCGGCAT < 2:733153/96‑1 GGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCTGCTCACGGCCATTCCAAGCCTGGCCGCGCTGGCCGGC < 1:559660/73‑1 GGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCTGCTCACGGCCATTCCAAGCCTGGCCGCGCTGGCCGGC > 2:559660/1‑73 GCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4443065‑4443120 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccTGCTCACGGCCATTCCAAGCCTGGCCGCGCTGGCCGGCAT < NC_002947/4443151‑4443112 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |