| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4845110 = | 60 (1.330) | 4 (0.090) | 4/232 | NT | 6.8% | coding (482/531 nt) | PP_4260 | hypothetical protein |
| ? | NC_002947 | 4845141 = | 53 (1.260) | coding (513/531 nt) | PP_4260 | hypothetical protein | |||||
TGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGGGATTTGCGGTGTTGCTACTGTTGGTGTTCGGCGCCTTGCAGGGCTTCGTCACCCAACTGCAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4845262‑4845110‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcaaggCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGATAGCTCAG > NC_002947/4845141‑4845212 TGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGGGATTTGCGGTGTTGCTACTGTTGGTGTTCGGCGCCTTGCAGGGCTTCGTCACCCAACTGCA > 1:227047/1‑150 TGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGGGATTTGCGGTGTTGCTACTGTTGGTGTTCGGCGCCTTGCAGGGCTTCGTCACCCAACTGCAAG < 1:447716/150‑1 TGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGGGATTTGCGGTGTTGCTACTGTTGGTGTTCGGCGCCTTGCAGGGCTTCGTCACCCAACTGCAAG < 1:238581/101‑1 TGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGGGATTTGCGGTGTTGCTACTGTTGGTGTTCGGCGCCTTGCAGGGCTTCGTCACCCAACTGCAAG > 2:238581/1‑101 CCTTGCAGGGCTTCGTCACCCAACTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTG < 1:754216/70‑1 CCTTGCAGGGCTTCGTCACCCAACTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTG > 2:754216/1‑70 CTTGCAGGGCTTCGTCACCCAACTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGATAGCTCAG > 1:295843/1‑102 CTTGCAGGGCTTCGTCACCCAACTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGATAGCTCAG < 2:295843/102‑1 TGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGGGATTTGCGGTGTTGCTACTGTTGGTGTTCGGCGCCTTGCAGGGCTTCGTCACCCAACTGCAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4845262‑4845110‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcaaggCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGATAGCTCAG > NC_002947/4845141‑4845212 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |